RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 C1ql2Q8CFR0 287 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Hist1h2bkQ8CGP1 126 aaKnown RBP13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Hist1h2bpQ8CGP2 126 aaKnown RBP13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Parm1Q923D3 296 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Igkv3-2A0A075B5P0 119 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Trav16nA0A075B634 117 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Rnase2aQ8K196 155 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Sec16aA2AIX1 2377 aa13.25□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Gm28038F7BCN9 126 aa13.25□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Znrf1Q91V17 227 aa13.25□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Dnase2bQ9QY48 354 aa13.25□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Nav3Q80TN7 2359 aa13.25□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Col11a1Q61245 1804 aa13.25□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Il2raP01590 268 aa13.25□□□□□ -0.29
Ubr3-201ENSMUST00000055758 PtprfA2A8L5 1898 aa13.25□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Igkv10-94A0A075B5L1 115 aa13.25□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Trbv1A0A0B4J1G7 116 aa13.25□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Fam53bQ8BGR5 422 aa13.25□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Slurp1Q9Z0K7 110 aa13.25□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Gatad1Q920S3 266 aa13.25□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Saa3P04918 122 aa13.25□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Tmem170aQ9D342 144 aa13.25□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Ccl17F6R5P4 103 aa13.24□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Lbhd2G3UW55 114 aa13.24□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Sc5dO88822 299 aa13.24□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Zic3Q62521 466 aa13.24□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Fam19a2Q7TPG7 131 aa13.24□□□□□ -0.29
Ubr3-201ENSMUST00000055758 4930583I09RikQ9D2E3 102 aa13.24□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Gng5Q80SZ7 68 aa13.24□□□□□ -0.29
Ubr3-201ENSMUST00000055758 SNORCQ9CXL7 121 aa13.24□□□□□ -0.29
Ubr3-201ENSMUST00000055758 1700013G24RikQ9DAC6 286 aa13.24□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Ifitm7G3X9Z2 141 aa13.24□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Nr2c2apQ3TV70 140 aa13.24□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Psg17Q62056 475 aa13.24□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Gpbar1Q80SS6 329 aa13.24□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Ighv1-22A0A075B5U7 117 aa13.24□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Spint5J3KMK8 105 aa13.24□□□□□ -0.29
Ubr3-201ENSMUST00000055758 D430019H16RikJ3QPM6 83 aa13.24□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Nkx2-8O70584 235 aa13.24□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Slc25a16Q8C0K5 332 aa13.24□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Ndufb8Q9D6J5 186 aa13.24□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Col9a1Q05722 921 aa13.23□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Zfp248Q640N4 576 aa13.23□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Morn3Q8C5T4 241 aa13.23□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Prss46Q5M8S2 314 aa13.23□□□□□ -0.29
Ubr3-201ENSMUST00000055758 SlaQ60898 281 aa13.23□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Fam214bQ8BR27 538 aa13.23□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Vmn1r235Q8R297 328 aa13.23□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Zfp72Q0VFY0 435 aa13.23□□□□□ -0.29
Ubr3-201ENSMUST00000055758 C1ql4Q4ZJM9 238 aa13.23□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Gng7Q61016 68 aa13.23□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Tomm40Q9QYA2 361 aa13.23□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Trav14d-1A0A075B6B1 121 aa13.23□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Gm45213A0A0U1RNZ6 101 aa13.23□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Tmem238A9JSM3 176 aa13.23□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Hdgfl3Q9JMG7 202 aa13.23□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Gm21983D6RFS9 131 aa13.23□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Col4a1P02463 1669 aa13.22□□□□□ -0.29
Ubr3-201ENSMUST00000055758 1700025B11RikA0A087WNZ6 93 aa13.22□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Eid2bE9Q2Y0 151 aa13.22□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Gtf3aQ8VHT7 364 aa13.22□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Ndufa2Q9CQ75 99 aa13.22□□□□□ -0.29
Ubr3-201ENSMUST00000055758 SelenokQ9JLJ1 94 aa13.22□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Cdkn1bP46414 197 aa13.22□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Ccl11P48298 97 aa13.22□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Anapc10Q8K2H6 185 aa13.22□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Cysltr1Q99JA4 352 aa13.22□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Tnfsf14Q9QYH9 239 aa13.22□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Dpm2Q9Z324 84 aa13.22□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Ube2wQ8VDW4 151 aa13.22□□□□□ -0.29
Ubr3-201ENSMUST00000055758 OpalinQ7M750 143 aa13.21□□□□□ -0.29
Ubr3-201ENSMUST00000055758 E430018J23RikE9PZQ8 461 aa13.21□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Gm5615Q3UW02 101 aa13.21□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Olfr491Q8VG06 310 aa13.21□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Ighv5-16A0A0B4J1P4 117 aa13.21□□□□□ -0.29
Ubr3-201ENSMUST00000055758 GrhprQ91Z53 328 aa13.21□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Egr1P08046 533 aa13.21□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Dmrt3Q80WT2 476 aa13.21□□□□□ -0.3
Ubr3-201ENSMUST00000055758 HrkP62816 92 aa13.2□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Ripply2Q2WG76 128 aa13.2□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Shisa6Q3UH99 525 aa13.2□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Tmem29A2ANF5 204 aa13.2□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Tmem258P61166 79 aa13.2□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Cox19Q8K0C8 92 aa13.2□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Sh3bgrl3Q91VW3 93 aa13.2□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Gtsf1lQ9CWD0 151 aa13.2□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Rnf217D3YYI7 515 aa13.2□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Tmem241Q3UME2 297 aa13.2□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Tmem40Q4FJU9 225 aa13.2□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Mrpl36Q99N90 102 aa13.2□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Foxl1Q64731 336 aa13.2□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Mrps18cQ8R2L5 143 aaKnown RBP13.2□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Trav2Q5R1I9 109 aa13.2□□□□□ -0.3
Ubr3-201ENSMUST00000055758 GaptQ8CB93 157 aa13.2□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Trbv31A0A075B5J5 111 aa13.2□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Ssc4dA1L0T3 586 aa13.2□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Ndufa3Q9CQ91 84 aa13.2□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Igkv4-80A0A075B5L7 116 aa13.19□□□□□ -0.3
Ubr3-201ENSMUST00000055758 Ighv9-3A0A0B4J1J5 117 aa13.19□□□□□ -0.3
Ubr3-201ENSMUST00000055758 AgmatA2AS89 358 aa13.19□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 46.9 ms