RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 KIR2DL4Q99706 377 aa2.37□□□□□ -2.03
SEC23A-207ENST00000554615 GOLGA4Q13439 2230 aaKnown RBP2.37□□□□□ -2.03
SEC23A-207ENST00000554615 A4D1N5 150 aa2.37□□□□□ -2.03
SEC23A-207ENST00000554615 IBA57-AS1B1ANH7 110 aa2.37□□□□□ -2.03
SEC23A-207ENST00000554615 F6UB75 175 aa2.37□□□□□ -2.03
SEC23A-207ENST00000554615 AZU1P20160 251 aa2.37□□□□□ -2.03
SEC23A-207ENST00000554615 INSL3P51460 131 aa2.37□□□□□ -2.03
SEC23A-207ENST00000554615 EGFEM1PQ0D2K5 195 aa2.37□□□□□ -2.03
SEC23A-207ENST00000554615 ATXN8Q156A1 80 aa2.37□□□□□ -2.03
SEC23A-207ENST00000554615 RNF151Q2KHN1 245 aa2.37□□□□□ -2.03
SEC23A-207ENST00000554615 FAM159AQ6UWV7 190 aa2.37□□□□□ -2.03
SEC23A-207ENST00000554615 TMEM219Q86XT9 240 aa2.37□□□□□ -2.03
SEC23A-207ENST00000554615 ANKRD29Q8N6D5 301 aa2.37□□□□□ -2.03
SEC23A-207ENST00000554615 LINC00482Q8N8I6 264 aa2.37□□□□□ -2.03
SEC23A-207ENST00000554615 ASH1LQ9NR48 2969 aaKnown RBP2.37□□□□□ -2.03
SEC23A-207ENST00000554615 APELAP0DMC3 54 aa2.37□□□□□ -2.03
SEC23A-207ENST00000554615 PRB3Q04118 309 aaPredicted RBP2.37□□□□□ -2.03
SEC23A-207ENST00000554615 COPS9Q8WXC6 57 aa2.37□□□□□ -2.03
SEC23A-207ENST00000554615 LINC01587Q99440 93 aa2.37□□□□□ -2.03
SEC23A-207ENST00000554615 UBTD1Q9HAC8 227 aa2.37□□□□□ -2.03
SEC23A-207ENST00000554615 S4R3C0 116 aa2.37□□□□□ -2.03
SEC23A-207ENST00000554615 A0A1B0GW54 56 aa2.36□□□□□ -2.03
SEC23A-207ENST00000554615 INSP01308 110 aa2.36□□□□□ -2.03
SEC23A-207ENST00000554615 IGHV3-11P01762 117 aa2.36□□□□□ -2.03
SEC23A-207ENST00000554615 TLX1NBP0CAT3 122 aa2.36□□□□□ -2.03
SEC23A-207ENST00000554615 CD28P10747 220 aa2.36□□□□□ -2.03
SEC23A-207ENST00000554615 HILS1P60008 231 aa2.36□□□□□ -2.03
SEC23A-207ENST00000554615 VAMP3Q15836 100 aa2.36□□□□□ -2.03
SEC23A-207ENST00000554615 C10orf99Q6UWK7 81 aa2.36□□□□□ -2.03
SEC23A-207ENST00000554615 SMCR5Q8TEV8 140 aa2.36□□□□□ -2.03
SEC23A-207ENST00000554615 KLK5Q9Y337 293 aaPredicted RBP2.36□□□□□ -2.03
SEC23A-207ENST00000554615 IGKV3-20P01619 116 aa2.36□□□□□ -2.03
SEC23A-207ENST00000554615 IGLV6-57P01721 117 aa2.36□□□□□ -2.03
SEC23A-207ENST00000554615 Q6JHZ5 121 aa2.36□□□□□ -2.03
SEC23A-207ENST00000554615 SPATA3Q8NHX4 192 aa2.36□□□□□ -2.03
SEC23A-207ENST00000554615 NHP2Q9NX24 153 aaKnown RBP2.36□□□□□ -2.03
SEC23A-207ENST00000554615 KRTAP4-16G5E9R7 235 aaPredicted RBP2.36□□□□□ -2.03
SEC23A-207ENST00000554615 FXYD7P58549 80 aa2.36□□□□□ -2.03
SEC23A-207ENST00000554615 RPS28P62857 69 aaKnown RBP2.36□□□□□ -2.03
SEC23A-207ENST00000554615 C11orf68Q9H3H3 251 aaKnown RBP2.36□□□□□ -2.03
SEC23A-207ENST00000554615 Q9UF83 564 aa2.36□□□□□ -2.03
SEC23A-207ENST00000554615 A0A0J9YXV3 536 aa2.35□□□□□ -2.03
SEC23A-207ENST00000554615 HES1Q14469 280 aa2.35□□□□□ -2.03
SEC23A-207ENST00000554615 C18orf65Q6ZTR6 163 aa2.35□□□□□ -2.03
SEC23A-207ENST00000554615 C6orf223Q8N319 242 aa2.35□□□□□ -2.03
SEC23A-207ENST00000554615 KLHL30-AS1Q8NEE0 82 aa2.35□□□□□ -2.03
SEC23A-207ENST00000554615 TMSB15BA0A087X1C1 80 aa2.35□□□□□ -2.03
SEC23A-207ENST00000554615 DNAJC9-AS1A6NH13 148 aa2.35□□□□□ -2.03
SEC23A-207ENST00000554615 LYRM9A8MSI8 78 aa2.35□□□□□ -2.03
SEC23A-207ENST00000554615 SLC25A20O43772 301 aa2.35□□□□□ -2.03
SEC23A-207ENST00000554615 PRSS1P07477 247 aa2.35□□□□□ -2.03
SEC23A-207ENST00000554615 CRYGAP11844 174 aa2.35□□□□□ -2.03
SEC23A-207ENST00000554615 KPRPQ5T749 579 aaPredicted RBP2.35□□□□□ -2.03
SEC23A-207ENST00000554615 BBC3Q96PG8 261 aaPredicted RBP2.35□□□□□ -2.03
SEC23A-207ENST00000554615 HIST1H4GQ99525 98 aa2.35□□□□□ -2.03
SEC23A-207ENST00000554615 KRTAP4-11Q9BYQ6 195 aa2.35□□□□□ -2.03
SEC23A-207ENST00000554615 DNAH5Q8TE73 4624 aa2.35□□□□□ -2.03
SEC23A-207ENST00000554615 SLPIP03973 132 aa2.34□□□□□ -2.03
SEC23A-207ENST00000554615 DEFB1P60022 68 aa2.34□□□□□ -2.03
SEC23A-207ENST00000554615 BRD3OSQ6XYD6 125 aa2.34□□□□□ -2.03
SEC23A-207ENST00000554615 STHQ8IWL8 128 aa2.34□□□□□ -2.03
SEC23A-207ENST00000554615 FAM218AQ96MZ4 157 aa2.34□□□□□ -2.03
SEC23A-207ENST00000554615 PLCE1Q9P212 2302 aa2.34□□□□□ -2.03
SEC23A-207ENST00000554615 ANKRD11Q6UB99 2663 aaPredicted RBP2.34□□□□□ -2.03
SEC23A-207ENST00000554615 IGHV3-64A0A075B6Q5 118 aa2.34□□□□□ -2.03
SEC23A-207ENST00000554615 TRAV12-3A0A0B4J271 114 aa2.34□□□□□ -2.03
SEC23A-207ENST00000554615 SPRR1AP35321 89 aa2.34□□□□□ -2.03
SEC23A-207ENST00000554615 TNP2Q05952 138 aa2.34□□□□□ -2.03
SEC23A-207ENST00000554615 Q8NAQ8 132 aa2.34□□□□□ -2.03
SEC23A-207ENST00000554615 PRSS2P07478 247 aa2.34□□□□□ -2.04
SEC23A-207ENST00000554615 CSMD2Q7Z408 3487 aa2.34□□□□□ -2.04
SEC23A-207ENST00000554615 TRBV6-8A0A0A6YYG3 113 aa2.33□□□□□ -2.04
SEC23A-207ENST00000554615 MT-ATP8P03928 68 aa2.33□□□□□ -2.04
SEC23A-207ENST00000554615 SLURP1P55000 103 aa2.33□□□□□ -2.04
SEC23A-207ENST00000554615 ATP5EP2Q5VTU8 51 aa2.33□□□□□ -2.04
SEC23A-207ENST00000554615 SH2D6Q7Z4S9 175 aa2.33□□□□□ -2.04
SEC23A-207ENST00000554615 CDKN2A-AS1Q9UH64 79 aa2.33□□□□□ -2.04
SEC23A-207ENST00000554615 ERC2-IT1O76042 136 aa2.33□□□□□ -2.04
SEC23A-207ENST00000554615 RPL11P62913 178 aaKnown RBP2.33□□□□□ -2.04
SEC23A-207ENST00000554615 HIST2H2BDQ6DRA6 164 aa2.33□□□□□ -2.04
SEC23A-207ENST00000554615 LINC00337Q8N6G1 96 aa2.33□□□□□ -2.04
SEC23A-207ENST00000554615 IGLV8-61A0A075B6I0 122 aa2.33□□□□□ -2.04
SEC23A-207ENST00000554615 NDUFC2-KCTD14E9PQ53 114 aa2.33□□□□□ -2.04
SEC23A-207ENST00000554615 J3QR89 54 aa2.33□□□□□ -2.04
SEC23A-207ENST00000554615 Q8NDZ9 215 aa2.33□□□□□ -2.04
SEC23A-207ENST00000554615 OPRPNQ99935 248 aaPredicted RBP2.33□□□□□ -2.04
SEC23A-207ENST00000554615 NDUFA12Q9UI09 145 aa2.33□□□□□ -2.04
SEC23A-207ENST00000554615 CACNA1AO00555 2505 aa2.33□□□□□ -2.04
SEC23A-207ENST00000554615 APOBP04114 4563 aaKnown RBP2.33□□□□□ -2.04
SEC23A-207ENST00000554615 H0YGX0 51 aa2.32□□□□□ -2.04
SEC23A-207ENST00000554615 NDUFV3P56181 108 aaKnown RBP2.32□□□□□ -2.04
SEC23A-207ENST00000554615 LINC00643Q86TS7 51 aa2.32□□□□□ -2.04
SEC23A-207ENST00000554615 LINC01006Q8NI28 216 aa2.32□□□□□ -2.04
SEC23A-207ENST00000554615 CADP27708 2225 aa2.32□□□□□ -2.04
SEC23A-207ENST00000554615 TRAV13-2A0A0B4J235 113 aa2.32□□□□□ -2.04
SEC23A-207ENST00000554615 TRBV7-4A0A0J9YYF1 115 aa2.32□□□□□ -2.04
SEC23A-207ENST00000554615 LGALS3P17931 250 aaKnown RBP2.32□□□□□ -2.04
SEC23A-207ENST00000554615 LINC01547P58512 204 aaPredicted RBP2.32□□□□□ -2.04
SEC23A-207ENST00000554615 KRTAP10-9P60411 292 aa2.32□□□□□ -2.04
SEC23A-207ENST00000554615 SPINK13Q1W4C9 94 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms