RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 TOMM5Q8N4H5 51 aa1.55□□□□□ -2.16
CCDC50-203ENST00000460064 A0A0G2JMZ2 1700 aa1.54□□□□□ -2.16
CCDC50-203ENST00000460064 PLXNB2O15031 1838 aa1.54□□□□□ -2.16
CCDC50-203ENST00000460064 PIEZO1Q92508 2521 aa1.54□□□□□ -2.16
CCDC50-203ENST00000460064 PRH1P02810 166 aa1.54□□□□□ -2.16
CCDC50-203ENST00000460064 MUC3AQ02505 3323 aa1.54□□□□□ -2.16
CCDC50-203ENST00000460064 LMO7Q8WWI1 1683 aa1.54□□□□□ -2.16
CCDC50-203ENST00000460064 CHD8Q9HCK8 2581 aa1.53□□□□□ -2.16
CCDC50-203ENST00000460064 MKI67P46013 3256 aaKnown RBP1.53□□□□□ -2.16
CCDC50-203ENST00000460064 CPSF4LA6NMK7 179 aaKnown RBP1.53□□□□□ -2.16
CCDC50-203ENST00000460064 TECTAO75443 2155 aa1.53□□□□□ -2.16
CCDC50-203ENST00000460064 ASCC3Q8N3C0 2202 aaKnown RBP1.53□□□□□ -2.16
CCDC50-203ENST00000460064 C4AP0C0L4 1744 aa1.52□□□□□ -2.17
CCDC50-203ENST00000460064 NMES1Q9C002 83 aa1.52□□□□□ -2.17
CCDC50-203ENST00000460064 CMC2Q9NRP2 79 aa1.52□□□□□ -2.17
CCDC50-203ENST00000460064 BRCA2P51587 3418 aa1.52□□□□□ -2.17
CCDC50-203ENST00000460064 C4BP0C0L5 1744 aa1.52□□□□□ -2.17
CCDC50-203ENST00000460064 RANBP2P49792 3224 aaKnown RBP1.51□□□□□ -2.17
CCDC50-203ENST00000460064 UBE2DNLQ8IWF7 75 aa1.51□□□□□ -2.17
CCDC50-203ENST00000460064 KCNQ1DNQ9H478 68 aa1.51□□□□□ -2.17
CCDC50-203ENST00000460064 LAMA3Q16787 3333 aa1.5□□□□□ -2.17
CCDC50-203ENST00000460064 ANKRD36CQ5JPF3 1778 aa1.5□□□□□ -2.17
CCDC50-203ENST00000460064 LRRC37AA6NMS7 1700 aa1.5□□□□□ -2.17
CCDC50-203ENST00000460064 IGIPA6NJ69 53 aa1.5□□□□□ -2.17
CCDC50-203ENST00000460064 K7EIL1 84 aa1.5□□□□□ -2.17
CCDC50-203ENST00000460064 M0R1W7 72 aa1.5□□□□□ -2.17
CCDC50-203ENST00000460064 CRIPTQ9P021 101 aa1.5□□□□□ -2.17
CCDC50-203ENST00000460064 ASXL3Q9C0F0 2248 aa1.5□□□□□ -2.17
CCDC50-203ENST00000460064 TTC28Q96AY4 2481 aa1.49□□□□□ -2.17
CCDC50-203ENST00000460064 CENPFP49454 3210 aa1.49□□□□□ -2.17
CCDC50-203ENST00000460064 DEFB114Q30KQ6 69 aa1.49□□□□□ -2.17
CCDC50-203ENST00000460064 EYSQ5T1H1 3165 aa1.49□□□□□ -2.17
CCDC50-203ENST00000460064 TOGARAM1Q9Y4F4 1720 aa1.49□□□□□ -2.17
CCDC50-203ENST00000460064 SETXQ7Z333 2677 aaKnown RBP1.48□□□□□ -2.17
CCDC50-203ENST00000460064 LAMA2P24043 3122 aaKnown RBP1.48□□□□□ -2.17
CCDC50-203ENST00000460064 ETDCA0A1B0GVM5 59 aa1.48□□□□□ -2.17
CCDC50-203ENST00000460064 I3L3M4 83 aa1.48□□□□□ -2.17
CCDC50-203ENST00000460064 ROS1P08922 2347 aa1.48□□□□□ -2.17
CCDC50-203ENST00000460064 FBN3Q75N90 2809 aa1.47□□□□□ -2.17
CCDC50-203ENST00000460064 SPTY2D1-AS1A0A0U1RR47 76 aa1.47□□□□□ -2.17
CCDC50-203ENST00000460064 USP34Q70CQ2 3546 aa1.47□□□□□ -2.17
CCDC50-203ENST00000460064 PRUNE2Q8WUY3 3088 aa1.47□□□□□ -2.17
CCDC50-203ENST00000460064 TNCP24821 2201 aa1.46□□□□□ -2.18
CCDC50-203ENST00000460064 CFAP47Q6ZTR5 3102 aa1.46□□□□□ -2.18
CCDC50-203ENST00000460064 TRANK1O15050 2925 aa1.46□□□□□ -2.18
CCDC50-203ENST00000460064 ZDBF2Q9HCK1 2354 aa1.46□□□□□ -2.18
CCDC50-203ENST00000460064 SMIM27A0A1W2PRY6 76 aa1.46□□□□□ -2.18
CCDC50-203ENST00000460064 I3L2K1 104 aa1.46□□□□□ -2.18
CCDC50-203ENST00000460064 COX6B1P14854 86 aa1.46□□□□□ -2.18
CCDC50-203ENST00000460064 CRIP1P50238 77 aa1.46□□□□□ -2.18
CCDC50-203ENST00000460064 RPL38P63173 70 aaKnown RBP1.46□□□□□ -2.18
CCDC50-203ENST00000460064 ABRACLQ9P1F3 81 aa1.46□□□□□ -2.18
CCDC50-203ENST00000460064 CEP290O15078 2479 aa1.46□□□□□ -2.18
CCDC50-203ENST00000460064 C5orf42Q9H799 3197 aa1.46□□□□□ -2.18
CCDC50-203ENST00000460064 BDP1A6H8Y1 2624 aa1.46□□□□□ -2.18
CCDC50-203ENST00000460064 EPG5Q9HCE0 2579 aa1.46□□□□□ -2.18
CCDC50-203ENST00000460064 CFAP54Q96N23 3096 aa1.45□□□□□ -2.18
CCDC50-203ENST00000460064 ZNF292O60281 2723 aa1.45□□□□□ -2.18
CCDC50-203ENST00000460064 KRTAP4-1Q9BYQ7 146 aa1.45□□□□□ -2.18
CCDC50-203ENST00000460064 DDX60LQ5H9U9 1706 aaKnown RBP1.45□□□□□ -2.18
CCDC50-203ENST00000460064 MAST4O15021 2626 aa1.44□□□□□ -2.18
CCDC50-203ENST00000460064 CHD6Q8TD26 2715 aa1.44□□□□□ -2.18
CCDC50-203ENST00000460064 DEFB131BA0A096LNP1 70 aa1.44□□□□□ -2.18
CCDC50-203ENST00000460064 PLNP26678 52 aa1.44□□□□□ -2.18
CCDC50-203ENST00000460064 SERF2P84101 59 aa1.44□□□□□ -2.18
CCDC50-203ENST00000460064 ASH1LQ9NR48 2969 aaKnown RBP1.44□□□□□ -2.18
CCDC50-203ENST00000460064 ANKRD11Q6UB99 2663 aaPredicted RBP1.44□□□□□ -2.18
CCDC50-203ENST00000460064 FLNBO75369 2602 aaKnown RBP1.44□□□□□ -2.18
CCDC50-203ENST00000460064 TENM1Q9UKZ4 2725 aa1.44□□□□□ -2.18
CCDC50-203ENST00000460064 HTTP42858 3142 aa1.44□□□□□ -2.18
CCDC50-203ENST00000460064 FASNP49327 2511 aaKnown RBP1.43□□□□□ -2.18
CCDC50-203ENST00000460064 DCHS1Q96JQ0 3298 aa1.43□□□□□ -2.18
CCDC50-203ENST00000460064 FAM208AQ9UK61 1670 aaKnown RBP1.43□□□□□ -2.18
CCDC50-203ENST00000460064 TP53AIP1Q9HCN2 124 aa1.43□□□□□ -2.18
CCDC50-203ENST00000460064 ZNF462Q96JM2 2506 aa1.42□□□□□ -2.18
CCDC50-203ENST00000460064 ANKRD17O75179 2603 aaKnown RBP1.42□□□□□ -2.18
CCDC50-203ENST00000460064 CDH23Q9H251 3354 aa1.42□□□□□ -2.18
CCDC50-203ENST00000460064 K7EQZ3 153 aa1.42□□□□□ -2.18
CCDC50-203ENST00000460064 C10orf95Q9H7T3 257 aa1.42□□□□□ -2.18
CCDC50-203ENST00000460064 FAM208BQ5VWN6 2430 aa1.42□□□□□ -2.18
CCDC50-203ENST00000460064 URB1O60287 2271 aaKnown RBP1.42□□□□□ -2.18
CCDC50-203ENST00000460064 USP9XQ93008 2570 aaPredicted RBP1.42□□□□□ -2.18
CCDC50-203ENST00000460064 REV3LO60673 3130 aa1.42□□□□□ -2.18
CCDC50-203ENST00000460064 PTPRZ1P23471 2315 aaPredicted RBP1.41□□□□□ -2.18
CCDC50-203ENST00000460064 DNAH14Q0VDD8 3507 aa1.41□□□□□ -2.18
CCDC50-203ENST00000460064 WDFY4Q6ZS81 3184 aa1.41□□□□□ -2.18
CCDC50-203ENST00000460064 NFAT5O94916 1531 aa1.41□□□□□ -2.18
CCDC50-203ENST00000460064 XIRP2A4UGR9 3374 aa1.41□□□□□ -2.18
CCDC50-203ENST00000460064 LINC01546A6NGU7 62 aa1.41□□□□□ -2.18
CCDC50-203ENST00000460064 ACACBO00763 2458 aa1.41□□□□□ -2.18
CCDC50-203ENST00000460064 SPTBN4Q9H254 2564 aa1.41□□□□□ -2.18
CCDC50-203ENST00000460064 ASPMQ8IZT6 3477 aa1.4□□□□□ -2.19
CCDC50-203ENST00000460064 GCN1Q92616 2671 aaKnown RBP1.4□□□□□ -2.19
CCDC50-203ENST00000460064 NAV2Q8IVL1 2488 aa1.4□□□□□ -2.19
CCDC50-203ENST00000460064 MRPL34Q9BQ48 92 aaKnown RBP1.4□□□□□ -2.19
CCDC50-203ENST00000460064 CDKN2A-AS1Q9UH64 79 aa1.4□□□□□ -2.19
CCDC50-203ENST00000460064 NCOR2Q9Y618 2525 aa1.4□□□□□ -2.19
CCDC50-203ENST00000460064 KNTC1P50748 2209 aa1.4□□□□□ -2.19
CCDC50-203ENST00000460064 TPRP12270 2363 aaKnown RBP1.4□□□□□ -2.19
CCDC50-203ENST00000460064 MYO15AQ9UKN7 3530 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms