RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Gm10521E9PZK0 135 aa7.05□□□□□ -1.28
Clcn3-202ENSMUST00000056508 LeprotO89013 131 aa7.05□□□□□ -1.28
Clcn3-202ENSMUST00000056508 DapQ91XC8 102 aa7.05□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Gm15737D3YZR0 106 aa7.05□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Polr2iP60898 125 aa7.05□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Lmo2P25801 158 aa7.04□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Card19Q9D1I2 183 aa7.04□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Chd5A2A8L1 1946 aa7.04□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Psmg4P0C7N9 123 aa7.04□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Tdgf1P51865 171 aa7.04□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Trav7-6A0A075B640 112 aa7.04□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Lsm2O35900 95 aaKnown RBP7.04□□□□□ -1.28
Clcn3-202ENSMUST00000056508 P01635 115 aa7.04□□□□□ -1.28
Clcn3-202ENSMUST00000056508 DynapQ9D7M5 161 aa7.04□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Zcchc11B2RX14 1644 aaKnown RBP7.04□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Ighv1-80A0A075B5Y3 117 aa7.04□□□□□ -1.28
Clcn3-202ENSMUST00000056508 MgpP19788 104 aa7.04□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Pip4p1Q3TWL2 284 aa7.04□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Zfyve16Q80U44 1528 aa7.04□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Prop1P97458 223 aa7.03□□□□□ -1.28
Clcn3-202ENSMUST00000056508 MiaQ61865 130 aa7.03□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Serp2Q6TAW2 65 aa7.03□□□□□ -1.28
Clcn3-202ENSMUST00000056508 D630044L22RikQ8C701 164 aa7.03□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Spata3Q9D9T6 193 aa7.03□□□□□ -1.28
Clcn3-202ENSMUST00000056508 NesQ6P5H2 1864 aaKnown RBP7.03□□□□□ -1.28
Clcn3-202ENSMUST00000056508 BikO70337 150 aa7.03□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Foxi2Q3I5G5 311 aa7.03□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Muc15Q8C6Z1 331 aa7.03□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Trav9-1A0A075B601 112 aa7.03□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Trav6-4A0A075B6B4 115 aa7.03□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Prss29Q99MS4 279 aa7.03□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Il18bpQ9Z0M9 193 aa7.03□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Q99M08 65 aa7.03□□□□□ -1.28
Clcn3-202ENSMUST00000056508 Ighv1-49A0A0A6YWX2 117 aa7.02□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Gm14418A2ARR6 358 aa7.02□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Gm14322A2AW66 358 aa7.02□□□□□ -1.29
Clcn3-202ENSMUST00000056508 P01820 115 aa7.02□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Rbmy1bQ60990 380 aa7.02□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Trav19A0A0B4J1K4 119 aa7.02□□□□□ -1.29
Clcn3-202ENSMUST00000056508 P01738 130 aa7.02□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Serf2P84102 59 aa7.02□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Fam19a1Q7TPG8 133 aa7.02□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Kiaa0556Q8C753 1610 aa7.02□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Ighv7-3A0A075B5R2 120 aa7.02□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Gm28285A0A087WQ54 102 aa7.02□□□□□ -1.29
Clcn3-202ENSMUST00000056508 P01648 108 aa7.02□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Zfand6Q9DCH6 223 aa7.02□□□□□ -1.29
Clcn3-202ENSMUST00000056508 CtszQ9WUU7 306 aa7.02□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Akap12Q9WTQ5 1684 aa7.02□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Gm14409A2ARR8 349 aa7.02□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Leprotl1Q9CQ74 131 aa7.02□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Igfbp7Q61581 281 aa7.01□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Ndufc1Q9CQY9 76 aa7.01□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Ube2dnl1A2AFH1 155 aa7.01□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Rasl10aQ8K5A4 203 aa7.01□□□□□ -1.29
Clcn3-202ENSMUST00000056508 MaddQ80U28 1577 aa7.01□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Socs3O35718 225 aa7.01□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Cxcl13O55038 109 aa7.01□□□□□ -1.29
Clcn3-202ENSMUST00000056508 P06323 132 aa7.01□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Reg1P43137 165 aa7.01□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Wbp1P97764 304 aa7.01□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Lyzl4Q9D925 145 aa7.01□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Rreb1Q3UH06 1700 aaKnown RBP7.01□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Ighv1-9A0A0A6YW37 117 aa7.01□□□□□ -1.29
Clcn3-202ENSMUST00000056508 A0A1L1STL9 112 aa7.01□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Gm15217A2CG07 155 aa7.01□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Trav6d-4Q5R1I0 115 aa7.01□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Slc25a48Q8BW66 306 aa7.01□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Tm2d1Q99MB3 208 aa7.01□□□□□ -1.29
Clcn3-202ENSMUST00000056508 R3hdmlA2A5I3 253 aa7.01□□□□□ -1.29
Clcn3-202ENSMUST00000056508 BC048562Q80ZQ7 204 aa7.01□□□□□ -1.29
Clcn3-202ENSMUST00000056508 CklfQ9DAS1 152 aa7.01□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Iqgap1Q9JKF1 1657 aaKnown RBP7□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Ighv5-12-4A0A0A6YWG4 117 aa7□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Iglc1A0A0G2JE99 106 aa7□□□□□ -1.29
Clcn3-202ENSMUST00000056508 P0C913 63 aa7□□□□□ -1.29
Clcn3-202ENSMUST00000056508 NnatQ61979 81 aa7□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Prr9Q8BV84 116 aa7□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Rpp25lQ99JH1 163 aa7□□□□□ -1.29
Clcn3-202ENSMUST00000056508 P01678 107 aa7□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Adgrb3Q80ZF8 1522 aa7□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Fer1l4A3KGK3 1992 aa7□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Gm19345G3UYD9 124 aa7□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Gm5108J3QP01 101 aa7□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Atox1O08997 68 aaKnown RBP6.99□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Tmem207P86045 143 aa6.99□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Apoc4Q61268 124 aa6.99□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Igfbpl1Q80W15 270 aa6.99□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Usp32F8VPZ3 1604 aa6.99□□□□□ -1.29
Clcn3-202ENSMUST00000056508 BC049352E9Q2Z6 85 aa6.99□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Q5BN45 167 aa6.99□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Ovol2Q8CIV7 274 aa6.99□□□□□ -1.29
Clcn3-202ENSMUST00000056508 9230112D13RikQ9D260 137 aa6.99□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Znf414Q9DCK4 299 aa6.99□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Fgf23Q9EPC2 251 aa6.99□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Slit2Q9R1B9 1521 aa6.99□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Adgrb1Q3UHD1 1582 aa6.99□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Trav9n-4A0A075B631 113 aa6.99□□□□□ -1.29
Clcn3-202ENSMUST00000056508 Trav12d-3A0A075B6A4 115 aa6.99□□□□□ -1.29
Clcn3-202ENSMUST00000056508 6430628N08RikA0A0U1RQ45 177 aa6.99□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 72.6 ms