RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.69□□□□□ -0.86
SIRPA-203ENST00000400068 SND1-IT1Q9HBX3 110 aa9.69□□□□□ -0.86
SIRPA-203ENST00000400068 KLK12Q9UKR0 248 aa9.69□□□□□ -0.86
SIRPA-203ENST00000400068 NOTCH1P46531 2555 aa9.69□□□□□ -0.86
SIRPA-203ENST00000400068 LINC00526Q96FQ7 95 aa9.69□□□□□ -0.86
SIRPA-203ENST00000400068 PRO0255Q9UI72 69 aa9.69□□□□□ -0.86
SIRPA-203ENST00000400068 IGLV1-51P01701 117 aa9.68□□□□□ -0.86
SIRPA-203ENST00000400068 Q9HAA7 133 aa9.68□□□□□ -0.86
SIRPA-203ENST00000400068 APCP25054 2843 aa9.68□□□□□ -0.86
SIRPA-203ENST00000400068 FSHBP01225 129 aa9.68□□□□□ -0.86
SIRPA-203ENST00000400068 LINC00269Q8N2A0 174 aa9.68□□□□□ -0.86
SIRPA-203ENST00000400068 CUBNO60494 3623 aa9.68□□□□□ -0.86
SIRPA-203ENST00000400068 LINC01620Q4KN68 170 aa9.67□□□□□ -0.86
SIRPA-203ENST00000400068 SPART-AS1P0CW21 52 aa9.67□□□□□ -0.86
SIRPA-203ENST00000400068 C11orf72Q8NBR9 251 aa9.67□□□□□ -0.86
SIRPA-203ENST00000400068 MIAQ16674 131 aa9.67□□□□□ -0.86
SIRPA-203ENST00000400068 Q8N2B8 174 aa9.66□□□□□ -0.86
SIRPA-203ENST00000400068 TRBV6-8A0A0A6YYG3 113 aa9.66□□□□□ -0.86
SIRPA-203ENST00000400068 SMIM26A0A096LP01 95 aa9.65□□□□□ -0.86
SIRPA-203ENST00000400068 UBE2D1P51668 147 aa9.65□□□□□ -0.86
SIRPA-203ENST00000400068 ADAMTSL4-AS1Q5T5F5 129 aa9.65□□□□□ -0.86
SIRPA-203ENST00000400068 LINC00242Q5T6M2 205 aa9.65□□□□□ -0.86
SIRPA-203ENST00000400068 DPH3Q96FX2 82 aa9.65□□□□□ -0.86
SIRPA-203ENST00000400068 MRPS36P82909 103 aaKnown RBP9.65□□□□□ -0.86
SIRPA-203ENST00000400068 TRIAP1O43715 76 aa9.64□□□□□ -0.87
SIRPA-203ENST00000400068 LINC01546A6NGU7 62 aa9.64□□□□□ -0.87
SIRPA-203ENST00000400068 IGLV4-60A0A075B6I1 120 aa9.64□□□□□ -0.87
SIRPA-203ENST00000400068 UBE2D3P61077 147 aa9.64□□□□□ -0.87
SIRPA-203ENST00000400068 UBE2D2P62837 147 aa9.64□□□□□ -0.87
SIRPA-203ENST00000400068 MXRA5Q9NR99 2828 aa9.64□□□□□ -0.87
SIRPA-203ENST00000400068 IGHV4-28A0A0C4DH34 117 aa9.63□□□□□ -0.87
SIRPA-203ENST00000400068 Q6Q795 121 aa9.63□□□□□ -0.87
SIRPA-203ENST00000400068 TRBV6-4A0A1B0GX49 114 aa9.63□□□□□ -0.87
SIRPA-203ENST00000400068 COX7A2LO14548 114 aa9.63□□□□□ -0.87
SIRPA-203ENST00000400068 SDIM1Q6ZPB5 146 aa9.62□□□□□ -0.87
SIRPA-203ENST00000400068 LINC00308Q8TCZ7 52 aa9.62□□□□□ -0.87
SIRPA-203ENST00000400068 CDC42SE2Q9NRR3 84 aa9.62□□□□□ -0.87
SIRPA-203ENST00000400068 RPS28P62857 69 aaKnown RBP9.61□□□□□ -0.87
SIRPA-203ENST00000400068 CR1P17927 2039 aa9.61□□□□□ -0.87
SIRPA-203ENST00000400068 H3BT86 120 aa9.61□□□□□ -0.87
SIRPA-203ENST00000400068 BAALC-AS2P0C853 105 aa9.61□□□□□ -0.87
SIRPA-203ENST00000400068 COL6A5A8TX70 2615 aa9.61□□□□□ -0.87
SIRPA-203ENST00000400068 IGKV2D-24A0A075B6R9 120 aa9.61□□□□□ -0.87
SIRPA-203ENST00000400068 GHRHP01286 108 aa9.61□□□□□ -0.87
SIRPA-203ENST00000400068 STAB1Q9NY15 2570 aa9.6□□□□□ -0.87
SIRPA-203ENST00000400068 NBEAL1Q6ZS30 2694 aa9.6□□□□□ -0.87
SIRPA-203ENST00000400068 BEAN1Q3B7T3 259 aa9.6□□□□□ -0.87
SIRPA-203ENST00000400068 TRAV13-2A0A0B4J235 113 aa9.6□□□□□ -0.87
SIRPA-203ENST00000400068 LINC00643Q86TS7 51 aa9.6□□□□□ -0.87
SIRPA-203ENST00000400068 AMELXQ99217 191 aa9.6□□□□□ -0.87
SIRPA-203ENST00000400068 SERTAD4-AS1Q5TG53 156 aa9.6□□□□□ -0.87
SIRPA-203ENST00000400068 NTM-AS1Q6ZSK4 140 aa9.6□□□□□ -0.87
SIRPA-203ENST00000400068 KRTAP1-3Q8IUG1 177 aa9.6□□□□□ -0.87
SIRPA-203ENST00000400068 TRAV23DV6A0A075B6W5 121 aa9.59□□□□□ -0.87
SIRPA-203ENST00000400068 LAMTOR3Q9UHA4 124 aa9.59□□□□□ -0.87
SIRPA-203ENST00000400068 A0A0B4J2C4 111 aa9.59□□□□□ -0.87
SIRPA-203ENST00000400068 NCR3O14931 201 aa9.58□□□□□ -0.88
SIRPA-203ENST00000400068 NDUFA1O15239 70 aa9.58□□□□□ -0.88
SIRPA-203ENST00000400068 HIGD2BQ4VC39 106 aa9.58□□□□□ -0.88
SIRPA-203ENST00000400068 LINC01561Q8N1V8 128 aa9.58□□□□□ -0.88
SIRPA-203ENST00000400068 CXCL5P42830 114 aa9.58□□□□□ -0.88
SIRPA-203ENST00000400068 REG3AQ06141 175 aa9.58□□□□□ -0.88
SIRPA-203ENST00000400068 FHL3Q13643 280 aa9.58□□□□□ -0.88
SIRPA-203ENST00000400068 SERP2Q8N6R1 65 aa9.58□□□□□ -0.88
SIRPA-203ENST00000400068 FHL2Q14192 279 aa9.58□□□□□ -0.88
SIRPA-203ENST00000400068 SMIM1B2RUZ4 78 aa9.57□□□□□ -0.88
SIRPA-203ENST00000400068 CD164Q04900 197 aa9.57□□□□□ -0.88
SIRPA-203ENST00000400068 CHCHD10Q8WYQ3 142 aaPredicted RBP9.57□□□□□ -0.88
SIRPA-203ENST00000400068 LECT2O14960 151 aa9.56□□□□□ -0.88
SIRPA-203ENST00000400068 IGHV4-30-4P0DP06 118 aa9.56□□□□□ -0.88
SIRPA-203ENST00000400068 SPAG11BQ08648 103 aa9.56□□□□□ -0.88
SIRPA-203ENST00000400068 C16orf95Q9H693 158 aa9.56□□□□□ -0.88
SIRPA-203ENST00000400068 ACYP1P07311 99 aa9.55□□□□□ -0.88
SIRPA-203ENST00000400068 LINC00959A0A1B0GUT2 108 aa9.55□□□□□ -0.88
SIRPA-203ENST00000400068 LRCOL1A6NCL2 159 aa9.55□□□□□ -0.88
SIRPA-203ENST00000400068 SLPIP03973 132 aa9.55□□□□□ -0.88
SIRPA-203ENST00000400068 TRBV10-2A0A0K0K1G8 114 aa9.55□□□□□ -0.88
SIRPA-203ENST00000400068 SNURFQ9Y675 71 aa9.55□□□□□ -0.88
SIRPA-203ENST00000400068 XAGE1AQ9HD64 81 aa9.54□□□□□ -0.88
SIRPA-203ENST00000400068 CAMK2N2Q96S95 79 aa9.53□□□□□ -0.88
SIRPA-203ENST00000400068 MDFIQ99750 246 aa9.53□□□□□ -0.88
SIRPA-203ENST00000400068 C9orf116Q5BN46 136 aaPredicted RBP9.53□□□□□ -0.88
SIRPA-203ENST00000400068 LYRM9A8MSI8 78 aa9.53□□□□□ -0.88
SIRPA-203ENST00000400068 HAMPP81172 84 aa9.53□□□□□ -0.88
SIRPA-203ENST00000400068 UBE2DNLQ8IWF7 75 aa9.52□□□□□ -0.88
SIRPA-203ENST00000400068 SERP1Q9Y6X1 66 aa9.52□□□□□ -0.88
SIRPA-203ENST00000400068 PRR3P79522 188 aaKnown RBP9.52□□□□□ -0.89
SIRPA-203ENST00000400068 Q8N3U1 123 aa9.51□□□□□ -0.89
SIRPA-203ENST00000400068 RPL18AQ02543 176 aaKnown RBP9.51□□□□□ -0.89
SIRPA-203ENST00000400068 USP17L23D6RBM5 183 aa9.51□□□□□ -0.89
SIRPA-203ENST00000400068 BSNQ9UPA5 3926 aa9.51□□□□□ -0.89
SIRPA-203ENST00000400068 FUSP35637 526 aaKnown RBP eCLIP9.5□□□□□ -0.89
SIRPA-203ENST00000400068 PSCAO43653 123 aa9.49□□□□□ -0.89
SIRPA-203ENST00000400068 CELA1Q9UNI1 258 aa9.49□□□□□ -0.89
SIRPA-203ENST00000400068 TRBV30A0A0K0K1B3 111 aa9.49□□□□□ -0.89
SIRPA-203ENST00000400068 MIFP14174 115 aa9.48□□□□□ -0.89
SIRPA-203ENST00000400068 EIF4EBP3O60516 100 aaPredicted RBP9.48□□□□□ -0.89
SIRPA-203ENST00000400068 IMUPQ9GZP8 106 aa9.48□□□□□ -0.89
SIRPA-203ENST00000400068 CCL18P55774 89 aa9.47□□□□□ -0.89
SIRPA-203ENST00000400068 KRTAP1-1Q07627 177 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms