Protein–RNA interactions for Protein: Q8K4I0

Vmn1r66, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r66Q8K4I0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Vmn1r66Q8K4I0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
Vmn1r66Q8K4I0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Vmn1r66Q8K4I0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Vmn1r66Q8K4I0 Gm25239-201ENSMUST00000174915 86 ntBASIC26.38■■□□□ 1.81
Vmn1r66Q8K4I0 Psd-208ENSMUST00000224556 2034 ntBASIC26.22■■□□□ 1.79
Vmn1r66Q8K4I0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Vmn1r66Q8K4I0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Vmn1r66Q8K4I0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Vmn1r66Q8K4I0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Vmn1r66Q8K4I0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Vmn1r66Q8K4I0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Vmn1r66Q8K4I0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Vmn1r66Q8K4I0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Vmn1r66Q8K4I0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Vmn1r66Q8K4I0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Vmn1r66Q8K4I0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Vmn1r66Q8K4I0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Vmn1r66Q8K4I0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Vmn1r66Q8K4I0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Vmn1r66Q8K4I0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Vmn1r66Q8K4I0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Vmn1r66Q8K4I0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Vmn1r66Q8K4I0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.87■■□□□ 1.41
Vmn1r66Q8K4I0 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.87■■□□□ 1.41
Vmn1r66Q8K4I0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Vmn1r66Q8K4I0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Vmn1r66Q8K4I0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Vmn1r66Q8K4I0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
Vmn1r66Q8K4I0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Vmn1r66Q8K4I0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Vmn1r66Q8K4I0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Vmn1r66Q8K4I0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.72■■□□□ 1.39
Vmn1r66Q8K4I0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.67■■□□□ 1.38
Vmn1r66Q8K4I0 Gm15042-201ENSMUST00000120212 883 ntBASIC23.62■■□□□ 1.37
Vmn1r66Q8K4I0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Vmn1r66Q8K4I0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Vmn1r66Q8K4I0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Vmn1r66Q8K4I0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Vmn1r66Q8K4I0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Vmn1r66Q8K4I0 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.33■■□□□ 1.33
Vmn1r66Q8K4I0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Vmn1r66Q8K4I0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Vmn1r66Q8K4I0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
Vmn1r66Q8K4I0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Vmn1r66Q8K4I0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Vmn1r66Q8K4I0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.11■■□□□ 1.29
Vmn1r66Q8K4I0 Gm15045-201ENSMUST00000117359 883 ntBASIC23.09■■□□□ 1.29
Vmn1r66Q8K4I0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23■■□□□ 1.27
Vmn1r66Q8K4I0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Vmn1r66Q8K4I0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Vmn1r66Q8K4I0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Vmn1r66Q8K4I0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.95■■□□□ 1.27
Vmn1r66Q8K4I0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Vmn1r66Q8K4I0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Vmn1r66Q8K4I0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Vmn1r66Q8K4I0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Vmn1r66Q8K4I0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.76■■□□□ 1.23
Vmn1r66Q8K4I0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Vmn1r66Q8K4I0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Vmn1r66Q8K4I0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Vmn1r66Q8K4I0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Vmn1r66Q8K4I0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Vmn1r66Q8K4I0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
Vmn1r66Q8K4I0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Vmn1r66Q8K4I0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Vmn1r66Q8K4I0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Vmn1r66Q8K4I0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Vmn1r66Q8K4I0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
Vmn1r66Q8K4I0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.57■■□□□ 1.2
Vmn1r66Q8K4I0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Vmn1r66Q8K4I0 Gm24109-201ENSMUST00000175489 103 ntBASIC22.55■■□□□ 1.2
Vmn1r66Q8K4I0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Vmn1r66Q8K4I0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Vmn1r66Q8K4I0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Vmn1r66Q8K4I0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Vmn1r66Q8K4I0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Vmn1r66Q8K4I0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Vmn1r66Q8K4I0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Vmn1r66Q8K4I0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Vmn1r66Q8K4I0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Vmn1r66Q8K4I0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Vmn1r66Q8K4I0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Vmn1r66Q8K4I0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.4■■□□□ 1.18
Vmn1r66Q8K4I0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Vmn1r66Q8K4I0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.36■■□□□ 1.17
Vmn1r66Q8K4I0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.35■■□□□ 1.17
Vmn1r66Q8K4I0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Vmn1r66Q8K4I0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Vmn1r66Q8K4I0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Vmn1r66Q8K4I0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Vmn1r66Q8K4I0 Gm23366-201ENSMUST00000175022 89 ntBASIC22.2■■□□□ 1.14
Vmn1r66Q8K4I0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Vmn1r66Q8K4I0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vmn1r66Q8K4I0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Vmn1r66Q8K4I0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Vmn1r66Q8K4I0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Vmn1r66Q8K4I0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Vmn1r66Q8K4I0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Vmn1r66Q8K4I0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 823.8 ms