RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 HRNRQ86YZ3 2850 aaPredicted RBP0.58□□□□□ -2.32
ATM-208ENST00000525537 SPTA1P02549 2419 aa0.57□□□□□ -2.32
ATM-208ENST00000525537 HIVEP3Q5T1R4 2406 aa0.57□□□□□ -2.32
ATM-208ENST00000525537 PTPN23Q9H3S7 1636 aa0.57□□□□□ -2.32
ATM-208ENST00000525537 PTPN13Q12923 2485 aa0.57□□□□□ -2.32
ATM-208ENST00000525537 PKD1L1Q8TDX9 2849 aa0.56□□□□□ -2.32
ATM-208ENST00000525537 LCE6AA0A183 80 aa0.56□□□□□ -2.32
ATM-208ENST00000525537 HMGA1P17096 107 aaKnown RBP0.56□□□□□ -2.32
ATM-208ENST00000525537 ABCA2Q9BZC7 2435 aa0.56□□□□□ -2.32
ATM-208ENST00000525537 PREX1Q8TCU6 1659 aa0.56□□□□□ -2.32
ATM-208ENST00000525537 TIAM2Q8IVF5 1701 aa0.55□□□□□ -2.32
ATM-208ENST00000525537 DOT1LQ8TEK3 1739 aa0.55□□□□□ -2.32
ATM-208ENST00000525537 HUWE1Q7Z6Z7 4374 aaKnown RBP0.54□□□□□ -2.32
ATM-208ENST00000525537 NDUFA3O95167 84 aa0.54□□□□□ -2.32
ATM-208ENST00000525537 COX6B2Q6YFQ2 88 aa0.54□□□□□ -2.32
ATM-208ENST00000525537 RGPD8O14715 1765 aaPredicted RBP0.54□□□□□ -2.32
ATM-208ENST00000525537 RGPD5Q99666 1765 aa0.54□□□□□ -2.32
ATM-208ENST00000525537 CD163L1Q9NR16 1453 aa0.54□□□□□ -2.32
ATM-208ENST00000525537 FAT2Q9NYQ8 4349 aa0.53□□□□□ -2.32
ATM-208ENST00000525537 NDUFA4O00483 81 aa0.53□□□□□ -2.32
ATM-208ENST00000525537 DEFA5Q01523 94 aa0.53□□□□□ -2.32
ATM-208ENST00000525537 WFDC13Q8IUB5 93 aa0.53□□□□□ -2.32
ATM-208ENST00000525537 PDCD5O14737 125 aa0.52□□□□□ -2.33
ATM-208ENST00000525537 CCDC88BA6NC98 1476 aa0.52□□□□□ -2.33
ATM-208ENST00000525537 LOC730098B7Z3J9 87 aa0.51□□□□□ -2.33
ATM-208ENST00000525537 H3BVH4 76 aa0.51□□□□□ -2.33
ATM-208ENST00000525537 NWD1Q149M9 1564 aa0.51□□□□□ -2.33
ATM-208ENST00000525537 ARFGEF2Q9Y6D5 1785 aa0.51□□□□□ -2.33
ATM-208ENST00000525537 CNOT1A5YKK6 2376 aaKnown RBP0.5□□□□□ -2.33
ATM-208ENST00000525537 UGGT2Q9NYU1 1516 aa0.5□□□□□ -2.33
ATM-208ENST00000525537 PRM1P04553 51 aa0.5□□□□□ -2.33
ATM-208ENST00000525537 LRRIQ1Q96JM4 1722 aa0.5□□□□□ -2.33
ATM-208ENST00000525537 SCN11AQ9UI33 1791 aa0.49□□□□□ -2.33
ATM-208ENST00000525537 REV3LO60673 3130 aa0.49□□□□□ -2.33
ATM-208ENST00000525537 MDN1Q9NU22 5596 aa0.48□□□□□ -2.33
ATM-208ENST00000525537 BSNQ9UPA5 3926 aa0.48□□□□□ -2.33
ATM-208ENST00000525537 MUC5ACP98088 5654 aa0.48□□□□□ -2.33
ATM-208ENST00000525537 ANKRD50Q9ULJ7 1429 aa0.47□□□□□ -2.33
ATM-208ENST00000525537 TNXBP22105 4242 aa0.47□□□□□ -2.33
ATM-208ENST00000525537 IQGAP3Q86VI3 1631 aa0.47□□□□□ -2.33
ATM-208ENST00000525537 MYO5CQ9NQX4 1742 aa0.46□□□□□ -2.34
ATM-208ENST00000525537 TNRC6CQ9HCJ0 1690 aaKnown RBP0.46□□□□□ -2.34
ATM-208ENST00000525537 DUOX2Q9NRD8 1548 aa0.45□□□□□ -2.34
ATM-208ENST00000525537 MACF1Q9UPN3 7388 aaKnown RBP0.45□□□□□ -2.34
ATM-208ENST00000525537 DMBT1Q9UGM3 2413 aaPredicted RBP0.44□□□□□ -2.34
ATM-208ENST00000525537 CHD8Q9HCK8 2581 aa0.44□□□□□ -2.34
ATM-208ENST00000525537 HILPDAQ9Y5L2 63 aa0.44□□□□□ -2.34
ATM-208ENST00000525537 MYCBP2O75592 4640 aa0.44□□□□□ -2.34
ATM-208ENST00000525537 LMTK2Q8IWU2 1503 aa0.43□□□□□ -2.34
ATM-208ENST00000525537 CACNA1AO00555 2505 aa0.43□□□□□ -2.34
ATM-208ENST00000525537 PRO3102Q9H379 93 aa0.43□□□□□ -2.34
ATM-208ENST00000525537 KMT2AQ03164 3969 aa0.43□□□□□ -2.34
ATM-208ENST00000525537 PRKDCP78527 4128 aaKnown RBP0.43□□□□□ -2.34
ATM-208ENST00000525537 CFAP43Q8NDM7 1665 aa0.43□□□□□ -2.34
ATM-208ENST00000525537 NESP48681 1621 aa0.42□□□□□ -2.34
ATM-208ENST00000525537 RICTORQ6R327 1708 aa0.41□□□□□ -2.34
ATM-208ENST00000525537 LPAP08519 4548 aa0.4□□□□□ -2.34
ATM-208ENST00000525537 SYNE2Q8WXH0 6885 aaKnown RBP0.4□□□□□ -2.35
ATM-208ENST00000525537 M0R2T5 61 aa0.4□□□□□ -2.35
ATM-208ENST00000525537 C3orf79P0CE67 100 aa0.4□□□□□ -2.35
ATM-208ENST00000525537 FSIP2Q5CZC0 6907 aa0.39□□□□□ -2.35
ATM-208ENST00000525537 LINC00158P58513 81 aa0.39□□□□□ -2.35
ATM-208ENST00000525537 ENHOQ6UWT2 76 aa0.39□□□□□ -2.35
ATM-208ENST00000525537 PLCH1Q4KWH8 1693 aa0.38□□□□□ -2.35
ATM-208ENST00000525537 DIP2AQ14689 1571 aa0.38□□□□□ -2.35
ATM-208ENST00000525537 ATXN8Q156A1 80 aa0.38□□□□□ -2.35
ATM-208ENST00000525537 EP300Q09472 2414 aaPredicted RBP0.37□□□□□ -2.35
ATM-208ENST00000525537 CDC42BPGQ6DT37 1551 aa0.37□□□□□ -2.35
ATM-208ENST00000525537 EIF2AK4Q9P2K8 1649 aaKnown RBP0.37□□□□□ -2.35
ATM-208ENST00000525537 KNL1Q8NG31 2342 aa0.37□□□□□ -2.35
ATM-208ENST00000525537 RALGAPBQ86X10 1494 aa0.36□□□□□ -2.35
ATM-208ENST00000525537 COL7A1Q02388 2944 aa0.36□□□□□ -2.35
ATM-208ENST00000525537 ASXL1Q8IXJ9 1541 aa0.35□□□□□ -2.35
ATM-208ENST00000525537 SPRR2DP22532 72 aa0.35□□□□□ -2.35
ATM-208ENST00000525537 GNG13Q9P2W3 67 aa0.35□□□□□ -2.35
ATM-208ENST00000525537 NEBP20929 6669 aa0.35□□□□□ -2.35
ATM-208ENST00000525537 DNMBPQ6XZF7 1577 aa0.35□□□□□ -2.35
ATM-208ENST00000525537 WNK1Q9H4A3 2382 aa0.34□□□□□ -2.35
ATM-208ENST00000525537 DEFB131BA0A096LNP1 70 aa0.34□□□□□ -2.36
ATM-208ENST00000525537 H0YAA0 97 aa0.34□□□□□ -2.36
ATM-208ENST00000525537 C4AP0C0L4 1744 aa0.34□□□□□ -2.36
ATM-208ENST00000525537 C4BP0C0L5 1744 aa0.34□□□□□ -2.36
ATM-208ENST00000525537 DEFB135Q30KP9 77 aa0.34□□□□□ -2.36
ATM-208ENST00000525537 UBL5Q9BZL1 73 aa0.34□□□□□ -2.36
ATM-208ENST00000525537 KCNQ1DNQ9H478 68 aa0.34□□□□□ -2.36
ATM-208ENST00000525537 ALMS1Q8TCU4 4167 aa0.34□□□□□ -2.36
ATM-208ENST00000525537 MAP1BP46821 2468 aaKnown RBP0.33□□□□□ -2.36
ATM-208ENST00000525537 HFM1A2PYH4 1435 aa0.33□□□□□ -2.36
ATM-208ENST00000525537 DSTQ03001 7570 aaKnown RBP0.33□□□□□ -2.36
ATM-208ENST00000525537 HMCN2Q8NDA2 5059 aa0.32□□□□□ -2.36
ATM-208ENST00000525537 KMT2DO14686 5537 aa0.32□□□□□ -2.36
ATM-208ENST00000525537 ADAMTS12P58397 1594 aa0.32□□□□□ -2.36
ATM-208ENST00000525537 CICQ96RK0 1608 aaPredicted RBP0.31□□□□□ -2.36
ATM-208ENST00000525537 SETXQ7Z333 2677 aaKnown RBP0.31□□□□□ -2.36
ATM-208ENST00000525537 TRANK1O15050 2925 aa0.3□□□□□ -2.36
ATM-208ENST00000525537 DCHS2Q6V1P9 2916 aa0.3□□□□□ -2.36
ATM-208ENST00000525537 HSPG2P98160 4391 aa0.3□□□□□ -2.36
ATM-208ENST00000525537 MRPL33O75394 65 aaKnown RBP0.3□□□□□ -2.36
ATM-208ENST00000525537 WIZO95785 1651 aa0.3□□□□□ -2.36
ATM-208ENST00000525537 FLNCQ14315 2725 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms