RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Zfp983E9PUT0 460 aa8.63□□□□□ -1.03
Scn8a-201ENSMUST00000082209 MlanaQ2TA50 113 aa8.63□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Pmaip1Q9JM54 103 aa8.63□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Ighv5-12-4A0A0A6YWG4 117 aa8.63□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Repin1Q5U4E2 545 aa8.63□□□□□ -1.03
Scn8a-201ENSMUST00000082209 SprnQ8BWU1 147 aa8.63□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Rnase2aQ8K196 155 aa8.63□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Hbb-bsA8DUK4 147 aa8.63□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Gm20878L7N244 103 aa8.63□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Hbb-b1P02088 147 aa8.63□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Olfr33Q8VGX7 318 aa8.63□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Ifi27l2aQ8R412 90 aa8.63□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Spint3Q3UW09 88 aa8.63□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Ighv1-7A0A075B5T7 117 aa8.63□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Csrp1P97315 193 aaKnown RBP8.63□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Gtsf1lQ9CWD0 151 aa8.63□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Gm10521E9PZK0 135 aa8.62□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Otx1P80205 355 aa8.62□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Higd1aQ9JLR9 95 aa8.62□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Trav13n-4A0A0G2JG01 110 aa8.62□□□□□ -1.03
Scn8a-201ENSMUST00000082209 MalO09198 153 aa8.62□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Reg1P43137 165 aa8.62□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Loxl2P58022 776 aa8.62□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Olfr1373Q7TQT6 311 aa8.62□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Ighv1-16A0A075B5U1 98 aa8.62□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Gm45871A0A1B0GRI9 540 aa8.62□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Gm28038F7BCN9 126 aa8.62□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Klf14Q19A41 325 aa8.62□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Nit2Q9JHW2 276 aa8.62□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Gm13030A2APQ6 143 aa8.62□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Ly6lH3BJG9 140 aa8.62□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Zfp72Q0VFY0 435 aa8.62□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Pradc1Q9D9N8 188 aa8.62□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Tex48Q9DA81 110 aa8.62□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Ighv1-26A0A075B5V0 117 aa8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Gm12355A2A4X6 163 aa8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Srsf3P84104 164 aaKnown RBP8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Gm36368A0A1D5RLK8 91 aa8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Gng7Q61016 68 aa8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Wfdc21Q8BTE6 63 aa8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Tspan13Q9D8C2 204 aa8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 V1ra8Q9EQ48 279 aa8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 P01660 111 aa8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Gm29289A0A087WPY7 166 aa8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Bcl6bO88282 474 aa8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 P18526 117 aa8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Spink2Q8BMY7 86 aa8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Obox1Q9D350 204 aa8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Pate2Q3UW31 111 aa8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Mex3bQ69Z36 601 aaKnown RBP8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Ssbp1Q9CYR0 152 aaKnown RBP8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 RhohQ9D3G9 191 aa8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Ighv7-3A0A075B5R2 120 aa8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Il2raP01590 268 aa8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 P18532 116 aa8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Jsrp1Q3MI48 332 aa8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Ube2v1Q9CZY3 147 aa8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 PerpQ9JK95 193 aa8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Igkv9-123A0A140T8N8 117 aa8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Wbp1P97764 304 aa8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 ApohQ01339 345 aa8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Abca4O35600 2310 aa8.61□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Iglv3A0A0B4J1K5 122 aa8.6□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Igkv13-85A0A075B666 115 aa8.6□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Pax1P09084 446 aa8.6□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Wnt2P21552 360 aa8.6□□□□□ -1.03
Scn8a-201ENSMUST00000082209 AgerQ62151 402 aa8.6□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Timm10bQ9WV96 100 aa8.6□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Igkv14-126A0A075B5K0 117 aa8.6□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Trbv13-3A0A0B4J1H2 113 aa8.6□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Foxf2O54743 446 aa8.6□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Trbv3A0A0A6YYE2 117 aa8.6□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Prpf8Q99PV0 2335 aaKnown RBP8.6□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Tnfrsf9P20334 256 aa8.6□□□□□ -1.03
Scn8a-201ENSMUST00000082209 March3Q8BRX9 218 aa8.6□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Ighv1-34A0A075B5V2 117 aa8.6□□□□□ -1.03
Scn8a-201ENSMUST00000082209 P01724 129 aa8.6□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Itgb1bp1O35671 200 aa8.6□□□□□ -1.03
Scn8a-201ENSMUST00000082209 5730522E02RikQ5SP45 163 aa8.6□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Cxcl13O55038 109 aa8.6□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Cdkn2aQ64364 169 aa8.6□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Snx22Q8C084 192 aa8.6□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Olfr748E9Q9Z0 307 aa8.6□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Colca2F8VPY8 239 aa8.6□□□□□ -1.03
Scn8a-201ENSMUST00000082209 P01812 117 aa8.6□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Ang6Q5GAN0 147 aa8.6□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Fbxl7Q5BJ29 491 aa8.59□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Igkv6-23A0A140T8N5 115 aa8.59□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Cd69P37217 199 aa8.59□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Dpm2Q9Z324 84 aa8.59□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Samd5Q3V1H9 173 aa8.59□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Col5a3Q9JLI2 1739 aa8.59□□□□□ -1.03
Scn8a-201ENSMUST00000082209 P01736 120 aa8.59□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Ighv1-18A0A0A6YXN4 117 aa8.59□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Il3raP26952 396 aa8.59□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Olfr477Q8VGI6 310 aa8.59□□□□□ -1.03
Scn8a-201ENSMUST00000082209 4930442H23RikQ9D5G7 103 aa8.59□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Saa4P31532 130 aa8.59□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Ndufc2Q9CQ54 120 aa8.59□□□□□ -1.03
Scn8a-201ENSMUST00000082209 Ube2cQ9D1C1 179 aa8.59□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 54.7 ms