RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 NDUFA4O00483 81 aa1.29□□□□□ -2.2
LDHBP3-201ENST00000514909 SPINK1P00995 79 aa1.29□□□□□ -2.2
LDHBP3-201ENST00000514909 TPRP12270 2363 aaKnown RBP1.29□□□□□ -2.2
LDHBP3-201ENST00000514909 ABCA9Q8IUA7 1624 aa1.29□□□□□ -2.2
LDHBP3-201ENST00000514909 WIZO95785 1651 aa1.29□□□□□ -2.2
LDHBP3-201ENST00000514909 COL6A3P12111 3177 aa1.29□□□□□ -2.2
LDHBP3-201ENST00000514909 SPINK4O60575 86 aa1.28□□□□□ -2.2
LDHBP3-201ENST00000514909 TNRC6CQ9HCJ0 1690 aaKnown RBP1.28□□□□□ -2.2
LDHBP3-201ENST00000514909 MADDQ8WXG6 1647 aa1.26□□□□□ -2.21
LDHBP3-201ENST00000514909 PIEZO1Q92508 2521 aa1.26□□□□□ -2.21
LDHBP3-201ENST00000514909 H1FX-AS1Q4G0G2 97 aa1.26□□□□□ -2.21
LDHBP3-201ENST00000514909 FXYD6Q9H0Q3 95 aa1.26□□□□□ -2.21
LDHBP3-201ENST00000514909 HILPDAQ9Y5L2 63 aa1.26□□□□□ -2.21
LDHBP3-201ENST00000514909 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
LDHBP3-201ENST00000514909 ATXN8Q156A1 80 aa1.25□□□□□ -2.21
LDHBP3-201ENST00000514909 DIP2AQ14689 1571 aa1.25□□□□□ -2.21
LDHBP3-201ENST00000514909 NHSQ6T4R5 1651 aa1.24□□□□□ -2.21
LDHBP3-201ENST00000514909 CDKN2A-AS1Q9UH64 79 aa1.24□□□□□ -2.21
LDHBP3-201ENST00000514909 INO80Q9ULG1 1556 aaPredicted RBP1.24□□□□□ -2.21
LDHBP3-201ENST00000514909 KRTAP5-10Q6L8G5 202 aa1.23□□□□□ -2.21
LDHBP3-201ENST00000514909 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.23□□□□□ -2.21
LDHBP3-201ENST00000514909 KLK9Q2XQG4 91 aa1.22□□□□□ -2.21
LDHBP3-201ENST00000514909 UBR4Q5T4S7 5183 aa1.22□□□□□ -2.21
LDHBP3-201ENST00000514909 RALGAPBQ86X10 1494 aa1.21□□□□□ -2.22
LDHBP3-201ENST00000514909 SPTBN1Q01082 2364 aaKnown RBP1.2□□□□□ -2.22
LDHBP3-201ENST00000514909 A0A087WWC5 75 aa1.19□□□□□ -2.22
LDHBP3-201ENST00000514909 LELP1Q5T871 98 aa1.19□□□□□ -2.22
LDHBP3-201ENST00000514909 DDX60LQ5H9U9 1706 aaKnown RBP1.18□□□□□ -2.22
LDHBP3-201ENST00000514909 GNG13Q9P2W3 67 aa1.18□□□□□ -2.22
LDHBP3-201ENST00000514909 U3KQA8 63 aa1.17□□□□□ -2.22
LDHBP3-201ENST00000514909 HFM1A2PYH4 1435 aa1.16□□□□□ -2.22
LDHBP3-201ENST00000514909 NRAPQ86VF7 1730 aa1.16□□□□□ -2.22
LDHBP3-201ENST00000514909 NDUFA3O95167 84 aa1.16□□□□□ -2.22
LDHBP3-201ENST00000514909 PKDREJQ9NTG1 2253 aa1.15□□□□□ -2.22
LDHBP3-201ENST00000514909 ENHOQ6UWT2 76 aa1.15□□□□□ -2.23
LDHBP3-201ENST00000514909 CNOT1A5YKK6 2376 aaKnown RBP1.13□□□□□ -2.23
LDHBP3-201ENST00000514909 KCNQ1DNQ9H478 68 aa1.13□□□□□ -2.23
LDHBP3-201ENST00000514909 CCDC180Q9P1Z9 1646 aa1.13□□□□□ -2.23
LDHBP3-201ENST00000514909 WFDC13Q8IUB5 93 aa1.12□□□□□ -2.23
LDHBP3-201ENST00000514909 AHNAKQ09666 5890 aaKnown RBP1.12□□□□□ -2.23
LDHBP3-201ENST00000514909 GVINP1Q7Z2Y8 2422 aa1.11□□□□□ -2.23
LDHBP3-201ENST00000514909 AKAP6Q13023 2319 aa1.11□□□□□ -2.23
LDHBP3-201ENST00000514909 UBL5Q9BZL1 73 aa1.11□□□□□ -2.23
LDHBP3-201ENST00000514909 C4AP0C0L4 1744 aa1.11□□□□□ -2.23
LDHBP3-201ENST00000514909 C4BP0C0L5 1744 aa1.11□□□□□ -2.23
LDHBP3-201ENST00000514909 RNF17Q9BXT8 1623 aaKnown RBP1.11□□□□□ -2.23
LDHBP3-201ENST00000514909 TJP1Q07157 1748 aa1.1□□□□□ -2.23
LDHBP3-201ENST00000514909 PCLOQ9Y6V0 5065 aa1.1□□□□□ -2.23
LDHBP3-201ENST00000514909 DEFB131BA0A096LNP1 70 aa1.1□□□□□ -2.23
LDHBP3-201ENST00000514909 STAB1Q9NY15 2570 aa1.1□□□□□ -2.23
LDHBP3-201ENST00000514909 C3orf79P0CE67 100 aa1.09□□□□□ -2.23
LDHBP3-201ENST00000514909 KRTAP21-1Q3LI58 79 aa1.09□□□□□ -2.23
LDHBP3-201ENST00000514909 TRANK1O15050 2925 aa1.09□□□□□ -2.23
LDHBP3-201ENST00000514909 TEP1Q99973 2627 aaKnown RBP1.09□□□□□ -2.24
LDHBP3-201ENST00000514909 THOC2Q8NI27 1593 aaKnown RBP1.08□□□□□ -2.24
LDHBP3-201ENST00000514909 MRPL33O75394 65 aaKnown RBP1.08□□□□□ -2.24
LDHBP3-201ENST00000514909 PRO3102Q9H379 93 aa1.08□□□□□ -2.24
LDHBP3-201ENST00000514909 MACF1Q9UPN3 7388 aaKnown RBP1.08□□□□□ -2.24
LDHBP3-201ENST00000514909 MUC2Q02817 5179 aa1.08□□□□□ -2.24
LDHBP3-201ENST00000514909 TENM4Q6N022 2769 aa1.08□□□□□ -2.24
LDHBP3-201ENST00000514909 KIAA1109Q2LD37 5005 aa1.07□□□□□ -2.24
LDHBP3-201ENST00000514909 AHNAK2Q8IVF2 5795 aa1.06□□□□□ -2.24
LDHBP3-201ENST00000514909 VWFP04275 2813 aa1.05□□□□□ -2.24
LDHBP3-201ENST00000514909 S100ZQ8WXG8 99 aa1.05□□□□□ -2.24
LDHBP3-201ENST00000514909 PLXNC1O60486 1568 aa1.03□□□□□ -2.24
LDHBP3-201ENST00000514909 DEPDC5O75140 1603 aa1.02□□□□□ -2.25
LDHBP3-201ENST00000514909 LINC00158P58513 81 aa1.02□□□□□ -2.25
LDHBP3-201ENST00000514909 OTOGQ6ZRI0 2925 aa1.02□□□□□ -2.25
LDHBP3-201ENST00000514909 TIAM1Q13009 1591 aa1.01□□□□□ -2.25
LDHBP3-201ENST00000514909 DEFB114Q30KQ6 69 aa1.01□□□□□ -2.25
LDHBP3-201ENST00000514909 PTPN13Q12923 2485 aa1□□□□□ -2.25
LDHBP3-201ENST00000514909 ABCA2Q9BZC7 2435 aa1□□□□□ -2.25
LDHBP3-201ENST00000514909 ZFYVE26Q68DK2 2539 aa0.99□□□□□ -2.25
LDHBP3-201ENST00000514909 LINC01549A6NIU2 74 aa0.99□□□□□ -2.25
LDHBP3-201ENST00000514909 MUC5BQ9HC84 5762 aaPredicted RBP0.98□□□□□ -2.25
LDHBP3-201ENST00000514909 LRP1Q07954 4544 aaKnown RBP0.98□□□□□ -2.25
LDHBP3-201ENST00000514909 NCOR1O75376 2440 aa0.98□□□□□ -2.25
LDHBP3-201ENST00000514909 FAT2Q9NYQ8 4349 aa0.98□□□□□ -2.25
LDHBP3-201ENST00000514909 BSNQ9UPA5 3926 aa0.98□□□□□ -2.25
LDHBP3-201ENST00000514909 ABCA6Q8N139 1617 aa0.98□□□□□ -2.25
LDHBP3-201ENST00000514909 ETDCA0A1B0GVM5 59 aa0.98□□□□□ -2.25
LDHBP3-201ENST00000514909 TENM3Q9P273 2699 aa0.98□□□□□ -2.25
LDHBP3-201ENST00000514909 SYNE2Q8WXH0 6885 aaKnown RBP0.98□□□□□ -2.25
LDHBP3-201ENST00000514909 SETD2Q9BYW2 2564 aaPredicted RBP0.97□□□□□ -2.25
LDHBP3-201ENST00000514909 CHD6Q8TD26 2715 aa0.97□□□□□ -2.25
LDHBP3-201ENST00000514909 IGF2RP11717 2491 aa0.97□□□□□ -2.25
LDHBP3-201ENST00000514909 C3P01024 1663 aa0.97□□□□□ -2.25
LDHBP3-201ENST00000514909 BPTFQ12830 3046 aa0.97□□□□□ -2.25
LDHBP3-201ENST00000514909 SYNE1Q8NF91 8797 aaKnown RBP0.96□□□□□ -2.26
LDHBP3-201ENST00000514909 H0YAA0 97 aa0.96□□□□□ -2.26
LDHBP3-201ENST00000514909 HUWE1Q7Z6Z7 4374 aaKnown RBP0.95□□□□□ -2.26
LDHBP3-201ENST00000514909 ANKHD1Q8IWZ3 2542 aaKnown RBP0.94□□□□□ -2.26
LDHBP3-201ENST00000514909 NCOR2Q9Y618 2525 aa0.94□□□□□ -2.26
LDHBP3-201ENST00000514909 REV3LO60673 3130 aa0.94□□□□□ -2.26
LDHBP3-201ENST00000514909 MAST4O15021 2626 aa0.94□□□□□ -2.26
LDHBP3-201ENST00000514909 WNK2Q9Y3S1 2297 aa0.94□□□□□ -2.26
LDHBP3-201ENST00000514909 ABCC6O95255 1503 aa0.94□□□□□ -2.26
LDHBP3-201ENST00000514909 NEBP20929 6669 aa0.93□□□□□ -2.26
LDHBP3-201ENST00000514909 LYNX1G3V0Z9 82 aa0.93□□□□□ -2.26
LDHBP3-201ENST00000514909 SFTA3P0C7M3 94 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms