RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 IGKV2-29A2NJV5 120 aaPredicted RBP2.48□□□□□ -2.01
HMGB3P18-201ENST00000406327 IGHV3-30P01768 117 aa2.48□□□□□ -2.01
HMGB3P18-201ENST00000406327 IGHV3-30-5P0DP03 117 aa2.48□□□□□ -2.01
HMGB3P18-201ENST00000406327 LINC00313P59037 77 aa2.48□□□□□ -2.01
HMGB3P18-201ENST00000406327 UBE2D3P61077 147 aa2.48□□□□□ -2.01
HMGB3P18-201ENST00000406327 UBE2D2P62837 147 aa2.48□□□□□ -2.01
HMGB3P18-201ENST00000406327 RRN3P1Q2M238 152 aa2.48□□□□□ -2.01
HMGB3P18-201ENST00000406327 OCIAD2Q56VL3 154 aa2.48□□□□□ -2.01
HMGB3P18-201ENST00000406327 WFDC10AQ9H1F0 79 aa2.48□□□□□ -2.01
HMGB3P18-201ENST00000406327 NOP10Q9NPE3 64 aaKnown RBP2.48□□□□□ -2.01
HMGB3P18-201ENST00000406327 IGHV3-64A0A075B6Q5 118 aa2.47□□□□□ -2.01
HMGB3P18-201ENST00000406327 TRGV2A0A075B6R0 118 aa2.47□□□□□ -2.01
HMGB3P18-201ENST00000406327 TRBV6-4A0A1B0GX49 114 aa2.47□□□□□ -2.01
HMGB3P18-201ENST00000406327 F8W1H4 67 aa2.47□□□□□ -2.01
HMGB3P18-201ENST00000406327 INSL3P51460 131 aa2.47□□□□□ -2.01
HMGB3P18-201ENST00000406327 Q6ZUT4 128 aa2.47□□□□□ -2.01
HMGB3P18-201ENST00000406327 SBSPONQ8IVN8 264 aa2.47□□□□□ -2.01
HMGB3P18-201ENST00000406327 C10orf126Q8N4M7 172 aa2.47□□□□□ -2.01
HMGB3P18-201ENST00000406327 MUC7Q8TAX7 377 aa2.47□□□□□ -2.01
HMGB3P18-201ENST00000406327 CRYBG3Q68DQ2 2970 aa2.47□□□□□ -2.01
HMGB3P18-201ENST00000406327 CR1P17927 2039 aa2.47□□□□□ -2.01
HMGB3P18-201ENST00000406327 NAV2Q8IVL1 2488 aa2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 MUC4Q99102 2169 aa2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 TRGV4A0A0C4DH28 118 aa2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 SMIM9A6NGZ8 99 aa2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 TMEM238C9JI98 176 aa2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 H3BMG7 143 aa2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 K7ERU9 68 aa2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 TIMM17BO60830 172 aa2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 APOMO95445 188 aa2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 SPINK8P0C7L1 97 aa2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 LINC00694P0DN24 101 aa2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 COX6A2Q02221 97 aa2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 WFDC2Q14508 124 aa2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 C1orf195Q5TG92 126 aa2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 SDIM1Q6ZPB5 146 aa2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 MUSTN1Q8IVN3 82 aa2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 CDC42SE2Q9NRR3 84 aa2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 CDKN2A-AS1Q9UH64 79 aa2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 PRO1854Q9UHT4 67 aa2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 NDUFA12Q9UI09 145 aa2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 MYO18BQ8IUG5 2567 aa2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 PDZD2O15018 2839 aa2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 APCP25054 2843 aa2.46□□□□□ -2.02
HMGB3P18-201ENST00000406327 SVEP1Q4LDE5 3571 aa2.45□□□□□ -2.02
HMGB3P18-201ENST00000406327 POLQO75417 2590 aa2.45□□□□□ -2.02
HMGB3P18-201ENST00000406327 MXRA5Q9NR99 2828 aa2.45□□□□□ -2.02
HMGB3P18-201ENST00000406327 TRBV20-1A0A075B6N2 111 aa2.45□□□□□ -2.02
HMGB3P18-201ENST00000406327 TRAV13-1A0A0B4J241 112 aa2.45□□□□□ -2.02
HMGB3P18-201ENST00000406327 A0A1W2PNN7 141 aa2.45□□□□□ -2.02
HMGB3P18-201ENST00000406327 NDUFA1O15239 70 aa2.45□□□□□ -2.02
HMGB3P18-201ENST00000406327 IGHV3-33P01772 117 aa2.45□□□□□ -2.02
HMGB3P18-201ENST00000406327 IGKV4-1P06312 121 aa2.45□□□□□ -2.02
HMGB3P18-201ENST00000406327 IFITM1P13164 125 aa2.45□□□□□ -2.02
HMGB3P18-201ENST00000406327 KRTAP5-5Q701N2 237 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P18-201ENST00000406327 SCXQ7RTU7 201 aa2.45□□□□□ -2.02
HMGB3P18-201ENST00000406327 SPANXDQ9BXN6 97 aa2.45□□□□□ -2.02
HMGB3P18-201ENST00000406327 SPANXCQ9NY87 97 aa2.45□□□□□ -2.02
HMGB3P18-201ENST00000406327 ERG28Q9UKR5 140 aa2.45□□□□□ -2.02
HMGB3P18-201ENST00000406327 ZFYVE26Q68DK2 2539 aa2.45□□□□□ -2.02
HMGB3P18-201ENST00000406327 ZANQ9Y493 2812 aa2.45□□□□□ -2.02
HMGB3P18-201ENST00000406327 USP9YO00507 2555 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P18-201ENST00000406327 PTPN13Q12923 2485 aa2.44□□□□□ -2.02
HMGB3P18-201ENST00000406327 MAP1AP78559 2803 aaPredicted RBP2.44□□□□□ -2.02
HMGB3P18-201ENST00000406327 CSPG4Q6UVK1 2322 aa2.44□□□□□ -2.02
HMGB3P18-201ENST00000406327 TRBV6-8A0A0A6YYG3 113 aa2.44□□□□□ -2.02
HMGB3P18-201ENST00000406327 LOC107984156A0A0G2JMH3 177 aa2.44□□□□□ -2.02
HMGB3P18-201ENST00000406327 A0A1B0GW54 56 aa2.44□□□□□ -2.02
HMGB3P18-201ENST00000406327 UBE2L6O14933 153 aa2.44□□□□□ -2.02
HMGB3P18-201ENST00000406327 DEFB130BP0DP73 79 aa2.44□□□□□ -2.02
HMGB3P18-201ENST00000406327 DEFB130AP0DP74 79 aa2.44□□□□□ -2.02
HMGB3P18-201ENST00000406327 CIRBPQ14011 172 aaKnown RBP2.44□□□□□ -2.02
HMGB3P18-201ENST00000406327 MIAQ16674 131 aa2.44□□□□□ -2.02
HMGB3P18-201ENST00000406327 LYRM7Q5U5X0 104 aa2.44□□□□□ -2.02
HMGB3P18-201ENST00000406327 ARL17AQ8IVW1 177 aa2.44□□□□□ -2.02
HMGB3P18-201ENST00000406327 WFDC9Q8NEX5 89 aa2.44□□□□□ -2.02
HMGB3P18-201ENST00000406327 VPS25Q9BRG1 176 aa2.44□□□□□ -2.02
HMGB3P18-201ENST00000406327 UPK3BQ9BT76 320 aa2.44□□□□□ -2.02
HMGB3P18-201ENST00000406327 CSMD2Q7Z408 3487 aa2.44□□□□□ -2.02
HMGB3P18-201ENST00000406327 FAM208BQ5VWN6 2430 aa2.44□□□□□ -2.02
HMGB3P18-201ENST00000406327 TEX15Q9BXT5 2789 aa2.44□□□□□ -2.02
HMGB3P18-201ENST00000406327 LRRK2Q5S007 2527 aa2.43□□□□□ -2.02
HMGB3P18-201ENST00000406327 TENM4Q6N022 2769 aa2.43□□□□□ -2.02
HMGB3P18-201ENST00000406327 TRBV30A0A0K0K1B3 111 aa2.43□□□□□ -2.02
HMGB3P18-201ENST00000406327 J3QR89 54 aa2.43□□□□□ -2.02
HMGB3P18-201ENST00000406327 TCL1BO95988 128 aa2.43□□□□□ -2.02
HMGB3P18-201ENST00000406327 ETDBQ3ZM63 59 aa2.43□□□□□ -2.02
HMGB3P18-201ENST00000406327 SFTA2Q6UW10 78 aa2.43□□□□□ -2.02
HMGB3P18-201ENST00000406327 ATP6V0E2Q8NHE4 81 aa2.43□□□□□ -2.02
HMGB3P18-201ENST00000406327 ZNF625Q96I27 306 aaPredicted RBP2.43□□□□□ -2.02
HMGB3P18-201ENST00000406327 PRO0255Q9UI72 69 aa2.43□□□□□ -2.02
HMGB3P18-201ENST00000406327 CENPEQ02224 2701 aa2.43□□□□□ -2.02
HMGB3P18-201ENST00000406327 EPG5Q9HCE0 2579 aa2.42□□□□□ -2.02
HMGB3P18-201ENST00000406327 LINC00959A0A1B0GUT2 108 aa2.42□□□□□ -2.02
HMGB3P18-201ENST00000406327 H7C2G1 150 aa2.42□□□□□ -2.02
HMGB3P18-201ENST00000406327 P0C880 135 aa2.42□□□□□ -2.02
HMGB3P18-201ENST00000406327 LINC00308Q8TCZ7 52 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms