RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 AEBP2Q6ZN18 517 aaPredicted RBP26.37■■□□□ 1.81
ATM-208ENST00000525537 CHIC1Q5VXU3 224 aa24.59■■□□□ 1.53
ATM-208ENST00000525537 SENP3Q9H4L4 574 aaPredicted RBP22.56■■□□□ 1.2
ATM-208ENST00000525537 PHF23Q9BUL5 403 aaPredicted RBP22.18■■□□□ 1.14
ATM-208ENST00000525537 FOXD1Q16676 465 aa21.12■□□□□ 0.97
ATM-208ENST00000525537 POTEDQ86YR6 584 aa20.55■□□□□ 0.88
ATM-208ENST00000525537 MSH5O43196 834 aa19.97■□□□□ 0.79
ATM-208ENST00000525537 PIAS4Q8N2W9 510 aaPredicted RBP19.57■□□□□ 0.72
ATM-208ENST00000525537 PPP6R1Q9UPN7 881 aa19.29■□□□□ 0.68
ATM-208ENST00000525537 PLPPR3Q6T4P5 718 aa19.23■□□□□ 0.67
ATM-208ENST00000525537 ADRA2BP18089 450 aa19.17■□□□□ 0.66
ATM-208ENST00000525537 DMRT2Q9Y5R5 561 aa17.81■□□□□ 0.44
ATM-208ENST00000525537 MAPK8IP2Q13387 824 aaPredicted RBP17.8■□□□□ 0.44
ATM-208ENST00000525537 SCAF1Q9H7N4 1312 aaKnown RBP17.51■□□□□ 0.39
ATM-208ENST00000525537 CACNB1Q02641 598 aaPredicted RBP17.5■□□□□ 0.39
ATM-208ENST00000525537 DCAF8L1A6NGE4 600 aa17.07■□□□□ 0.32
ATM-208ENST00000525537 RNF39Q9H2S5 420 aa17.01■□□□□ 0.31
ATM-208ENST00000525537 HOXD11P31277 338 aaPredicted RBP16.91■□□□□ 0.3
ATM-208ENST00000525537 PPP4R3CPQ6ZMV5 832 aa16.78■□□□□ 0.28
ATM-208ENST00000525537 C1QBPQ07021 282 aaKnown RBP16.71■□□□□ 0.27
ATM-208ENST00000525537 CNKSR2Q8WXI2 1034 aa16.61■□□□□ 0.25
ATM-208ENST00000525537 RNF216Q9NWF9 866 aaPredicted RBP16.61■□□□□ 0.25
ATM-208ENST00000525537 DNAJC5BQ9UF47 199 aa16.46■□□□□ 0.23
ATM-208ENST00000525537 KCNA4P22459 653 aa16.44■□□□□ 0.22
ATM-208ENST00000525537 EHMT2Q96KQ7 1210 aa16.37■□□□□ 0.21
ATM-208ENST00000525537 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.08■□□□□ 0.16
ATM-208ENST00000525537 POTEHQ6S545 545 aa15.98■□□□□ 0.15
ATM-208ENST00000525537 NCBP3Q53F19 620 aaKnown RBP15.93■□□□□ 0.14
ATM-208ENST00000525537 SLC4A1APQ9BWU0 796 aaKnown RBP15.82■□□□□ 0.12
ATM-208ENST00000525537 CSRNP3Q8WYN3 585 aa15.8■□□□□ 0.12
ATM-208ENST00000525537 NPM3O75607 178 aaKnown RBP15.73■□□□□ 0.11
ATM-208ENST00000525537 DSG3P32926 999 aa15.72■□□□□ 0.11
ATM-208ENST00000525537 U3KPZ7 1027 aaPredicted RBP15.71■□□□□ 0.11
ATM-208ENST00000525537 SPINK5Q9NQ38 1064 aaPredicted RBP15.66■□□□□ 0.1
ATM-208ENST00000525537 CAPN15O75808 1086 aa15.64■□□□□ 0.09
ATM-208ENST00000525537 ABCB7O75027 752 aa15.24■□□□□ 0.03
ATM-208ENST00000525537 TRHP20396 242 aaPredicted RBP15.24■□□□□ 0.03
ATM-208ENST00000525537 ZNF219Q9P2Y4 722 aaPredicted RBP15.2■□□□□ 0.02
ATM-208ENST00000525537 SLC4A2P04920 1241 aa15.19■□□□□ 0.02
ATM-208ENST00000525537 APLP2Q06481 763 aa15.16■□□□□ 0.02
ATM-208ENST00000525537 ZBTB22O15209 634 aa15.15■□□□□ 0.02
ATM-208ENST00000525537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.01□□□□□ -0.01
ATM-208ENST00000525537 HNRNPUL2Q1KMD3 747 aaKnown RBP15.01□□□□□ -0.01
ATM-208ENST00000525537 RBM42Q9BTD8 480 aaKnown RBP14.99□□□□□ -0.01
ATM-208ENST00000525537 CHRDL2Q6WN34 429 aa14.92□□□□□ -0.02
ATM-208ENST00000525537 SAMD1Q6SPF0 538 aaPredicted RBP14.91□□□□□ -0.02
ATM-208ENST00000525537 FOXD4L1Q9NU39 408 aa14.89□□□□□ -0.03
ATM-208ENST00000525537 POLA2Q14181 598 aa14.7□□□□□ -0.06
ATM-208ENST00000525537 SP7Q8TDD2 431 aaPredicted RBP14.69□□□□□ -0.06
ATM-208ENST00000525537 SLC24A1O60721 1099 aa14.59□□□□□ -0.07
ATM-208ENST00000525537 MYCNP04198 464 aaPredicted RBP14.55□□□□□ -0.08
ATM-208ENST00000525537 AMER1Q5JTC6 1135 aaPredicted RBP14.55□□□□□ -0.08
ATM-208ENST00000525537 AKT1S1Q96B36 256 aa14.53□□□□□ -0.08
ATM-208ENST00000525537 RTN4Q9NQC3 1192 aaKnown RBP14.53□□□□□ -0.08
ATM-208ENST00000525537 PIP4P2Q8N4L2 257 aa14.44□□□□□ -0.1
ATM-208ENST00000525537 REM2Q8IYK8 340 aaPredicted RBP14.4□□□□□ -0.1
ATM-208ENST00000525537 ZBTB12Q9Y330 459 aaPredicted RBP14.34□□□□□ -0.11
ATM-208ENST00000525537 HAX1O00165 279 aa14.32□□□□□ -0.12
ATM-208ENST00000525537 ATXN8OSP0DMR3 200 aa14.31□□□□□ -0.12
ATM-208ENST00000525537 ATF5Q9Y2D1 282 aaPredicted RBP14.29□□□□□ -0.12
ATM-208ENST00000525537 FXR2P51116 673 aaKnown RBP eCLIP14.27□□□□□ -0.139e-8■□□□□ 10.3
ATM-208ENST00000525537 OSCARQ8IYS5 282 aa14.27□□□□□ -0.13
ATM-208ENST00000525537 PITPNM1O00562 1244 aa14.26□□□□□ -0.13
ATM-208ENST00000525537 FKBP8Q14318 412 aa14.21□□□□□ -0.13
ATM-208ENST00000525537 EVX2Q03828 476 aa14.14□□□□□ -0.15
ATM-208ENST00000525537 PRKAR2AP13861 404 aaKnown RBP13.87□□□□□ -0.19
ATM-208ENST00000525537 SPDYE2BA6NHP3 402 aa13.86□□□□□ -0.19
ATM-208ENST00000525537 SPDYE6P0CI01 402 aa13.86□□□□□ -0.19
ATM-208ENST00000525537 SPDYE2Q495Y8 402 aa13.86□□□□□ -0.19
ATM-208ENST00000525537 C19orf67A6NJJ6 358 aa13.83□□□□□ -0.2
ATM-208ENST00000525537 LHX8Q68G74 356 aa13.77□□□□□ -0.21
ATM-208ENST00000525537 GABBR2O75899 941 aa13.76□□□□□ -0.21
ATM-208ENST00000525537 SPDYE1Q8NFV5 336 aaPredicted RBP13.76□□□□□ -0.21
ATM-208ENST00000525537 CLEC11AQ9Y240 323 aa13.76□□□□□ -0.21
ATM-208ENST00000525537 FBLN2P98095 1184 aa13.72□□□□□ -0.21
ATM-208ENST00000525537 SSUH2Q9Y2M2 353 aa13.63□□□□□ -0.23
ATM-208ENST00000525537 MKRN4PQ13434 485 aaPredicted RBP13.6□□□□□ -0.23
ATM-208ENST00000525537 CHADLQ6NUI6 762 aa13.59□□□□□ -0.23
ATM-208ENST00000525537 ZNF692Q9BU19 519 aaPredicted RBP13.59□□□□□ -0.23
ATM-208ENST00000525537 POTEIP0CG38 1075 aa13.49□□□□□ -0.25
ATM-208ENST00000525537 FBXO3Q9UK99 471 aa13.49□□□□□ -0.25
ATM-208ENST00000525537 PRR29P0C7W0 189 aa13.45□□□□□ -0.26
ATM-208ENST00000525537 CD44P16070 742 aaKnown RBP13.39□□□□□ -0.27
ATM-208ENST00000525537 PLCB2Q00722 1185 aa13.39□□□□□ -0.27
ATM-208ENST00000525537 PABPN1Q86U42 306 aaKnown RBP eCLIP13.37□□□□□ -0.27
ATM-208ENST00000525537 PLSCR2Q9NRY7 297 aa13.37□□□□□ -0.27
ATM-208ENST00000525537 SPDYE4A6NLX3 237 aa13.35□□□□□ -0.27
ATM-208ENST00000525537 CLCN6P51797 869 aa13.32□□□□□ -0.28
ATM-208ENST00000525537 FARP1Q9Y4F1 1045 aaPredicted RBP13.32□□□□□ -0.28
ATM-208ENST00000525537 PROM2Q8N271 834 aa13.3□□□□□ -0.28
ATM-208ENST00000525537 VASPP50552 380 aaPredicted RBP13.27□□□□□ -0.29
ATM-208ENST00000525537 DCBLD2Q96PD2 775 aa13.24□□□□□ -0.29
ATM-208ENST00000525537 ZNF579Q8NAF0 562 aaKnown RBP13.18□□□□□ -0.3
ATM-208ENST00000525537 HAP1P54257 671 aaPredicted RBP13.17□□□□□ -0.3
ATM-208ENST00000525537 IFNLR1Q8IU57 520 aaPredicted RBP13.16□□□□□ -0.3
ATM-208ENST00000525537 DCAF8L2P0C7V8 631 aa13.11□□□□□ -0.31
ATM-208ENST00000525537 ZRANB1Q9UGI0 708 aa13.11□□□□□ -0.31
ATM-208ENST00000525537 OTUD5Q96G74 571 aa13.1□□□□□ -0.31
ATM-208ENST00000525537 PKD2Q13563 968 aa13.07□□□□□ -0.32
ATM-208ENST00000525537 BCANQ96GW7 911 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms