RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Iah1Q9DB29 249 aa12.15□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 SisF8VQM5 1818 aa12.15□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 SvilQ8K4L3 2170 aa12.15□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Tmem91Q8C581 172 aa12.15□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Scrt1Q99M85 348 aa12.15□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 OtorQ9JIE3 128 aa12.15□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Nat6Q9R123 314 aa12.15□□□□□ -0.46
Pcdha1-201ENSMUST00000070797 Zfp420Q7TMN8 578 aa12.14□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Gtsf1lQ9CWD0 151 aa12.14□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Tmem238A9JSM3 176 aa12.14□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Rspo3Q2TJ95 277 aa12.14□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Olfr1381Q7TQT4 311 aa12.14□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Oxld1Q9CR10 201 aa12.14□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Q9D727 114 aa12.14□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 EppinQ9DA01 134 aa12.14□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Il17bQ9QXT6 180 aa12.14□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Vdac2Q60930 295 aaKnown RBP12.14□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Slc25a29Q8BL03 306 aa12.14□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Olfr1323Q8VF35 309 aa12.14□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Olfr491Q8VG06 310 aa12.14□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 H2al3Q9D4U4 128 aa12.14□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Trav14n-3A0A075B645 120 aa12.14□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Gm5819E9PZ96 154 aa12.14□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Ociad2Q9D8W7 154 aa12.14□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Gm45521A0A1B0GRK0 198 aa12.14□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Gm21974F6W3F3 119 aa12.14□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Csrp2P97314 193 aaKnown RBP12.14□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Mbnl2Q8C181 373 aaKnown RBP12.14□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 QrfpQ8CE23 124 aa12.14□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Znrf1Q91V17 227 aa12.14□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Ighv5-9A0A075B5Q2 117 aa12.13□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Tcrg-V6A0A075B5Y8 134 aa12.13□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Igkv6-32A0A140T8N9 115 aa12.13□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Tmem8bB1AWJ5 472 aa12.13□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 P18528 98 aa12.13□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Jsrp1Q3MI48 332 aa12.13□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Dtx1Q61010 627 aa12.13□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Rnase6Q9D244 153 aa12.13□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 P01634 136 aa12.13□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Ndufc2Q9CQ54 120 aa12.13□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Obox1Q9D350 204 aa12.13□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Ca5aP23589 299 aa12.13□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 MdfiP70331 251 aa12.13□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Spred3Q6P6N5 408 aa12.13□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Plekhb2Q9QZC7 221 aa12.13□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Gm27021M0QWE2 156 aa12.13□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Dlx6P70397 175 aa12.13□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Znf22Q9ERU3 237 aa12.13□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Hs3st3b1Q9QZS6 390 aa12.13□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Bcorl1A2AQH4 1781 aa12.12□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Ighv1-18A0A0A6YXN4 117 aa12.12□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Fndc7A2AED3 737 aa12.12□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Gm6793B2RXM2 351 aa12.12□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Gm21789J3QMZ1 123 aa12.12□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Gm21870J3QPN2 123 aa12.12□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Gm21883J3QPV3 123 aa12.12□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Gm16686Q3UMN9 131 aa12.12□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Snrnp40Q6PE01 358 aa12.12□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Fbxl15Q91W61 300 aa12.12□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Nup214Q80U93 2085 aa12.12□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Clec4b2Q67DU8 208 aa12.12□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 MycbQ6P8Z1 170 aa12.12□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Dynlrb2Q9DAJ5 96 aa12.12□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 SptbP15508 2128 aa12.12□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Ssbp4Q3U4B1 363 aa12.12□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Hspe1Q64433 102 aaKnown RBP12.12□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 MetrnQ8C1Q4 291 aa12.12□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Susd3Q9D176 269 aa12.12□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Tex36Q9D5N9 219 aa12.12□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Gm9920D3YVZ2 140 aa12.11□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Defa26Q3L180 93 aa12.11□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Tdrd6P61407 2134 aa12.11□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Gm9733Q1AN91 178 aa12.11□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Iba57Q8CAK1 358 aaKnown RBP12.11□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Alpk2Q91ZB0 2144 aa12.11□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Trdv1A0A075B657 112 aa12.11□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Gm37388A0A0A6YY46 143 aa12.11□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Vmn1r1E9PVR6 306 aa12.11□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Igfbpl1Q80W15 270 aa12.11□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Prima1Q810F0 153 aa12.11□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Gm35549A0A0N4SUS7 141 aa12.11□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Smr2O09133 150 aa12.11□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 AdipoqQ60994 247 aa12.11□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Igkv4-51A0N8I8 119 aa12.1□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Gm7849D3YX03 116 aa12.1□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Pgpep1Q9ESW8 209 aa12.1□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Gm10020E9QAZ2 204 aa12.1□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 P01638 115 aa12.1□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 GalmQ8K157 342 aa12.1□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Rpl15Q9CZM2 204 aaKnown RBP12.1□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Defa-rs2P17534 91 aa12.1□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Lhfpl1Q80SV1 220 aa12.1□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Dmrtc1c1Q9D410 238 aa12.1□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Iglv3A0A0B4J1K5 122 aa12.1□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 H2al2bA9Z055 111 aa12.1□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Zfp976E9Q981 636 aa12.1□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Klk10Q99M20 278 aa12.1□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Gm10762Q9CZN6 115 aa12.1□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Dctn5Q9QZB9 182 aa12.1□□□□□ -0.47
Pcdha1-201ENSMUST00000070797 Gm10881P01642 115 aa12.09□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms