RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 IGHV3-49A0A0A0MS15 119 aa2.76□□□□□ -1.97
PRPF38B-205ENST00000485810 IGHV3-66A0A0C4DH42 116 aa2.76□□□□□ -1.97
PRPF38B-205ENST00000485810 C11orf86A6NJI1 115 aa2.76□□□□□ -1.97
PRPF38B-205ENST00000485810 A8MTW9 85 aa2.76□□□□□ -1.97
PRPF38B-205ENST00000485810 ACYP1P07311 99 aa2.76□□□□□ -1.97
PRPF38B-205ENST00000485810 PRB4P10163 310 aaPredicted RBP2.76□□□□□ -1.97
PRPF38B-205ENST00000485810 UBE2D3P61077 147 aa2.76□□□□□ -1.97
PRPF38B-205ENST00000485810 UBE2D2P62837 147 aa2.76□□□□□ -1.97
PRPF38B-205ENST00000485810 RHOHQ15669 191 aa2.76□□□□□ -1.97
PRPF38B-205ENST00000485810 LUZP6Q538Z0 58 aa2.76□□□□□ -1.97
PRPF38B-205ENST00000485810 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
PRPF38B-205ENST00000485810 LINC00467Q9BRT7 94 aa2.76□□□□□ -1.97
PRPF38B-205ENST00000485810 RHPN1-AS1Q9BWJ2 59 aa2.76□□□□□ -1.97
PRPF38B-205ENST00000485810 TTTY13Q9BZ97 58 aa2.76□□□□□ -1.97
PRPF38B-205ENST00000485810 MGAQ8IWI9 3026 aa2.76□□□□□ -1.97
PRPF38B-205ENST00000485810 MED13LQ71F56 2210 aa2.76□□□□□ -1.97
PRPF38B-205ENST00000485810 AKAP13Q12802 2813 aa2.76□□□□□ -1.97
PRPF38B-205ENST00000485810 HIVEP3Q5T1R4 2406 aa2.76□□□□□ -1.97
PRPF38B-205ENST00000485810 A0A0J9YX75 114 aa2.75□□□□□ -1.97
PRPF38B-205ENST00000485810 A0A0J9YY99 117 aa2.75□□□□□ -1.97
PRPF38B-205ENST00000485810 CCKP06307 115 aa2.75□□□□□ -1.97
PRPF38B-205ENST00000485810 IGHV3-30-3P0DP02 117 aa2.75□□□□□ -1.97
PRPF38B-205ENST00000485810 RBM3P98179 157 aaKnown RBP2.75□□□□□ -1.97
PRPF38B-205ENST00000485810 ZFP2Q6ZN57 461 aa2.75□□□□□ -1.97
PRPF38B-205ENST00000485810 Q6ZQT7 251 aa2.75□□□□□ -1.97
PRPF38B-205ENST00000485810 C14orf178Q8N769 122 aaPredicted RBP2.75□□□□□ -1.97
PRPF38B-205ENST00000485810 RPL39LQ96EH5 51 aaKnown RBP2.75□□□□□ -1.97
PRPF38B-205ENST00000485810 AMELXQ99217 191 aa2.75□□□□□ -1.97
PRPF38B-205ENST00000485810 CHCHD7Q9BUK0 85 aa2.75□□□□□ -1.97
PRPF38B-205ENST00000485810 C8orf17Q9NRJ1 99 aa2.75□□□□□ -1.97
PRPF38B-205ENST00000485810 LAMA5O15230 3695 aa2.75□□□□□ -1.97
PRPF38B-205ENST00000485810 NBASA2RRP1 2371 aa2.75□□□□□ -1.97
PRPF38B-205ENST00000485810 SPTBN1Q01082 2364 aaKnown RBP2.75□□□□□ -1.97
PRPF38B-205ENST00000485810 ASPMQ8IZT6 3477 aa2.75□□□□□ -1.97
PRPF38B-205ENST00000485810 AGRNO00468 2067 aa2.75□□□□□ -1.97
PRPF38B-205ENST00000485810 SDHAF1A6NFY7 115 aa2.74□□□□□ -1.97
PRPF38B-205ENST00000485810 A6NN06 94 aa2.74□□□□□ -1.97
PRPF38B-205ENST00000485810 ZNF815PA8K554 130 aa2.74□□□□□ -1.97
PRPF38B-205ENST00000485810 IBA57-AS1B1ANH7 110 aa2.74□□□□□ -1.97
PRPF38B-205ENST00000485810 M0QY20 66 aa2.74□□□□□ -1.97
PRPF38B-205ENST00000485810 GNRH2O43555 120 aa2.74□□□□□ -1.97
PRPF38B-205ENST00000485810 IGHV3-30P01768 117 aa2.74□□□□□ -1.97
PRPF38B-205ENST00000485810 IGHV3-30-5P0DP03 117 aa2.74□□□□□ -1.97
PRPF38B-205ENST00000485810 CMC4P56277 68 aaPredicted RBP2.74□□□□□ -1.97
PRPF38B-205ENST00000485810 MIAQ16674 131 aa2.74□□□□□ -1.97
PRPF38B-205ENST00000485810 RNASE13Q5GAN3 156 aaKnown RBP2.74□□□□□ -1.97
PRPF38B-205ENST00000485810 CFAP126Q5VTH2 177 aa2.74□□□□□ -1.97
PRPF38B-205ENST00000485810 NDUFA11Q86Y39 141 aa2.74□□□□□ -1.97
PRPF38B-205ENST00000485810 UPK3BQ9BT76 320 aa2.74□□□□□ -1.97
PRPF38B-205ENST00000485810 IGF2RP11717 2491 aa2.74□□□□□ -1.97
PRPF38B-205ENST00000485810 ABCA2Q9BZC7 2435 aa2.74□□□□□ -1.97
PRPF38B-205ENST00000485810 ATRXP46100 2492 aa2.74□□□□□ -1.97
PRPF38B-205ENST00000485810 A0A0B4J2C4 111 aa2.74□□□□□ -1.97
PRPF38B-205ENST00000485810 SLC25A20O43772 301 aa2.74□□□□□ -1.97
PRPF38B-205ENST00000485810 MSMBP08118 114 aa2.74□□□□□ -1.97
PRPF38B-205ENST00000485810 Q1T7F1 81 aa2.74□□□□□ -1.97
PRPF38B-205ENST00000485810 S100A7L2Q5SY68 101 aa2.74□□□□□ -1.97
PRPF38B-205ENST00000485810 TMEM170BQ5T4T1 132 aa2.74□□□□□ -1.97
PRPF38B-205ENST00000485810 C20orf203Q8NBC4 194 aa2.74□□□□□ -1.97
PRPF38B-205ENST00000485810 Q8NBF4 154 aa2.74□□□□□ -1.97
PRPF38B-205ENST00000485810 MUC4Q99102 2169 aa2.73□□□□□ -1.97
PRPF38B-205ENST00000485810 ADGRG4Q8IZF6 3080 aa2.73□□□□□ -1.97
PRPF38B-205ENST00000485810 hDV103S1A0JD37 113 aa2.73□□□□□ -1.97
PRPF38B-205ENST00000485810 TMEM223A0PJW6 202 aa2.73□□□□□ -1.97
PRPF38B-205ENST00000485810 A6NED7 52 aa2.73□□□□□ -1.97
PRPF38B-205ENST00000485810 B4DSR2 109 aa2.73□□□□□ -1.97
PRPF38B-205ENST00000485810 H3BUX3 64 aa2.73□□□□□ -1.97
PRPF38B-205ENST00000485810 I3L3M4 83 aa2.73□□□□□ -1.97
PRPF38B-205ENST00000485810 BPY2O14599 106 aa2.73□□□□□ -1.97
PRPF38B-205ENST00000485810 BCE1O60756 84 aa2.73□□□□□ -1.97
PRPF38B-205ENST00000485810 MGPP08493 103 aa2.73□□□□□ -1.97
PRPF38B-205ENST00000485810 CFC1BP0CG36 223 aa2.73□□□□□ -1.97
PRPF38B-205ENST00000485810 CFC1P0CG37 223 aa2.73□□□□□ -1.97
PRPF38B-205ENST00000485810 BRD3OSQ6XYD6 125 aa2.73□□□□□ -1.97
PRPF38B-205ENST00000485810 LINC00643Q86TS7 51 aa2.73□□□□□ -1.97
PRPF38B-205ENST00000485810 DYNLRB2Q8TF09 96 aa2.73□□□□□ -1.97
PRPF38B-205ENST00000485810 RETNLBQ9BQ08 111 aa2.73□□□□□ -1.97
PRPF38B-205ENST00000485810 COL6A6A6NMZ7 2263 aa2.72□□□□□ -1.97
PRPF38B-205ENST00000485810 BOD1L1Q8NFC6 3051 aa2.72□□□□□ -1.97
PRPF38B-205ENST00000485810 SPTAN1Q13813 2472 aaKnown RBP2.72□□□□□ -1.97
PRPF38B-205ENST00000485810 A0A096LNT2 108 aa2.72□□□□□ -1.97
PRPF38B-205ENST00000485810 LOC107984156A0A0G2JMH3 177 aa2.72□□□□□ -1.97
PRPF38B-205ENST00000485810 IGHV3-33P01772 117 aa2.72□□□□□ -1.97
PRPF38B-205ENST00000485810 DEFB1P60022 68 aa2.72□□□□□ -1.97
PRPF38B-205ENST00000485810 ARL17AQ8IVW1 177 aa2.72□□□□□ -1.97
PRPF38B-205ENST00000485810 LINC00269Q8N2A0 174 aa2.72□□□□□ -1.97
PRPF38B-205ENST00000485810 KLHL30-AS1Q8NEE0 82 aa2.72□□□□□ -1.97
PRPF38B-205ENST00000485810 CCL19Q99731 98 aa2.72□□□□□ -1.97
PRPF38B-205ENST00000485810 PRO1854Q9UHT4 67 aa2.72□□□□□ -1.97
PRPF38B-205ENST00000485810 CFAP47Q6ZTR5 3102 aa2.72□□□□□ -1.97
PRPF38B-205ENST00000485810 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.71□□□□□ -1.982e-9■■■■□ 25.9
PRPF38B-205ENST00000485810 HRNRQ86YZ3 2850 aaPredicted RBP2.71□□□□□ -1.98
PRPF38B-205ENST00000485810 DOPEY1Q5JWR5 2465 aa2.71□□□□□ -1.98
PRPF38B-205ENST00000485810 DMXL1Q9Y485 3027 aa2.71□□□□□ -1.98
PRPF38B-205ENST00000485810 TRAV12-3A0A0B4J271 114 aa2.71□□□□□ -1.98
PRPF38B-205ENST00000485810 TRBV30A0A0K0K1B3 111 aa2.71□□□□□ -1.98
PRPF38B-205ENST00000485810 ZNF22P17026 224 aaPredicted RBP2.71□□□□□ -1.98
PRPF38B-205ENST00000485810 RPL39P62891 51 aaKnown RBP2.71□□□□□ -1.98
PRPF38B-205ENST00000485810 LY6EQ16553 131 aa2.71□□□□□ -1.98
PRPF38B-205ENST00000485810 ESRGQ1W209 222 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms