RNA–Protein interactions for RNA: ENST00000474281.1

PGK1-202, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 1 (best)

Gene PGK1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-202ENST00000474281 WFDC9Q8NEX5 89 aa0.48□□□□□ -2.33
PGK1-202ENST00000474281 FXYD6Q9H0Q3 95 aa0.48□□□□□ -2.33
PGK1-202ENST00000474281 APLNQ9ULZ1 77 aa0.48□□□□□ -2.33
PGK1-202ENST00000474281 MYCBP2O75592 4640 aa0.47□□□□□ -2.33
PGK1-202ENST00000474281 PTPN13Q12923 2485 aa0.47□□□□□ -2.33
PGK1-202ENST00000474281 HIVEP3Q5T1R4 2406 aa0.47□□□□□ -2.33
PGK1-202ENST00000474281 MYO5CQ9NQX4 1742 aa0.47□□□□□ -2.33
PGK1-202ENST00000474281 CCL22O00626 93 aa0.47□□□□□ -2.33
PGK1-202ENST00000474281 MUC5ACP98088 5654 aa0.47□□□□□ -2.33
PGK1-202ENST00000474281 NWD1Q149M9 1564 aa0.47□□□□□ -2.33
PGK1-202ENST00000474281 ABCA2Q9BZC7 2435 aa0.47□□□□□ -2.33
PGK1-202ENST00000474281 ANKARQ7Z5J8 1434 aa0.47□□□□□ -2.33
PGK1-202ENST00000474281 TNXBP22105 4242 aa0.46□□□□□ -2.34
PGK1-202ENST00000474281 SPINK4O60575 86 aa0.46□□□□□ -2.34
PGK1-202ENST00000474281 RPL38P63173 70 aaKnown RBP0.46□□□□□ -2.34
PGK1-202ENST00000474281 KLK9Q2XQG4 91 aa0.46□□□□□ -2.34
PGK1-202ENST00000474281 TRANK1O15050 2925 aa0.46□□□□□ -2.34
PGK1-202ENST00000474281 PLCH1Q4KWH8 1693 aa0.46□□□□□ -2.34
PGK1-202ENST00000474281 PHGR1C9JFL3 82 aa0.45□□□□□ -2.34
PGK1-202ENST00000474281 CCDC88BA6NC98 1476 aa0.45□□□□□ -2.34
PGK1-202ENST00000474281 IQGAP3Q86VI3 1631 aa0.45□□□□□ -2.34
PGK1-202ENST00000474281 C4AP0C0L4 1744 aa0.44□□□□□ -2.34
PGK1-202ENST00000474281 C4BP0C0L5 1744 aa0.44□□□□□ -2.34
PGK1-202ENST00000474281 H1FX-AS1Q4G0G2 97 aa0.44□□□□□ -2.34
PGK1-202ENST00000474281 C18orf32Q8TCD1 76 aa0.44□□□□□ -2.34
PGK1-202ENST00000474281 AHNAK2Q8IVF2 5795 aa0.43□□□□□ -2.34
PGK1-202ENST00000474281 RICTORQ6R327 1708 aa0.43□□□□□ -2.34
PGK1-202ENST00000474281 PARP4Q9UKK3 1724 aaKnown RBP0.43□□□□□ -2.34
PGK1-202ENST00000474281 DDX60LQ5H9U9 1706 aaKnown RBP0.42□□□□□ -2.34
PGK1-202ENST00000474281 IFI6P09912 130 aa0.42□□□□□ -2.34
PGK1-202ENST00000474281 DCHS2Q6V1P9 2916 aa0.42□□□□□ -2.34
PGK1-202ENST00000474281 EIF2AK4Q9P2K8 1649 aaKnown RBP0.41□□□□□ -2.34
PGK1-202ENST00000474281 CD163L1Q9NR16 1453 aa0.41□□□□□ -2.34
PGK1-202ENST00000474281 CHD8Q9HCK8 2581 aa0.41□□□□□ -2.34
PGK1-202ENST00000474281 KNL1Q8NG31 2342 aa0.41□□□□□ -2.34
PGK1-202ENST00000474281 UMAD1C9J7I0 102 aa0.4□□□□□ -2.35
PGK1-202ENST00000474281 BPTFQ12830 3046 aa0.39□□□□□ -2.35
PGK1-202ENST00000474281 SMIM13P0DJ93 91 aa0.39□□□□□ -2.35
PGK1-202ENST00000474281 LELP1Q5T871 98 aa0.39□□□□□ -2.35
PGK1-202ENST00000474281 CICQ96RK0 1608 aaPredicted RBP0.38□□□□□ -2.35
PGK1-202ENST00000474281 CACNA1AO00555 2505 aa0.38□□□□□ -2.35
PGK1-202ENST00000474281 SETXQ7Z333 2677 aaKnown RBP0.38□□□□□ -2.35
PGK1-202ENST00000474281 A0A087WXM4 84 aa0.38□□□□□ -2.35
PGK1-202ENST00000474281 LCE6AA0A183 80 aa0.38□□□□□ -2.35
PGK1-202ENST00000474281 IFI27P40305 119 aaPredicted RBP0.38□□□□□ -2.35
PGK1-202ENST00000474281 HEPN1Q6WQI6 88 aa0.38□□□□□ -2.35
PGK1-202ENST00000474281 UGGT2Q9NYU1 1516 aa0.38□□□□□ -2.35
PGK1-202ENST00000474281 WIZO95785 1651 aa0.37□□□□□ -2.35
PGK1-202ENST00000474281 NREPQ16612 68 aa0.37□□□□□ -2.35
PGK1-202ENST00000474281 COX6B2Q6YFQ2 88 aa0.37□□□□□ -2.35
PGK1-202ENST00000474281 CDKN2A-AS1Q9UH64 79 aa0.37□□□□□ -2.35
PGK1-202ENST00000474281 COL7A1Q02388 2944 aa0.37□□□□□ -2.35
PGK1-202ENST00000474281 LPAP08519 4548 aa0.36□□□□□ -2.35
PGK1-202ENST00000474281 ALMS1Q8TCU4 4167 aa0.36□□□□□ -2.35
PGK1-202ENST00000474281 TJP1Q07157 1748 aa0.35□□□□□ -2.35
PGK1-202ENST00000474281 ITSN1Q15811 1721 aa0.35□□□□□ -2.35
PGK1-202ENST00000474281 PRM1P04553 51 aa0.35□□□□□ -2.35
PGK1-202ENST00000474281 HMGA1P17096 107 aaKnown RBP0.35□□□□□ -2.35
PGK1-202ENST00000474281 WNK1Q9H4A3 2382 aa0.35□□□□□ -2.35
PGK1-202ENST00000474281 DMBT1Q9UGM3 2413 aaPredicted RBP0.35□□□□□ -2.35
PGK1-202ENST00000474281 FSIP2Q5CZC0 6907 aa0.34□□□□□ -2.35
PGK1-202ENST00000474281 EP300Q09472 2414 aaPredicted RBP0.34□□□□□ -2.35
PGK1-202ENST00000474281 SYNE2Q8WXH0 6885 aaKnown RBP0.34□□□□□ -2.35
PGK1-202ENST00000474281 LOC730098B7Z3J9 87 aa0.34□□□□□ -2.36
PGK1-202ENST00000474281 ADAMTS12P58397 1594 aa0.34□□□□□ -2.36
PGK1-202ENST00000474281 MAP1BP46821 2468 aaKnown RBP0.33□□□□□ -2.36
PGK1-202ENST00000474281 NRAPQ86VF7 1730 aa0.33□□□□□ -2.36
PGK1-202ENST00000474281 ANKRD50Q9ULJ7 1429 aa0.33□□□□□ -2.36
PGK1-202ENST00000474281 WFDC13Q8IUB5 93 aa0.33□□□□□ -2.36
PGK1-202ENST00000474281 NDUFA3O95167 84 aa0.32□□□□□ -2.36
PGK1-202ENST00000474281 FLNCQ14315 2725 aa0.32□□□□□ -2.36
PGK1-202ENST00000474281 NDUFA4O00483 81 aa0.31□□□□□ -2.36
PGK1-202ENST00000474281 LMTK2Q8IWU2 1503 aa0.31□□□□□ -2.36
PGK1-202ENST00000474281 SMCO4Q9NRQ5 59 aa0.3□□□□□ -2.36
PGK1-202ENST00000474281 AKAP13Q12802 2813 aa0.3□□□□□ -2.36
PGK1-202ENST00000474281 ZC3H13Q5T200 1668 aaKnown RBP0.3□□□□□ -2.36
PGK1-202ENST00000474281 PLXNC1O60486 1568 aa0.29□□□□□ -2.36
PGK1-202ENST00000474281 HMCN2Q8NDA2 5059 aa0.29□□□□□ -2.36
PGK1-202ENST00000474281 RNF17Q9BXT8 1623 aaKnown RBP0.29□□□□□ -2.36
PGK1-202ENST00000474281 FLNAP21333 2647 aaKnown RBP0.29□□□□□ -2.36
PGK1-202ENST00000474281 KMT2DO14686 5537 aa0.29□□□□□ -2.36
PGK1-202ENST00000474281 PDE4DIPQ5VU43 2346 aa0.29□□□□□ -2.36
PGK1-202ENST00000474281 CDC42BPGQ6DT37 1551 aa0.28□□□□□ -2.36
PGK1-202ENST00000474281 ABCA9Q8IUA7 1624 aa0.28□□□□□ -2.36
PGK1-202ENST00000474281 HECTD4Q9Y4D8 3996 aa0.28□□□□□ -2.36
PGK1-202ENST00000474281 SPRR2DP22532 72 aa0.28□□□□□ -2.36
PGK1-202ENST00000474281 APC2O95996 2303 aa0.28□□□□□ -2.36
PGK1-202ENST00000474281 DSPP15924 2871 aaKnown RBP0.28□□□□□ -2.36
PGK1-202ENST00000474281 MACF1Q9UPN3 7388 aaKnown RBP0.28□□□□□ -2.36
PGK1-202ENST00000474281 NHSQ6T4R5 1651 aa0.27□□□□□ -2.37
PGK1-202ENST00000474281 PRRC2CQ9Y520 2896 aaKnown RBP0.27□□□□□ -2.37
PGK1-202ENST00000474281 DUOX2Q9NRD8 1548 aa0.27□□□□□ -2.37
PGK1-202ENST00000474281 DNMBPQ6XZF7 1577 aa0.27□□□□□ -2.37
PGK1-202ENST00000474281 M0R2T5 61 aa0.26□□□□□ -2.37
PGK1-202ENST00000474281 PDCD5O14737 125 aa0.26□□□□□ -2.37
PGK1-202ENST00000474281 DEPDC5O75140 1603 aa0.25□□□□□ -2.37
PGK1-202ENST00000474281 THOC2Q8NI27 1593 aaKnown RBP0.25□□□□□ -2.37
PGK1-202ENST00000474281 MAP1AP78559 2803 aaPredicted RBP0.25□□□□□ -2.37
PGK1-202ENST00000474281 HSPG2P98160 4391 aa0.25□□□□□ -2.37
PGK1-202ENST00000474281 TENM2Q9NT68 2774 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms