RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 C9orf62Q8N4C0 152 aa0.42□□□□□ -2.34
CALCOCO2-222ENST00000514006 S100A16Q96FQ6 103 aaKnown RBP0.42□□□□□ -2.34
CALCOCO2-222ENST00000514006 PKD1L1Q8TDX9 2849 aa0.42□□□□□ -2.34
CALCOCO2-222ENST00000514006 PLIN4Q96Q06 1357 aa0.42□□□□□ -2.34
CALCOCO2-222ENST00000514006 CACNA1AO00555 2505 aa0.41□□□□□ -2.34
CALCOCO2-222ENST00000514006 CSPG4Q6UVK1 2322 aa0.41□□□□□ -2.34
CALCOCO2-222ENST00000514006 IGLC2P0DOY2 106 aa0.41□□□□□ -2.34
CALCOCO2-222ENST00000514006 IGLC3P0DOY3 106 aa0.41□□□□□ -2.34
CALCOCO2-222ENST00000514006 FXYD6Q9H0Q3 95 aa0.41□□□□□ -2.34
CALCOCO2-222ENST00000514006 UBE2D4Q9Y2X8 147 aa0.41□□□□□ -2.34
CALCOCO2-222ENST00000514006 PTPN13Q12923 2485 aa0.4□□□□□ -2.35
CALCOCO2-222ENST00000514006 UBR3Q6ZT12 1888 aa0.4□□□□□ -2.35
CALCOCO2-222ENST00000514006 ALKQ9UM73 1620 aa0.4□□□□□ -2.35
CALCOCO2-222ENST00000514006 CYB5AP00167 134 aa0.4□□□□□ -2.35
CALCOCO2-222ENST00000514006 BPTFQ12830 3046 aa0.4□□□□□ -2.35
CALCOCO2-222ENST00000514006 NMSQ5H8A3 153 aa0.39□□□□□ -2.35
CALCOCO2-222ENST00000514006 ATRQ13535 2644 aa0.39□□□□□ -2.35
CALCOCO2-222ENST00000514006 RB1CC1Q8TDY2 1594 aa0.39□□□□□ -2.35
CALCOCO2-222ENST00000514006 SPTA1P02549 2419 aa0.38□□□□□ -2.35
CALCOCO2-222ENST00000514006 I3L3M4 83 aa0.38□□□□□ -2.35
CALCOCO2-222ENST00000514006 MUC5BQ9HC84 5762 aaPredicted RBP0.38□□□□□ -2.35
CALCOCO2-222ENST00000514006 DMBT1Q9UGM3 2413 aaPredicted RBP0.38□□□□□ -2.35
CALCOCO2-222ENST00000514006 UBR4Q5T4S7 5183 aa0.38□□□□□ -2.35
CALCOCO2-222ENST00000514006 MACF1Q9UPN3 7388 aaKnown RBP0.38□□□□□ -2.35
CALCOCO2-222ENST00000514006 STAB1Q9NY15 2570 aa0.38□□□□□ -2.35
CALCOCO2-222ENST00000514006 NEXMIFQ5QGS0 1516 aa0.38□□□□□ -2.35
CALCOCO2-222ENST00000514006 CPSF4LA6NMK7 179 aaKnown RBP0.37□□□□□ -2.35
CALCOCO2-222ENST00000514006 SPINK4O60575 86 aa0.37□□□□□ -2.35
CALCOCO2-222ENST00000514006 DEFB105AQ8NG35 78 aa0.37□□□□□ -2.35
CALCOCO2-222ENST00000514006 PKD1L2Q7Z442 2459 aa0.37□□□□□ -2.35
CALCOCO2-222ENST00000514006 COL6A3P12111 3177 aa0.37□□□□□ -2.35
CALCOCO2-222ENST00000514006 NKTRP30414 1462 aaKnown RBP0.36□□□□□ -2.35
CALCOCO2-222ENST00000514006 AHNAKQ09666 5890 aaKnown RBP0.36□□□□□ -2.35
CALCOCO2-222ENST00000514006 TRANK1O15050 2925 aa0.36□□□□□ -2.35
CALCOCO2-222ENST00000514006 PCLOQ9Y6V0 5065 aa0.36□□□□□ -2.35
CALCOCO2-222ENST00000514006 PLGLAQ15195 96 aa0.36□□□□□ -2.35
CALCOCO2-222ENST00000514006 DEFB112Q30KQ8 113 aa0.36□□□□□ -2.35
CALCOCO2-222ENST00000514006 RABAC1Q9UI14 185 aa0.36□□□□□ -2.35
CALCOCO2-222ENST00000514006 QSER1Q2KHR3 1735 aa0.35□□□□□ -2.35
CALCOCO2-222ENST00000514006 KIF14Q15058 1648 aa0.35□□□□□ -2.35
CALCOCO2-222ENST00000514006 IQCF6A8MYZ5 107 aa0.35□□□□□ -2.35
CALCOCO2-222ENST00000514006 SNRPFP62306 86 aaKnown RBP0.35□□□□□ -2.35
CALCOCO2-222ENST00000514006 SUPT6HQ7KZ85 1726 aaKnown RBP0.35□□□□□ -2.35
CALCOCO2-222ENST00000514006 RGPD2P0DJD1 1756 aa0.34□□□□□ -2.35
CALCOCO2-222ENST00000514006 SPTY2D1-AS1A0A0U1RR47 76 aa0.34□□□□□ -2.36
CALCOCO2-222ENST00000514006 APLNQ9ULZ1 77 aa0.34□□□□□ -2.36
CALCOCO2-222ENST00000514006 MAP3K4Q9Y6R4 1608 aa0.34□□□□□ -2.36
CALCOCO2-222ENST00000514006 BCORQ6W2J9 1755 aa0.33□□□□□ -2.36
CALCOCO2-222ENST00000514006 A0A1B0GUT8 65 aa0.33□□□□□ -2.36
CALCOCO2-222ENST00000514006 KLK9Q2XQG4 91 aa0.33□□□□□ -2.36
CALCOCO2-222ENST00000514006 HUWE1Q7Z6Z7 4374 aaKnown RBP0.33□□□□□ -2.36
CALCOCO2-222ENST00000514006 ANKHD1Q8IWZ3 2542 aaKnown RBP0.33□□□□□ -2.36
CALCOCO2-222ENST00000514006 KIAA1109Q2LD37 5005 aa0.33□□□□□ -2.36
CALCOCO2-222ENST00000514006 COL7A1Q02388 2944 aa0.32□□□□□ -2.36
CALCOCO2-222ENST00000514006 MYMXA0A1B0GTQ4 84 aa0.32□□□□□ -2.36
CALCOCO2-222ENST00000514006 RGPD1P0DJD0 1748 aa0.32□□□□□ -2.36
CALCOCO2-222ENST00000514006 TEP1Q99973 2627 aaKnown RBP0.32□□□□□ -2.36
CALCOCO2-222ENST00000514006 KMT2DO14686 5537 aa0.31□□□□□ -2.36
CALCOCO2-222ENST00000514006 UACAQ9BZF9 1416 aa0.31□□□□□ -2.36
CALCOCO2-222ENST00000514006 SPTBN4Q9H254 2564 aa0.31□□□□□ -2.36
CALCOCO2-222ENST00000514006 SYNE2Q8WXH0 6885 aaKnown RBP0.31□□□□□ -2.36
CALCOCO2-222ENST00000514006 ATP7BP35670 1465 aa0.31□□□□□ -2.36
CALCOCO2-222ENST00000514006 LINC00643Q86TS7 51 aa0.31□□□□□ -2.36
CALCOCO2-222ENST00000514006 DSTQ03001 7570 aaKnown RBP0.31□□□□□ -2.36
CALCOCO2-222ENST00000514006 TMEM131LA2VDJ0 1609 aa0.31□□□□□ -2.36
CALCOCO2-222ENST00000514006 FSIP2Q5CZC0 6907 aa0.3□□□□□ -2.36
CALCOCO2-222ENST00000514006 KMT2CQ8NEZ4 4911 aaKnown RBP0.3□□□□□ -2.36
CALCOCO2-222ENST00000514006 MDN1Q9NU22 5596 aa0.29□□□□□ -2.36
CALCOCO2-222ENST00000514006 NEBP20929 6669 aa0.29□□□□□ -2.36
CALCOCO2-222ENST00000514006 FLNAP21333 2647 aaKnown RBP0.29□□□□□ -2.36
CALCOCO2-222ENST00000514006 MUC2Q02817 5179 aa0.29□□□□□ -2.36
CALCOCO2-222ENST00000514006 TDRG1Q3Y452 100 aa0.29□□□□□ -2.36
CALCOCO2-222ENST00000514006 MRPL34Q9BQ48 92 aaKnown RBP0.29□□□□□ -2.36
CALCOCO2-222ENST00000514006 FAT2Q9NYQ8 4349 aa0.29□□□□□ -2.36
CALCOCO2-222ENST00000514006 NSD1Q96L73 2696 aaPredicted RBP0.28□□□□□ -2.36
CALCOCO2-222ENST00000514006 ACYP1P07311 99 aa0.28□□□□□ -2.36
CALCOCO2-222ENST00000514006 SETD2Q9BYW2 2564 aaPredicted RBP0.28□□□□□ -2.37
CALCOCO2-222ENST00000514006 LRRC7Q96NW7 1537 aa0.28□□□□□ -2.37
CALCOCO2-222ENST00000514006 RYR1P21817 5038 aa0.27□□□□□ -2.37
CALCOCO2-222ENST00000514006 RIF1Q5UIP0 2472 aaKnown RBP0.27□□□□□ -2.37
CALCOCO2-222ENST00000514006 SETXQ7Z333 2677 aaKnown RBP0.27□□□□□ -2.37
CALCOCO2-222ENST00000514006 HIVEP1P15822 2718 aa0.27□□□□□ -2.37
CALCOCO2-222ENST00000514006 MAGI2Q86UL8 1455 aa0.27□□□□□ -2.37
CALCOCO2-222ENST00000514006 CHD8Q9HCK8 2581 aa0.27□□□□□ -2.37
CALCOCO2-222ENST00000514006 LTN1O94822 1766 aa0.27□□□□□ -2.37
CALCOCO2-222ENST00000514006 MYO9AB2RTY4 2548 aa0.26□□□□□ -2.37
CALCOCO2-222ENST00000514006 RNF213Q63HN8 5207 aa0.26□□□□□ -2.37
CALCOCO2-222ENST00000514006 COX7BP24311 80 aa0.26□□□□□ -2.37
CALCOCO2-222ENST00000514006 MED14O60244 1454 aa0.26□□□□□ -2.37
CALCOCO2-222ENST00000514006 MYCBP2O75592 4640 aa0.26□□□□□ -2.37
CALCOCO2-222ENST00000514006 DOPEY1Q5JWR5 2465 aa0.26□□□□□ -2.37
CALCOCO2-222ENST00000514006 COL6A5A8TX70 2615 aa0.26□□□□□ -2.37
CALCOCO2-222ENST00000514006 BSNQ9UPA5 3926 aa0.26□□□□□ -2.37
CALCOCO2-222ENST00000514006 NBEAL2Q6ZNJ1 2754 aa0.25□□□□□ -2.37
CALCOCO2-222ENST00000514006 ITPR3Q14573 2671 aa0.25□□□□□ -2.37
CALCOCO2-222ENST00000514006 HECTD1Q9ULT8 2610 aa0.25□□□□□ -2.37
CALCOCO2-222ENST00000514006 USP9XQ93008 2570 aaPredicted RBP0.25□□□□□ -2.37
CALCOCO2-222ENST00000514006 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.25□□□□□ -2.374e-10■■■■□ 20.9
CALCOCO2-222ENST00000514006 CLIP1P30622 1438 aa0.25□□□□□ -2.37
CALCOCO2-222ENST00000514006 KMT2AQ03164 3969 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms