RNA–Protein interactions for RNA: ENSMUST00000205694.1

Rnf40-202, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf40, Length 5,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-202ENSMUST00000205694 Timm21Q8CCM6 249 aa10.86□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Hist1h2bkQ8CGP1 126 aaKnown RBP10.86□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Hist1h2bpQ8CGP2 126 aaKnown RBP10.86□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Obox1Q9D350 204 aa10.86□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Dock4P59764 1978 aa10.86□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Ighv14-1A0A075B5R4 117 aa10.86□□□□□ -0.67
Rnf40-202ENSMUST00000205694 AvpP35455 168 aa10.86□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Prpf8Q99PV0 2335 aaKnown RBP10.85□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Trbv31A0A075B5J5 111 aa10.85□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Hils1Q9QYL0 170 aa10.85□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Ighv1-36A0A0A6YXT2 117 aa10.85□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Gm7489Q3UT34 171 aa10.85□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Stpg1Q9D2F5 341 aa10.85□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Slc25a39Q9D8K8 359 aa10.85□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Pradc1Q9D9N8 188 aa10.85□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Spink1P09036 80 aa10.85□□□□□ -0.67
Rnf40-202ENSMUST00000205694 5730522E02RikQ5SP45 163 aa10.85□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Pmaip1Q9JM54 103 aa10.85□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Igkv6-23A0A140T8N5 115 aa10.85□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Igkv4-51A0N8I8 119 aa10.85□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Snx22Q8C084 192 aa10.85□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Sap30O88574 220 aa10.84□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Pygo1Q9D0P5 417 aa10.84□□□□□ -0.67
Rnf40-202ENSMUST00000205694 P01736 120 aa10.84□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Olfr1402Q8VET1 320 aa10.84□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Sec11aQ9R0P6 179 aa10.84□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Gm19410A0A140LJC7 2098 aa10.84□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Rpl36aP83882 106 aaKnown RBP10.84□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Trav2Q5R1I9 109 aa10.84□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Slc25a47Q6IS41 310 aa10.84□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Gm4763Q8CFJ5 196 aa10.84□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Cd5lQ9QWK4 352 aa10.84□□□□□ -0.67
Rnf40-202ENSMUST00000205694 Rnf126Q91YL2 313 aa10.83□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Mfap4Q9D1H9 257 aa10.83□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Defa20Q45VN2 95 aa10.83□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Gtsf1lQ9CWD0 151 aa10.83□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Gm7075D3Z497 112 aa10.83□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Slamf6Q9ET39 351 aa10.83□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Cox6a1P43024 111 aa10.83□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Jpt2Q6PGH2 190 aaKnown RBP10.83□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Tomm7Q9D173 55 aa10.83□□□□□ -0.68
Rnf40-202ENSMUST00000205694 G6pc2Q9Z186 355 aa10.83□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Igkv4-71A0A0G2JEH0 117 aa10.82□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Tmem238A9JSM3 176 aa10.82□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Ang6Q5GAN0 147 aa10.82□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Hist3h2bbQ8CGP0 126 aa10.82□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Hist3h2baQ9D2U9 126 aa10.82□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Trbv13-3A0A0B4J1H2 113 aa10.82□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Gm45785A0A1B0GT05 94 aa10.82□□□□□ -0.68
Rnf40-202ENSMUST00000205694 4931422A03RikA2BHN9 113 aa10.82□□□□□ -0.68
Rnf40-202ENSMUST00000205694 P01802 115 aa10.82□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Saa4P31532 130 aa10.82□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Ifi27l2aQ8R412 90 aa10.82□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Clec5aQ9R007 190 aa10.82□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Pcsk5Q04592 1877 aa10.82□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Pax1P09084 446 aa10.82□□□□□ -0.68
Rnf40-202ENSMUST00000205694 LbhQ9CX60 105 aa10.82□□□□□ -0.68
Rnf40-202ENSMUST00000205694 H2-DMb1P35737 261 aa10.82□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Lrrk1Q3UHC2 2014 aa10.82□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Ighv1-49A0A0A6YWX2 117 aa10.81□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Gm28038F7BCN9 126 aa10.81□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Igkv4-90A0A075B5L3 117 aa10.81□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Trbv12-2A0A0B4J1H1 124 aa10.81□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Gm94Q3V2D2 93 aa10.81□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Sfta2E9PXB6 77 aa10.81□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Gm5819E9PZ96 154 aa10.81□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Gkn1Q9CR36 201 aa10.81□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Pip4p2Q9CZX7 257 aa10.81□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Ighv1-18A0A0A6YXN4 117 aa10.8□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Defa2P28309 93 aa10.8□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Gm26938S4R185 226 aa10.8□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Nat8b-psE0CYC6 232 aa10.8□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Cks1bP61025 79 aa10.8□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Dmrt3Q80WT2 476 aa10.8□□□□□ -0.68
Rnf40-202ENSMUST00000205694 CklfQ9DAS1 152 aa10.8□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Dock9Q8BIK4 2055 aa10.8□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Trbv30A0A0B4J1P1 111 aa10.8□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Defa-rs2P17534 91 aa10.8□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Zfp248Q640N4 576 aa10.8□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Ttc9cQ810A3 171 aa10.8□□□□□ -0.68
Rnf40-202ENSMUST00000205694 A730015C16RikQ8C992 119 aa10.8□□□□□ -0.68
Rnf40-202ENSMUST00000205694 ArtnQ9Z0L2 224 aa10.8□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Frem1Q684R7 2191 aa10.8□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Ntf4Q80VU4 209 aa10.79□□□□□ -0.68
Rnf40-202ENSMUST00000205694 H1fxQ80ZM5 188 aa10.79□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Olfr211Q8VGH2 309 aa10.79□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Pex7P97865 318 aa10.79□□□□□ -0.68
Rnf40-202ENSMUST00000205694 OtorQ9JIE3 128 aa10.79□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Ighv5-6A0A075B5Q0 117 aa10.79□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Tcrg-C1A0A075B5Z0 172 aa10.79□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Znf431E9QAG8 526 aa10.79□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Tcrg-C3L7N479 172 aa10.79□□□□□ -0.68
Rnf40-202ENSMUST00000205694 P01741 114 aa10.79□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Olfr1373Q7TQT6 311 aa10.79□□□□□ -0.68
Rnf40-202ENSMUST00000205694 1700001C19RikQ8K168 210 aa10.79□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Plekhb2Q9QZC7 221 aa10.79□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Tm2d3Q8BJ83 261 aa10.79□□□□□ -0.68
Rnf40-202ENSMUST00000205694 SprnQ8BWU1 147 aa10.79□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Lamtor2Q9JHS3 125 aa10.79□□□□□ -0.68
Rnf40-202ENSMUST00000205694 Igkv14-111A0A140T8P9 117 aa10.78□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 7.4 ms