RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Mrpl27Q99N92 148 aa10.69□□□□□ -0.7
Clcn3-204ENSMUST00000110301 BptfA2A654 3036 aaKnown RBP10.69□□□□□ -0.7
Clcn3-204ENSMUST00000110301 CampP51437 172 aa10.69□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Hist1h1tQ07133 208 aa10.69□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Cib3Q0P523 160 aa10.69□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Cd300eQ8K249 196 aa10.69□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Tctex1d1Q9D5I4 173 aa10.69□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Hivep3A2A884 2348 aa10.68□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Ighv1-67A0A0G2JFN9 117 aa10.68□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Gm10521E9PZK0 135 aa10.68□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Smim6Q3U0I6 56 aa10.68□□□□□ -0.7
Clcn3-204ENSMUST00000110301 B020031M17RikQ3UT11 173 aa10.68□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Ndufv3Q8BK30 104 aaKnown RBP10.68□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Rpp25lQ99JH1 163 aa10.68□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Urm1Q9D2P4 101 aa10.68□□□□□ -0.7
Clcn3-204ENSMUST00000110301 P01792 123 aa10.68□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Id3P41133 119 aa10.68□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Fam216bQ8CC14 138 aa10.68□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Psg18B2RSG7 476 aa10.68□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Plcxd2B2RXA1 340 aa10.68□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Ripply2Q2WG76 128 aa10.68□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Ighv1-58A0A075B5W9 117 aa10.67□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Trav7-4A0A075B6C1 113 aa10.67□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Zfp493E9Q1L8 384 aa10.67□□□□□ -0.7
Clcn3-204ENSMUST00000110301 AponG3X9D6 251 aa10.67□□□□□ -0.7
Clcn3-204ENSMUST00000110301 P01724 129 aa10.67□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Trav7d-4Q5R1H9 113 aa10.67□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Slamf7Q8BHK6 333 aa10.67□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Iba57Q8CAK1 358 aaKnown RBP10.67□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Tmem170aQ9D342 144 aa10.67□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Ovol1Q9WTJ2 267 aa10.67□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Olfr748E9Q9Z0 307 aa10.67□□□□□ -0.7
Clcn3-204ENSMUST00000110301 SeleQ00690 612 aa10.67□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Znf474Q6V5K9 347 aa10.67□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Gpr132Q9Z282 382 aa10.67□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Scgb1b10A0A087WPW0 93 aa10.67□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Olfr869E9PX82 323 aa10.67□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Gm37988J3QM41 62 aa10.67□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Mc5rP41149 325 aa10.67□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Shisal1Q0VBP7 198 aa10.67□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Defb18Q30KP5 85 aa10.67□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Gm10118Q8C8J5 116 aa10.67□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Fam24aQ8CF27 98 aa10.67□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Ube2tQ9CQ37 204 aa10.67□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Pam16Q9CQV1 125 aa10.67□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Tcrg-C2A0A075B5Z2 167 aa10.66□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Trav4-4-dv10A0A075B651 110 aa10.66□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Ighv1-19A0A0A6YWX0 117 aa10.66□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP10.66□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Amn1B8JKV0 258 aa10.66□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Vmn1r1E9PVR6 306 aa10.66□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Olfr1116E9PXB8 307 aa10.66□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Gm4133K9J7G6 307 aa10.66□□□□□ -0.7
Clcn3-204ENSMUST00000110301 P01853 167 aa10.66□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Olfr365Q8VFT2 312 aa10.66□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Cml3Q9JIY8 226 aa10.66□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Gm6871L7N248 545 aa10.66□□□□□ -0.7
Clcn3-204ENSMUST00000110301 P01801 115 aa10.66□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Atp6v0cP63082 155 aa10.66□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Ang4Q3TMQ6 144 aa10.66□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Gm10803Q3TZS6 135 aa10.66□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Khdc1aQ3UWR2 166 aa10.66□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Vsig8Q6P3A4 417 aa10.66□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Gm9949Q8C9F4 104 aa10.66□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Olfr1191-ps1A0A1L1STD5 311 aa10.66□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Il22ra2Q80XF5 230 aa10.66□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Tmem160Q9D938 188 aa10.66□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Kiaa1549Q68FD9 1940 aa10.65□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Arl14eplQ3UKZ7 152 aa10.65□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Slc35d2Q762D5 326 aa10.65□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Trav16A0A075B653 116 aa10.65□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Irf2bp2E9Q1P8 570 aa10.65□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Tmem129Q8K304 362 aa10.65□□□□□ -0.7
Clcn3-204ENSMUST00000110301 Igkv4-90A0A075B5L3 117 aa10.64□□□□□ -0.71
Clcn3-204ENSMUST00000110301 Ighv1-15A0A0A6YXA5 117 aa10.64□□□□□ -0.71
Clcn3-204ENSMUST00000110301 P03980 138 aa10.64□□□□□ -0.71
Clcn3-204ENSMUST00000110301 AY761185Q5ERI8 94 aa10.64□□□□□ -0.71
Clcn3-204ENSMUST00000110301 Gm10190Q8BSD7 107 aa10.64□□□□□ -0.71
Clcn3-204ENSMUST00000110301 Nat6Q9R123 314 aa10.64□□□□□ -0.71
Clcn3-204ENSMUST00000110301 ColqO35348 457 aa10.64□□□□□ -0.71
Clcn3-204ENSMUST00000110301 Txn2P97493 166 aa10.64□□□□□ -0.71
Clcn3-204ENSMUST00000110301 RprmlQ3URD2 117 aa10.64□□□□□ -0.71
Clcn3-204ENSMUST00000110301 Q4KKZ1 196 aa10.64□□□□□ -0.71
Clcn3-204ENSMUST00000110301 Olfr1262Q8VGN2 304 aa10.64□□□□□ -0.71
Clcn3-204ENSMUST00000110301 Ceacam11Q9D0Z8 303 aa10.64□□□□□ -0.71
Clcn3-204ENSMUST00000110301 GlmpQ9JHJ3 404 aa10.64□□□□□ -0.71
Clcn3-204ENSMUST00000110301 Rbx1P62878 108 aa10.64□□□□□ -0.71
Clcn3-204ENSMUST00000110301 Olfr148Q60887 310 aa10.64□□□□□ -0.71
Clcn3-204ENSMUST00000110301 Uqcc3Q8K2T4 89 aa10.63□□□□□ -0.71
Clcn3-204ENSMUST00000110301 Nbeal1E9PYP2 2688 aa10.63□□□□□ -0.71
Clcn3-204ENSMUST00000110301 Trbv13-3A0A0B4J1H2 113 aa10.63□□□□□ -0.71
Clcn3-204ENSMUST00000110301 Hoxa5P09021 270 aa10.63□□□□□ -0.71
Clcn3-204ENSMUST00000110301 Hectd1Q69ZR2 2618 aaKnown RBP10.63□□□□□ -0.71
Clcn3-204ENSMUST00000110301 Hist1h2bmP10854 126 aa10.63□□□□□ -0.71
Clcn3-204ENSMUST00000110301 Hist1h2bhQ64478 126 aa10.63□□□□□ -0.71
Clcn3-204ENSMUST00000110301 Hist2h2bbQ64525 126 aa10.63□□□□□ -0.71
Clcn3-204ENSMUST00000110301 Hist1h2bcQ6ZWY9 126 aaKnown RBP10.63□□□□□ -0.71
Clcn3-204ENSMUST00000110301 Tnfsf18Q7TS55 173 aa10.63□□□□□ -0.71
Clcn3-204ENSMUST00000110301 Trav6-4A0A075B6B4 115 aa10.63□□□□□ -0.71
Clcn3-204ENSMUST00000110301 Ms4a12A0A087WSB9 263 aa10.63□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 91 ms