RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Olfr148Q60887 310 aa8.46□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Olfr904Q7TRC9 310 aa8.46□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Cdcp2Q8BQH6 427 aa8.46□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 C1qtnf5Q8K479 243 aa8.46□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Ndufa11Q9D8B4 141 aa8.46□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Hcfc2Q9D968 241 aa8.46□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Gpr35Q9ES90 307 aa8.46□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 GlmpQ9JHJ3 404 aa8.46□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Dusp14Q9JLY7 198 aa8.46□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Anapc1P53995 1944 aaKnown RBP8.46□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Scgb1b11A0A087WQJ0 93 aa8.45□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Tmem170bP86050 132 aa8.45□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Tmem219Q9D123 240 aa8.45□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Timm23Q9WTQ8 209 aa8.45□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Opn3Q9WUK7 400 aa8.45□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Gtf3c1Q8K284 2101 aa8.45□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Trav7n-4A0A075B620 113 aa8.45□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Trav3n-3A0A0G2JEM0 114 aa8.45□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Gng5Q80SZ7 68 aa8.45□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Sh3bgrl3Q91VW3 93 aa8.45□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Lypd8Q9D7S0 255 aa8.45□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 A0A1L1SR50 188 aa8.45□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Gm17660B9UIU9 90 aa8.45□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Defa37K9J724 93 aa8.45□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Defa5P28312 93 aa8.45□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Snrnp40Q6PE01 358 aa8.45□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Q8CF25 301 aa8.45□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Necap2Q9D1J1 266 aa8.45□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Tcrg-V4A0A0B4J1J8 138 aa8.45□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Zcchc24B2RVL6 241 aaKnown RBP8.45□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Igh-3P01867 404 aa8.45□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Gm10842Q3U587 122 aa8.45□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Rnase2aQ8K196 155 aa8.45□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 TprF6ZDS4 2431 aaKnown RBP8.45□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 P01801 115 aa8.44□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Znf474Q6V5K9 347 aa8.44□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Klk10Q99M20 278 aa8.44□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Gm10306Q9CUK2 115 aa8.44□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 1700067P10RikG3X8U2 183 aa8.44□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Klrd1O54707 179 aa8.44□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Lcn2P11672 200 aa8.44□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Fgf5P15656 264 aa8.44□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Gm10803Q3TZS6 135 aa8.44□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Rnf224Q3UIW8 156 aa8.44□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Slc35d2Q762D5 326 aa8.44□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 OtosQ8R448 89 aa8.44□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Olfr1012Q8VFJ7 311 aa8.44□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 P18528 98 aa8.44□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Htr1dQ61224 374 aa8.44□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 C730034F03RikQ8BGL5 111 aa8.44□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Rnase6Q9D244 153 aa8.44□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Defb3Q9WTL0 63 aa8.44□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Omt2bD3YX29 119 aa8.44□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Smim13E9Q942 88 aa8.44□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 DdtO35215 118 aa8.44□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Q9D8L0 127 aa8.44□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 CompQ9R0G6 755 aa8.44□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 EsdQ9R0P3 282 aa8.44□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Trdv1A0A075B657 112 aa8.43□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 AvpP35455 168 aa8.43□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Id3P41133 119 aa8.43□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Znf329Q6GQR8 522 aa8.43□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 9430097D07RikQ8BS47 195 aa8.43□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 QrfpQ8CE23 124 aa8.43□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 CcsQ9WU84 274 aa8.43□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Spsb3Q571F5 354 aa8.43□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Lypd1Q8BLC3 141 aa8.43□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Fam110aQ8R184 296 aa8.43□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Mrps11Q9DCA2 191 aaKnown RBP8.43□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Prok2Q9QXU7 128 aa8.43□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Rai1Q61818 1889 aa8.43□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Gm9376G3UW68 176 aa8.43□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 P01726 129 aa8.43□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 PpoxP51175 477 aa8.43□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Cacng7P62956 275 aa8.43□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Rbmxl2Q9DAE2 385 aaKnown RBP8.43□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Reg1P43137 165 aa8.43□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 YrdcQ3U5F4 280 aa8.43□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Hspe1Q64433 102 aaKnown RBP8.43□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Lhfpl1Q80SV1 220 aa8.43□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 LitafQ9JLJ0 161 aa8.43□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Wfdc11A2A5H7 82 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Olfr235E9Q9Z6 312 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 GrnP28798 589 aaKnown RBP8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Olfr1209Q3SXJ3 310 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Prima1Q810F0 153 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Saxo2Q8BQB6 394 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Ighv5-9A0A075B5Q2 117 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Trbv3A0A0A6YYE2 117 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Olfr1337A2ACY8 315 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Foxh1O88621 401 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Svs5P30933 122 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Cops9Q3U898 57 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Vdac2Q60930 295 aaKnown RBP8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 G0s2Q61585 103 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Q80X32 188 aaKnown RBP8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Vmn1r70Q8R254 298 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Olfr810Q8VFH9 312 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Susd2Q9DBX3 820 aa8.42□□□□□ -1.06
Ccdc40-201ENSMUST00000035935 Tpsg1Q9QUL7 311 aa8.42□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 113.5 ms