RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Olfr322Q5NCC8 327 aa12.65□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 TrioQ0KL02 3102 aa12.65□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Cacng7P62956 275 aa12.65□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Tcf20Q9EPQ8 1987 aa12.65□□□□□ -0.38
Ccdc88b-201ENSMUST00000113440 Olfr235E9Q9Z6 312 aa12.64□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Q3UNZ8 350 aa12.64□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Ighv5-9A0A075B5Q2 117 aa12.64□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Gsx1P31315 261 aa12.64□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Cox6a1P43024 111 aa12.64□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Vmn1r197Q8R265 298 aa12.64□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Trav4-4-dv10A0A075B651 110 aa12.64□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Ighv8-2A0A0A6YW58 119 aa12.64□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Lgals6O54891 301 aa12.64□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Pfn1P62962 140 aa12.64□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Rnase6Q9D244 153 aa12.64□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Igkv4-80A0A075B5L7 116 aa12.64□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Olfr433Q7TRV9 314 aa12.64□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 MavsQ8VCF0 503 aa12.64□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Tcrg-V6A0A075B5Y8 134 aa12.63□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Trbv17A0A140T8P8 114 aa12.63□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Umad1E0CX23 159 aa12.63□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Gm17334Q8C6U3 126 aa12.63□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Olfr984Q8VFN1 314 aa12.63□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Tmem89Q9DA04 169 aa12.63□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 A0A1Y7VMQ4 148 aa12.63□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Lhfpl1Q80SV1 220 aa12.63□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Olfr498Q8VEW2 330 aa12.63□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Inafm1E9PV59 130 aa12.63□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Loxl2P58022 776 aa12.62□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Olfr1209Q3SXJ3 310 aa12.62□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Q9D8L0 127 aa12.62□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Arfgef3Q3UGY8 2170 aa12.62□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Tmem136Q3TYE7 245 aa12.62□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Hapln4Q80WM4 400 aa12.62□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Fhl4Q8CDC8 279 aa12.62□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Tm4sf20Q9CQY8 226 aa12.62□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Iah1Q9DB29 249 aa12.62□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Phlda3Q9WV95 125 aa12.62□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Amn1B8JKV0 258 aa12.62□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Mogat1Q91ZV4 335 aa12.62□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Cend1Q9JKC6 149 aa12.62□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Ighv1-31A0A0A6YWK5 117 aa12.62□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Ighv1-20A0A0A6YX66 117 aa12.62□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Rnf5O35445 180 aa12.62□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Svs5P30933 122 aa12.62□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Tmem88bQ3TYP4 173 aa12.62□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Gm10447Q3UQ92 135 aa12.62□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 4930544G11RikQ9CR99 193 aa12.62□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Vmn1r1E9PVR6 306 aa12.61□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 P01649 108 aa12.61□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Id3P41133 119 aa12.61□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Vmn1r70Q8R254 298 aa12.61□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Abca1P41233 2261 aa12.61□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Piezo2Q8CD54 2822 aa12.61□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 P01658 132 aa12.61□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Nat6Q9R123 314 aa12.61□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Nckap5E9QAE1 1909 aa12.61□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Igkv4-91A0A075B5L2 119 aa12.61□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Gm20708H3BKF4 155 aa12.61□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Olfr1402Q8VET1 320 aa12.61□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Gpx7Q99LJ6 186 aa12.61□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Olfr1337A2ACY8 315 aa12.6□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Zg16Q8K0C5 167 aa12.6□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Pear1Q8VIK5 1034 aa12.6□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Fancd2osQ9D4K4 178 aa12.6□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Gm17732E9Q5I2 61 aa12.6□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Tmem91Q8C581 172 aa12.6□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Vmn1r216Q8R257 298 aa12.6□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Abca4O35600 2310 aa12.6□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Trbv31A0A075B5J5 111 aa12.6□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Thap8E9Q695 213 aa12.6□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Lrcol1Q3URS3 161 aa12.6□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Gm12888Q3UW77 119 aa12.6□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Gnb1lQ9EQ15 326 aa12.6□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Crim1Q9JLL0 1037 aa12.6□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Lama3Q61789 3330 aa12.6□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Smlr1J3QMJ4 66 aa12.6□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 RhogP84096 191 aa12.6□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Mapk1ip1Q9D7G9 263 aa12.59□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Trav7-5A0A0G2JFX6 112 aa12.59□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Ly6lH3BJG9 140 aa12.59□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Saa3P04918 122 aa12.59□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Gm6034E9Q101 117 aa12.59□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Gm19684G3UZ45 117 aa12.59□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Trav3-1Q5R1I8 114 aa12.59□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Spata45Q9CVW4 97 aa12.59□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Crybb3Q9JJU9 211 aa12.59□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Zfp950A0A0U1RQ46 609 aa12.59□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 Ormdl2Q9CQZ0 153 aa12.59□□□□□ -0.39
Ccdc88b-201ENSMUST00000113440 IappP12968 93 aa12.58□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Wfdc9Q3UW41 83 aa12.58□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Mcrip2Q9CQB2 160 aaKnown RBP12.58□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Gtsf1Q9DAN6 167 aa12.58□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 SlpiP97430 131 aa12.58□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 QrfpQ8CE23 124 aa12.58□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Avpi1Q9D7H4 142 aa12.58□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Pex7P97865 318 aa12.58□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 SeleQ00690 612 aa12.58□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 BC106179Q8C9L1 186 aa12.58□□□□□ -0.4
Ccdc88b-201ENSMUST00000113440 Tmem190Q9D2E9 166 aa12.58□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 69.9 ms