RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Ighv1-36A0A0A6YXT2 117 aa11.31□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Amn1B8JKV0 258 aa11.31□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Trpt1Q8K3A2 249 aa11.31□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Ighv7-2A0A0A6YX91 119 aa11.31□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 3110021N24RikJ3QMN2 152 aa11.31□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Spata46Q4FZF2 204 aa11.31□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Tusc5Q8C838 173 aa11.31□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Trav16nA0A075B634 117 aa11.31□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 HrkP62816 92 aa11.31□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Ccpg1osV9GXK1 122 aa11.31□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Dock7Q8R1A4 2130 aaKnown RBP11.31□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Trav3-1Q5R1I8 114 aa11.31□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Olfr433Q7TRV9 314 aa11.31□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 BC053393A0A0B4J1F6 192 aa11.3□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Tmem30bQ8BHG3 353 aa11.3□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Gm4894Q8CA09 118 aa11.3□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Tpsg1Q9QUL7 311 aa11.3□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Supt4h1bQ9Z199 117 aa11.3□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Il3raP26952 396 aa11.3□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Shisal1Q0VBP7 198 aa11.3□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Gm10384Q3UQ87 92 aa11.3□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Spaca3Q9D9X8 221 aa11.3□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Slamf6Q9ET39 351 aa11.3□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Ighv1-31A0A0A6YWK5 117 aa11.3□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 CirbpP60824 172 aaKnown RBP11.3□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Samd10Q7TST3 202 aa11.3□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Znf787Q8BIF9 381 aa11.3□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Oosp2Q4FZG8 168 aa11.3□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Lhfpl1Q80SV1 220 aa11.3□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Ifitm10Q8BR26 201 aa11.3□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Olfr975Q8VG91 310 aa11.3□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Mapk1ip1Q9D7G9 263 aa11.3□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Rp1l1Q8CGM2 1859 aa11.29□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Gvin1Q80SU7 2427 aa11.29□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Crybg1A0A0G2JG52 2065 aa11.29□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Gm21983D6RFS9 131 aa11.29□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Cox8bP48772 70 aa11.29□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Fancd2osQ9D4K4 178 aa11.29□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Plpp2Q9DAX2 276 aa11.29□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Gpr35Q9ES90 307 aa11.29□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 St6galnac6Q9JM95 333 aa11.29□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Sdk2Q6V4S5 2176 aa11.29□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Umad1E0CX23 159 aa11.29□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Csn3P06796 181 aa11.29□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Tnfrsf9P20334 256 aa11.29□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 AdipoqQ60994 247 aa11.29□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 B1ARW8 110 aa11.29□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Fam110aQ8R184 296 aa11.29□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Prelid3aQ8VE85 172 aa11.29□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Tmem50aQ9CXL1 157 aa11.29□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Fam208bQ5DTT3 2382 aa11.29□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Trav13n-4A0A0G2JG01 110 aa11.28□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Lgals6O54891 301 aa11.28□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Ighv7-4A0A0A6YXL5 121 aa11.28□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Gm4744D3Z3S5 154 aa11.28□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Rnase2O35291 155 aa11.28□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Tac3P55099 116 aa11.28□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Olfr1336Q8VGH5 314 aa11.28□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 G6pc2Q9Z186 355 aa11.28□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 A0A1Y7VMQ4 148 aa11.28□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Ca5aP23589 299 aa11.28□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Vdac2Q60930 295 aaKnown RBP11.28□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Gm27027S4R1M6 97 aa11.28□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Edn3P48299 214 aa11.28□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Q3UNZ8 350 aa11.28□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Gm12253Q5NC48 229 aa11.28□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Fam19a2Q7TPG7 131 aa11.28□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Ttc9cQ810A3 171 aa11.28□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Mcrip2Q9CQB2 160 aaKnown RBP11.28□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Esp24A8R0V6 68 aa11.27□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Gm17677B3GLJ5 116 aa11.27□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 Zg16Q8K0C5 167 aa11.27□□□□□ -0.6
Pcdha1-202ENSMUST00000193839 BC035044E0CXF8 138 aa11.27□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 Olfr235E9Q9Z6 312 aa11.27□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 Dkk1O54908 272 aa11.27□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 Tmem136Q3TYE7 245 aa11.27□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 Olfr1380Q7TQT5 311 aa11.27□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 Tex48Q9DA81 110 aa11.27□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 Ighv1-18A0A0A6YXN4 117 aa11.27□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 Gata2O09100 480 aa11.27□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 P18528 98 aa11.27□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 Wnt2P21552 360 aa11.27□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 Snrpd3P62320 126 aaKnown RBP11.27□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 Wipf2Q6PEV3 440 aa11.27□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 OtosQ8R448 89 aa11.27□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 Olfr1402Q8VET1 320 aa11.27□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 Olfr1195Q8VG21 308 aa11.27□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 Atp5lQ9CPQ8 103 aa11.27□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 Ms4a12A0A087WSB9 263 aa11.26□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 P04219 140 aa11.26□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 Stpg1Q9D2F5 341 aa11.26□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 Abca4O35600 2310 aa11.26□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 Tcf20Q9EPQ8 1987 aa11.26□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 9930022D16RikQ8BG27 128 aa11.26□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 Plekhb2Q9QZC7 221 aa11.26□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 Tcrg-V6A0A075B5Y8 134 aa11.26□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 Gm10447Q3UQ92 135 aa11.26□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 Dnal4Q9DCM4 105 aa11.26□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 SlpiP97430 131 aa11.26□□□□□ -0.61
Pcdha1-202ENSMUST00000193839 Rnase2aQ8K196 155 aa11.26□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 105.6 ms