RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 RYR1P21817 5038 aa0.18□□□□□ -2.38
GPNMB-205ENST00000463011 HRNRQ86YZ3 2850 aaPredicted RBP0.18□□□□□ -2.38
GPNMB-205ENST00000463011 SMIM13P0DJ93 91 aa0.17□□□□□ -2.38
GPNMB-205ENST00000463011 SPRR2DP22532 72 aa0.17□□□□□ -2.38
GPNMB-205ENST00000463011 DOT1LQ8TEK3 1739 aa0.16□□□□□ -2.38
GPNMB-205ENST00000463011 CFAP74Q9C0B2 1584 aa0.16□□□□□ -2.38
GPNMB-205ENST00000463011 M0R2T5 61 aa0.16□□□□□ -2.38
GPNMB-205ENST00000463011 NDUFA3O95167 84 aa0.16□□□□□ -2.38
GPNMB-205ENST00000463011 VWFP04275 2813 aa0.16□□□□□ -2.38
GPNMB-205ENST00000463011 NCOR1O75376 2440 aa0.16□□□□□ -2.38
GPNMB-205ENST00000463011 MAST4O15021 2626 aa0.16□□□□□ -2.38
GPNMB-205ENST00000463011 UBR4Q5T4S7 5183 aa0.16□□□□□ -2.38
GPNMB-205ENST00000463011 CHD6Q8TD26 2715 aa0.15□□□□□ -2.38
GPNMB-205ENST00000463011 NWD1Q149M9 1564 aa0.15□□□□□ -2.38
GPNMB-205ENST00000463011 RYR2Q92736 4967 aa0.15□□□□□ -2.38
GPNMB-205ENST00000463011 TNRC6CQ9HCJ0 1690 aaKnown RBP0.15□□□□□ -2.39
GPNMB-205ENST00000463011 TNXBP22105 4242 aa0.15□□□□□ -2.39
GPNMB-205ENST00000463011 IFI27P40305 119 aaPredicted RBP0.15□□□□□ -2.39
GPNMB-205ENST00000463011 NREPQ16612 68 aa0.15□□□□□ -2.39
GPNMB-205ENST00000463011 PTPN13Q12923 2485 aa0.14□□□□□ -2.39
GPNMB-205ENST00000463011 RGPD8O14715 1765 aaPredicted RBP0.14□□□□□ -2.39
GPNMB-205ENST00000463011 RGPD5Q99666 1765 aa0.14□□□□□ -2.39
GPNMB-205ENST00000463011 COX6B2Q6YFQ2 88 aa0.14□□□□□ -2.39
GPNMB-205ENST00000463011 C18orf32Q8TCD1 76 aa0.14□□□□□ -2.39
GPNMB-205ENST00000463011 CACNA1AO00555 2505 aa0.14□□□□□ -2.39
GPNMB-205ENST00000463011 SPTBN4Q9H254 2564 aa0.13□□□□□ -2.39
GPNMB-205ENST00000463011 TIAM2Q8IVF5 1701 aa0.13□□□□□ -2.39
GPNMB-205ENST00000463011 SPRR2GQ9BYE4 73 aa0.13□□□□□ -2.39
GPNMB-205ENST00000463011 ABCA2Q9BZC7 2435 aa0.13□□□□□ -2.39
GPNMB-205ENST00000463011 CELSR1Q9NYQ6 3014 aa0.12□□□□□ -2.39
GPNMB-205ENST00000463011 ARFGEF2Q9Y6D5 1785 aa0.12□□□□□ -2.39
GPNMB-205ENST00000463011 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.12□□□□□ -2.39
GPNMB-205ENST00000463011 ANKARQ7Z5J8 1434 aa0.12□□□□□ -2.39
GPNMB-205ENST00000463011 UBR5O95071 2799 aaPredicted RBP0.11□□□□□ -2.39
GPNMB-205ENST00000463011 CCDC88BA6NC98 1476 aa0.11□□□□□ -2.39
GPNMB-205ENST00000463011 IGSF10Q6WRI0 2623 aa0.11□□□□□ -2.39
GPNMB-205ENST00000463011 NDUFA4O00483 81 aa0.11□□□□□ -2.39
GPNMB-205ENST00000463011 DEFB135Q30KP9 77 aa0.11□□□□□ -2.39
GPNMB-205ENST00000463011 NESP48681 1621 aa0.11□□□□□ -2.39
GPNMB-205ENST00000463011 COL6A3P12111 3177 aa0.11□□□□□ -2.39
GPNMB-205ENST00000463011 CSPG4Q6UVK1 2322 aa0.1□□□□□ -2.39
GPNMB-205ENST00000463011 LCE6AA0A183 80 aa0.1□□□□□ -2.39
GPNMB-205ENST00000463011 STAB1Q9NY15 2570 aa0.1□□□□□ -2.39
GPNMB-205ENST00000463011 MAP3K1Q13233 1512 aa0.09□□□□□ -2.39
GPNMB-205ENST00000463011 ABCA8O94911 1581 aa0.09□□□□□ -2.4
GPNMB-205ENST00000463011 PTPN23Q9H3S7 1636 aa0.09□□□□□ -2.4
GPNMB-205ENST00000463011 DMBT1Q9UGM3 2413 aaPredicted RBP0.08□□□□□ -2.4
GPNMB-205ENST00000463011 RNF213Q63HN8 5207 aa0.08□□□□□ -2.4
GPNMB-205ENST00000463011 C4AP0C0L4 1744 aa0.08□□□□□ -2.4
GPNMB-205ENST00000463011 C4BP0C0L5 1744 aa0.08□□□□□ -2.4
GPNMB-205ENST00000463011 CFAP43Q8NDM7 1665 aa0.08□□□□□ -2.4
GPNMB-205ENST00000463011 MYCBP2O75592 4640 aa0.07□□□□□ -2.4
GPNMB-205ENST00000463011 PRO3102Q9H379 93 aa0.07□□□□□ -2.4
GPNMB-205ENST00000463011 HUWE1Q7Z6Z7 4374 aaKnown RBP0.07□□□□□ -2.4
GPNMB-205ENST00000463011 HMGA1P17096 107 aaKnown RBP0.06□□□□□ -2.4
GPNMB-205ENST00000463011 EP300Q09472 2414 aaPredicted RBP0.06□□□□□ -2.4
GPNMB-205ENST00000463011 PLCH1Q4KWH8 1693 aa0.05□□□□□ -2.4
GPNMB-205ENST00000463011 CD163L1Q9NR16 1453 aa0.05□□□□□ -2.4
GPNMB-205ENST00000463011 DEFA5Q01523 94 aa0.05□□□□□ -2.4
GPNMB-205ENST00000463011 ADAMTS12P58397 1594 aa0.05□□□□□ -2.4
GPNMB-205ENST00000463011 CICQ96RK0 1608 aaPredicted RBP0.05□□□□□ -2.4
GPNMB-205ENST00000463011 RICTORQ6R327 1708 aa0.04□□□□□ -2.4
GPNMB-205ENST00000463011 ATRQ13535 2644 aa0.04□□□□□ -2.4
GPNMB-205ENST00000463011 SPTA1P02549 2419 aa0.04□□□□□ -2.4
GPNMB-205ENST00000463011 KIAA1109Q2LD37 5005 aa0.04□□□□□ -2.4
GPNMB-205ENST00000463011 H3BVH4 76 aa0.04□□□□□ -2.4
GPNMB-205ENST00000463011 C3orf79P0CE67 100 aa0.04□□□□□ -2.4
GPNMB-205ENST00000463011 LINC00158P58513 81 aa0.04□□□□□ -2.4
GPNMB-205ENST00000463011 LPAP08519 4548 aa0.04□□□□□ -2.4
GPNMB-205ENST00000463011 SPRR2BP35325 72 aa0.03□□□□□ -2.4
GPNMB-205ENST00000463011 SCN11AQ9UI33 1791 aa0.03□□□□□ -2.4
GPNMB-205ENST00000463011 HMCN2Q8NDA2 5059 aa0.03□□□□□ -2.41
GPNMB-205ENST00000463011 ANKRD50Q9ULJ7 1429 aa0.03□□□□□ -2.41
GPNMB-205ENST00000463011 PKD1L1Q8TDX9 2849 aa0.02□□□□□ -2.41
GPNMB-205ENST00000463011 COL7A1Q02388 2944 aa0.02□□□□□ -2.41
GPNMB-205ENST00000463011 FAT2Q9NYQ8 4349 aa0.02□□□□□ -2.41
GPNMB-205ENST00000463011 LMTK2Q8IWU2 1503 aa0.02□□□□□ -2.41
GPNMB-205ENST00000463011 LRRIQ1Q96JM4 1722 aa0.01□□□□□ -2.41
GPNMB-205ENST00000463011 HSPG2P98160 4391 aa0.01□□□□□ -2.41
GPNMB-205ENST00000463011 PLXNC1O60486 1568 aa0□□□□□ -2.41
GPNMB-205ENST00000463011 IQGAP3Q86VI3 1631 aa0□□□□□ -2.41
GPNMB-205ENST00000463011 ALMS1Q8TCU4 4167 aa0□□□□□ -2.41
GPNMB-205ENST00000463011 EIF2AK4Q9P2K8 1649 aaKnown RBP0□□□□□ -2.41
GPNMB-205ENST00000463011 DDX60LQ5H9U9 1706 aaKnown RBP-0.01□□□□□ -2.41
GPNMB-205ENST00000463011 MYO5CQ9NQX4 1742 aa-0.01□□□□□ -2.41
GPNMB-205ENST00000463011 UGGT2Q9NYU1 1516 aa-0.01□□□□□ -2.41
GPNMB-205ENST00000463011 H0YAA0 97 aa-0.01□□□□□ -2.41
GPNMB-205ENST00000463011 SMCO4Q9NRQ5 59 aa-0.01□□□□□ -2.41
GPNMB-205ENST00000463011 KMT2AQ03164 3969 aa-0.01□□□□□ -2.41
GPNMB-205ENST00000463011 WIZO95785 1651 aa-0.02□□□□□ -2.41
GPNMB-205ENST00000463011 HFM1A2PYH4 1435 aa-0.02□□□□□ -2.41
GPNMB-205ENST00000463011 FLNCQ14315 2725 aa-0.02□□□□□ -2.41
GPNMB-205ENST00000463011 CHD8Q9HCK8 2581 aa-0.02□□□□□ -2.41
GPNMB-205ENST00000463011 H0YGG7 62 aa-0.02□□□□□ -2.41
GPNMB-205ENST00000463011 HIVEP1P15822 2718 aa-0.02□□□□□ -2.41
GPNMB-205ENST00000463011 RALGAPBQ86X10 1494 aa-0.03□□□□□ -2.41
GPNMB-205ENST00000463011 CNOT1A5YKK6 2376 aaKnown RBP-0.03□□□□□ -2.41
GPNMB-205ENST00000463011 RYR3Q15413 4870 aa-0.04□□□□□ -2.42
GPNMB-205ENST00000463011 DEPDC5O75140 1603 aa-0.04□□□□□ -2.42
GPNMB-205ENST00000463011 ENHOQ6UWT2 76 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms