RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-205	ENST00000535375	LELP1	Q5T871	98 aa		0.34	□□□□□ -2.36
PRKDC-205	ENST00000535375	THOC2	Q8NI27	1593 aa	Known RBP	0.34	□□□□□ -2.36
PRKDC-205	ENST00000535375	SCP2D1	Q9UJQ7	156 aa		0.34	□□□□□ -2.36
PRKDC-205	ENST00000535375	DYNC1H1	Q14204	4646 aa	Known RBP	0.34	□□□□□ -2.36
PRKDC-205	ENST00000535375	SPTBN1	Q01082	2364 aa	Known RBP	0.34	□□□□□ -2.36
PRKDC-205	ENST00000535375	CC2D2A	Q9P2K1	1620 aa		0.34	□□□□□ -2.36
PRKDC-205	ENST00000535375	BIVM-ERCC5	R4GMW8	1640 aa		0.34	□□□□□ -2.36
PRKDC-205	ENST00000535375	GOLGA3	Q08378	1498 aa		0.34	□□□□□ -2.36
PRKDC-205	ENST00000535375	DYNC2H1	Q8NCM8	4307 aa	Known RBP	0.34	□□□□□ -2.36
PRKDC-205	ENST00000535375	DNAH7	Q8WXX0	4024 aa		0.34	□□□□□ -2.36
PRKDC-205	ENST00000535375	FOCAD	Q5VW36	1801 aa		0.34	□□□□□ -2.36
PRKDC-205	ENST00000535375	MAPKBP1	O60336	1514 aa		0.33	□□□□□ -2.36
PRKDC-205	ENST00000535375	UNC13B	O14795	1591 aa		0.33	□□□□□ -2.36
PRKDC-205	ENST00000535375	LOC100130705	A0A1B0GUX0	176 aa		0.33	□□□□□ -2.36
PRKDC-205	ENST00000535375	FAM25A	B3EWG3	89 aa		0.33	□□□□□ -2.36
PRKDC-205	ENST00000535375	FAM25C	B3EWG5	89 aa		0.33	□□□□□ -2.36
PRKDC-205	ENST00000535375	FAM25G	B3EWG6	89 aa		0.33	□□□□□ -2.36
PRKDC-205	ENST00000535375	HCG22	E2RYF7	251 aa		0.33	□□□□□ -2.36
PRKDC-205	ENST00000535375	NMB	P08949	121 aa		0.33	□□□□□ -2.36
PRKDC-205	ENST00000535375	C12orf73	Q69YU5	71 aa		0.33	□□□□□ -2.36
PRKDC-205	ENST00000535375	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	0.33	□□□□□ -2.36
PRKDC-205	ENST00000535375	ARFGEF1	Q9Y6D6	1849 aa		0.33	□□□□□ -2.36
PRKDC-205	ENST00000535375	EFCAB6	Q5THR3	1501 aa		0.33	□□□□□ -2.36
PRKDC-205	ENST00000535375	LRP6	O75581	1613 aa		0.32	□□□□□ -2.36
PRKDC-205	ENST00000535375	EFCAB10	A6NFE3	127 aa		0.32	□□□□□ -2.36
PRKDC-205	ENST00000535375		G3V318	75 aa		0.32	□□□□□ -2.36
PRKDC-205	ENST00000535375	NAA60	Q9H7X0	242 aa		0.32	□□□□□ -2.36
PRKDC-205	ENST00000535375	DNAH1	Q9P2D7	4330 aa		0.32	□□□□□ -2.36
PRKDC-205	ENST00000535375	AKAP9	Q99996	3911 aa		0.32	□□□□□ -2.36
PRKDC-205	ENST00000535375	SLIT1	O75093	1534 aa		0.32	□□□□□ -2.36
PRKDC-205	ENST00000535375	ANK2	Q01484	3957 aa		0.31	□□□□□ -2.36
PRKDC-205	ENST00000535375	TMEM131L	A2VDJ0	1609 aa		0.31	□□□□□ -2.36
PRKDC-205	ENST00000535375	FGF7	P21781	194 aa		0.31	□□□□□ -2.36
PRKDC-205	ENST00000535375	MYOM1	P52179	1685 aa		0.3	□□□□□ -2.36
PRKDC-205	ENST00000535375	COL4A6	Q14031	1691 aa		0.3	□□□□□ -2.36
PRKDC-205	ENST00000535375	SPEF2	Q9C093	1822 aa		0.3	□□□□□ -2.36
PRKDC-205	ENST00000535375	TRAV13-2	A0A0B4J235	113 aa		0.3	□□□□□ -2.36
PRKDC-205	ENST00000535375	RBM3	P98179	157 aa	Known RBP	0.3	□□□□□ -2.36
PRKDC-205	ENST00000535375	WIZ	O95785	1651 aa		0.3	□□□□□ -2.36
PRKDC-205	ENST00000535375	DNAH9	Q9NYC9	4486 aa		0.3	□□□□□ -2.36
PRKDC-205	ENST00000535375	ALMS1	Q8TCU4	4167 aa		0.3	□□□□□ -2.36
PRKDC-205	ENST00000535375	MRC2	Q9UBG0	1479 aa		0.29	□□□□□ -2.36
PRKDC-205	ENST00000535375	MYO7A	Q13402	2215 aa		0.29	□□□□□ -2.36
PRKDC-205	ENST00000535375	NRK	Q7Z2Y5	1582 aa		0.29	□□□□□ -2.36
PRKDC-205	ENST00000535375	CMYA5	Q8N3K9	4069 aa		0.29	□□□□□ -2.36
PRKDC-205	ENST00000535375	TRAV1-2	A0A0B4J238	106 aa		0.29	□□□□□ -2.36
PRKDC-205	ENST00000535375	GCHFR	P30047	84 aa		0.29	□□□□□ -2.36
PRKDC-205	ENST00000535375	CCL18	P55774	89 aa		0.29	□□□□□ -2.36
PRKDC-205	ENST00000535375	SARNP	P82979	210 aa	Known RBP	0.29	□□□□□ -2.36
PRKDC-205	ENST00000535375		Q56UQ5	140 aa		0.29	□□□□□ -2.36
PRKDC-205	ENST00000535375	RPL13AP3	Q6NVV1	102 aa		0.29	□□□□□ -2.36
PRKDC-205	ENST00000535375	BAGE3	Q86Y29	109 aa		0.29	□□□□□ -2.36
PRKDC-205	ENST00000535375	FAT1	Q14517	4588 aa		0.28	□□□□□ -2.36
PRKDC-205	ENST00000535375	ANK3	Q12955	4377 aa	Known RBP	0.28	□□□□□ -2.36
PRKDC-205	ENST00000535375	PLEC	Q15149	4684 aa	Known RBP	0.28	□□□□□ -2.36
PRKDC-205	ENST00000535375	KRTAP19-6	Q3LI70	58 aa		0.28	□□□□□ -2.36
PRKDC-205	ENST00000535375	NWD2	Q9ULI1	1742 aa		0.27	□□□□□ -2.37
PRKDC-205	ENST00000535375	DOCK11	Q5JSL3	2073 aa		0.27	□□□□□ -2.37
PRKDC-205	ENST00000535375	PIGBOS1	A0A0B4J2F0	54 aa		0.27	□□□□□ -2.37
PRKDC-205	ENST00000535375	COX6A2	Q02221	97 aa		0.27	□□□□□ -2.37
PRKDC-205	ENST00000535375	ROCK2	O75116	1388 aa	Known RBP	0.27	□□□□□ -2.37
PRKDC-205	ENST00000535375	NAIP	Q13075	1403 aa		0.27	□□□□□ -2.37
PRKDC-205	ENST00000535375	FAT2	Q9NYQ8	4349 aa		0.27	□□□□□ -2.37
PRKDC-205	ENST00000535375	LYST	Q99698	3801 aa		0.26	□□□□□ -2.37
PRKDC-205	ENST00000535375	TET3	O43151	1660 aa		0.26	□□□□□ -2.37
PRKDC-205	ENST00000535375	QRICH2	Q9H0J4	1663 aa		0.26	□□□□□ -2.37
PRKDC-205	ENST00000535375	ACACA	Q13085	2346 aa		0.25	□□□□□ -2.37
PRKDC-205	ENST00000535375	PKDREJ	Q9NTG1	2253 aa		0.25	□□□□□ -2.37
PRKDC-205	ENST00000535375	IFT172	Q9UG01	1749 aa		0.25	□□□□□ -2.37
PRKDC-205	ENST00000535375	NWD1	Q149M9	1564 aa		0.25	□□□□□ -2.37
PRKDC-205	ENST00000535375	A2ML1	A8K2U0	1454 aa		0.25	□□□□□ -2.37
PRKDC-205	ENST00000535375	TRRAP	Q9Y4A5	3859 aa		0.25	□□□□□ -2.37
PRKDC-205	ENST00000535375	PP6455	Q8WZ26	134 aa		0.25	□□□□□ -2.37
PRKDC-205	ENST00000535375	PPP3R2	Q96LZ3	170 aa		0.25	□□□□□ -2.37
PRKDC-205	ENST00000535375	APOB	P04114	4563 aa	Known RBP	0.25	□□□□□ -2.37
PRKDC-205	ENST00000535375	CHD1	O14646	1710 aa		0.24	□□□□□ -2.37
PRKDC-205	ENST00000535375	KIF21B	O75037	1637 aa		0.24	□□□□□ -2.37
PRKDC-205	ENST00000535375	MRC1	P22897	1456 aa		0.24	□□□□□ -2.37
PRKDC-205	ENST00000535375	PPIP5K1	Q6PFW1	1433 aa		0.24	□□□□□ -2.37
PRKDC-205	ENST00000535375		A0A1B0GV90	55 aa		0.24	□□□□□ -2.37
PRKDC-205	ENST00000535375	PIN1P1	O15428	100 aa		0.24	□□□□□ -2.37
PRKDC-205	ENST00000535375	DLEU1	O43261	78 aa		0.24	□□□□□ -2.37
PRKDC-205	ENST00000535375	PPP1R17	O96001	155 aa		0.24	□□□□□ -2.37
PRKDC-205	ENST00000535375	C10orf128	Q5T292	105 aa		0.24	□□□□□ -2.37
PRKDC-205	ENST00000535375	DEFB123	Q8N688	67 aa		0.24	□□□□□ -2.37
PRKDC-205	ENST00000535375	AQP10	Q96PS8	301 aa		0.24	□□□□□ -2.37
PRKDC-205	ENST00000535375	SPANXD	Q9BXN6	97 aa		0.24	□□□□□ -2.37
PRKDC-205	ENST00000535375	LENEP	Q9Y5L5	61 aa		0.24	□□□□□ -2.37
PRKDC-205	ENST00000535375	ARAP2	Q8WZ64	1704 aa		0.24	□□□□□ -2.37
PRKDC-205	ENST00000535375	ASXL3	Q9C0F0	2248 aa		0.23	□□□□□ -2.37
PRKDC-205	ENST00000535375	DNAH5	Q8TE73	4624 aa		0.23	□□□□□ -2.37
PRKDC-205	ENST00000535375	MIF4GD	A9UHW6	222 aa	Known RBP	0.23	□□□□□ -2.37
PRKDC-205	ENST00000535375	APOC2	P02655	101 aa		0.23	□□□□□ -2.37
PRKDC-205	ENST00000535375	AKAIN1	P0CW23	69 aa		0.23	□□□□□ -2.37
PRKDC-205	ENST00000535375	PRO3102	Q9H379	93 aa		0.23	□□□□□ -2.37
PRKDC-205	ENST00000535375	TJP1	Q07157	1748 aa		0.23	□□□□□ -2.37
PRKDC-205	ENST00000535375	PRDM2	Q13029	1718 aa		0.23	□□□□□ -2.37
PRKDC-205	ENST00000535375	MADD	Q8WXG6	1647 aa		0.23	□□□□□ -2.37
PRKDC-205	ENST00000535375	MYH9	P35579	1960 aa	Known RBP	0.23	□□□□□ -2.37
PRKDC-205	ENST00000535375	CPSF1	Q10570	1443 aa	Known RBP	0.22	□□□□□ -2.37

Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms