RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Vmn1r66Q8K4I0 310 aa6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Pttg1ipQ8R143 174 aa6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Tmem100Q9CQG9 134 aa6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Tmem89Q9DA04 169 aa6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Cyb5r3Q9DCN2 301 aaKnown RBP6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 PtprqP0C5E4 2300 aa6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Gm37240E9QAY5 252 aa6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Gm5108J3QP01 101 aa6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Fhl2O70433 279 aa6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Psmb8P28063 276 aa6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Cd69P37217 199 aa6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 RanP62827 216 aaKnown RBP6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Olfr323Q5NCD0 323 aa6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Eif5a2Q8BGY2 153 aaKnown RBP6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Nrn1Q8CFV4 142 aa6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Olfr262Q8VFV8 312 aa6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Rnf126Q91YL2 313 aa6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Krtap26-1Q9D7N2 215 aa6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 1700008P02RikQ9DAJ8 175 aa6.69□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Ighv1-53A0A075B5W3 117 aa6.68□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Trbv13-3A0A0B4J1H2 113 aa6.68□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Olfr556E9Q549 324 aa6.68□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Sap30O88574 220 aa6.68□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 ParlQ5XJY4 377 aa6.68□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Olfr150Q60895 312 aa6.68□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Stxbp6Q8R3T5 210 aa6.68□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Ndufa5Q9CPP6 116 aa6.68□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Glo1Q9CPU0 184 aa6.68□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Vax2Q9WTP9 292 aa6.68□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Olfr1024A2ASU7 327 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Gm3443F7CCV5 94 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Gm9602J3QPD5 205 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Rab19P35294 217 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Gm10447Q3UQ92 135 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 SelplgQ62170 397 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 C730034F03RikQ8BGL5 111 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 1810024B03RikQ8BWE1 200 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Fbxl15Q91W61 300 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Mad2l1bpQ9DCX1 276 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 SelenokQ9JLJ1 94 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Prss1Q9Z1R9 246 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Ighv2-7A0A075B5Q8 116 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Igkv4-69A0A0B4J1I6 116 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Gm12355A2A4X6 163 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Shisal2aA2A9G7 189 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Ccdc71lE9Q4T4 218 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Pde6dO55057 150 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 P01674 108 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Ly6c2P0CW03 131 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Tac3P55099 116 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Sumo1P63166 101 aaKnown RBP6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Srsf3P84104 164 aaKnown RBP6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 GchfrP99025 84 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Krtap4-1Q3UUY3 169 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Q4KKZ1 196 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Tctex1d4Q8CDY7 219 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Olfr480Q8VEZ0 312 aa6.67□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Olfr235E9Q9Z6 312 aa6.66□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Mtco2P00405 227 aaKnown RBP6.66□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 AW146154Q3TPQ7 468 aa6.66□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Odf3l1Q810P2 275 aa6.66□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 AplnrQ9WV08 377 aa6.66□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Gm5878E9PUB3 99 aa6.66□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Gm16519F8VQK7 162 aa6.66□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Meox2P32443 303 aa6.66□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Smim6Q3U0I6 56 aa6.66□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Pafah1b2Q61206 229 aa6.66□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Nup62Q63850 526 aa6.66□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 2810408A11RikQ6NSU2 435 aa6.66□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Olfr1030Q8VFL5 318 aa6.66□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Gatad1Q920S3 266 aa6.66□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Hsbp1Q9CQZ1 76 aa6.66□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Smdt1Q9DB10 107 aa6.66□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Ighv1-12A0A0A6YXJ9 117 aa6.65□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Gm20422E9PUR3 255 aa6.65□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Rpp30O88796 268 aaKnown RBP6.65□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 GzmfP08883 248 aa6.65□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Slc25a5P51881 298 aaKnown RBP6.65□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Fbxl7Q5BJ29 491 aa6.65□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Olfr16Q62007 309 aa6.65□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Zfp248Q640N4 576 aa6.65□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Olfr305Q7TS02 319 aa6.65□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Ell3Q80VR2 395 aa6.65□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Gphb5Q812B2 130 aa6.65□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Slc36a4Q8CH36 500 aa6.65□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Tspan4Q9DCK3 238 aa6.65□□□□□ -1.34
Ccdc28a-201ENSMUST00000052648 Trav6n-5A0A075B621 112 aa6.65□□□□□ -1.35
Ccdc28a-201ENSMUST00000052648 Trav6-5A0A075B6B5 112 aa6.65□□□□□ -1.35
Ccdc28a-201ENSMUST00000052648 Gm36176A0A1W2P8D5 158 aa6.65□□□□□ -1.35
Ccdc28a-201ENSMUST00000052648 H2al1jA2BFR3 109 aa6.65□□□□□ -1.35
Ccdc28a-201ENSMUST00000052648 Gm6096D3YTY6 151 aa6.65□□□□□ -1.35
Ccdc28a-201ENSMUST00000052648 Evi2aP20934 223 aa6.65□□□□□ -1.35
Ccdc28a-201ENSMUST00000052648 Defa11P50709 85 aa6.65□□□□□ -1.35
Ccdc28a-201ENSMUST00000052648 Tnfsf15Q5UBV8 252 aa6.65□□□□□ -1.35
Ccdc28a-201ENSMUST00000052648 Olfr904Q7TRC9 310 aa6.65□□□□□ -1.35
Ccdc28a-201ENSMUST00000052648 6030452D12RikQ8CD33 222 aa6.65□□□□□ -1.35
Ccdc28a-201ENSMUST00000052648 Ythdf2Q91YT7 579 aaKnown RBP6.65□□□□□ -1.35
Ccdc28a-201ENSMUST00000052648 Lyg1Q9D7Q0 197 aa6.65□□□□□ -1.35
Ccdc28a-201ENSMUST00000052648 Sult1b1Q9QWG7 299 aa6.65□□□□□ -1.35
Ccdc28a-201ENSMUST00000052648 Obox8V9GWY9 217 aa6.65□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 45.9 ms