RNA–Protein interactions for RNA: ENST00000477552.1

PTPRD-209, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 4

Gene PTPRD, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-209ENST00000477552 CENPEQ02224 2701 aa6.04□□□□□ -1.44
PTPRD-209ENST00000477552 USP24Q9UPU5 2620 aa6.03□□□□□ -1.44
PTPRD-209ENST00000477552 IGHV3-73A0A0B4J1V6 119 aa6.03□□□□□ -1.44
PTPRD-209ENST00000477552 TRBV10-2A0A0K0K1G8 114 aa6.03□□□□□ -1.44
PTPRD-209ENST00000477552 ADARB2-AS1A8MUL3 147 aa6.03□□□□□ -1.44
PTPRD-209ENST00000477552 RPL13AP40429 203 aaKnown RBP6.03□□□□□ -1.44
PTPRD-209ENST00000477552 MRPL23Q16540 153 aaKnown RBP6.03□□□□□ -1.44
PTPRD-209ENST00000477552 SH2D6Q7Z4S9 175 aa6.03□□□□□ -1.44
PTPRD-209ENST00000477552 ANKRD29Q8N6D5 301 aa6.03□□□□□ -1.44
PTPRD-209ENST00000477552 LITAFQ99732 161 aa6.03□□□□□ -1.44
PTPRD-209ENST00000477552 SELENOKQ9Y6D0 94 aa6.03□□□□□ -1.44
PTPRD-209ENST00000477552 LINC01620Q4KN68 170 aa6.02□□□□□ -1.45
PTPRD-209ENST00000477552 C18orf65Q6ZTR6 163 aa6.02□□□□□ -1.45
PTPRD-209ENST00000477552 Q6ZUT4 128 aa6.02□□□□□ -1.45
PTPRD-209ENST00000477552 LINC01561Q8N1V8 128 aa6.02□□□□□ -1.45
PTPRD-209ENST00000477552 KIR2DL5BQ8NHK3 375 aa6.02□□□□□ -1.45
PTPRD-209ENST00000477552 LINC01006Q8NI28 216 aa6.02□□□□□ -1.45
PTPRD-209ENST00000477552 FAM104AQ969W3 186 aa6.02□□□□□ -1.45
PTPRD-209ENST00000477552 BBC3Q96PG8 261 aaPredicted RBP6.02□□□□□ -1.45
PTPRD-209ENST00000477552 ICOSQ9Y6W8 199 aa6.02□□□□□ -1.45
PTPRD-209ENST00000477552 PTPN13Q12923 2485 aa6.01□□□□□ -1.45
PTPRD-209ENST00000477552 TRGV2A0A075B6R0 118 aa6.01□□□□□ -1.45
PTPRD-209ENST00000477552 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-209ENST00000477552 IGKV2-29A2NJV5 120 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-209ENST00000477552 C9JAW5 83 aa6.01□□□□□ -1.45
PTPRD-209ENST00000477552 PRB1P04280 392 aa6.01□□□□□ -1.45
PTPRD-209ENST00000477552 HILS1P60008 231 aa6.01□□□□□ -1.45
PTPRD-209ENST00000477552 KRTAP10-9P60411 292 aa6.01□□□□□ -1.45
PTPRD-209ENST00000477552 LINC00242Q5T6M2 205 aa6.01□□□□□ -1.45
PTPRD-209ENST00000477552 FAM222AQ5U5X8 452 aa6.01□□□□□ -1.45
PTPRD-209ENST00000477552 CDC42SE2Q9NRR3 84 aa6.01□□□□□ -1.45
PTPRD-209ENST00000477552 CDKN2A-AS1Q9UH64 79 aa6.01□□□□□ -1.45
PTPRD-209ENST00000477552 ZANQ9Y493 2812 aa6.01□□□□□ -1.45
PTPRD-209ENST00000477552 IGHV3OR16-12A0A075B7B8 117 aa6□□□□□ -1.45
PTPRD-209ENST00000477552 TRAV13-2A0A0B4J235 113 aa6□□□□□ -1.45
PTPRD-209ENST00000477552 TRGV4A0A0C4DH28 118 aa6□□□□□ -1.45
PTPRD-209ENST00000477552 FAM240AA0A1B0GVK7 77 aa6□□□□□ -1.45
PTPRD-209ENST00000477552 ACYP1P07311 99 aa6□□□□□ -1.45
PTPRD-209ENST00000477552 SPINK8P0C7L1 97 aa6□□□□□ -1.45
PTPRD-209ENST00000477552 SMCPP49901 116 aaPredicted RBP6□□□□□ -1.45
PTPRD-209ENST00000477552 PROK1P58294 105 aa6□□□□□ -1.45
PTPRD-209ENST00000477552 C21orf62-AS1Q17RA5 79 aa6□□□□□ -1.45
PTPRD-209ENST00000477552 Q6ZSN1 163 aa6□□□□□ -1.45
PTPRD-209ENST00000477552 CITED2Q99967 270 aaPredicted RBP6□□□□□ -1.45
PTPRD-209ENST00000477552 APCP25054 2843 aa6□□□□□ -1.45
PTPRD-209ENST00000477552 IGHV3-64A0A075B6Q5 118 aa5.99□□□□□ -1.45
PTPRD-209ENST00000477552 TRAV8-3A0A0A6YYJ7 113 aa5.99□□□□□ -1.45
PTPRD-209ENST00000477552 SMIM1B2RUZ4 78 aa5.99□□□□□ -1.45
PTPRD-209ENST00000477552 PRIMA1Q86XR5 153 aa5.99□□□□□ -1.45
PTPRD-209ENST00000477552 C11orf44Q8N8P7 122 aa5.99□□□□□ -1.45
PTPRD-209ENST00000477552 J3QKU1 62 aa5.98□□□□□ -1.45
PTPRD-209ENST00000477552 LST1O00453 97 aa5.98□□□□□ -1.45
PTPRD-209ENST00000477552 TRIAP1O43715 76 aa5.98□□□□□ -1.45
PTPRD-209ENST00000477552 MEIG1Q5JSS6 88 aa5.98□□□□□ -1.45
PTPRD-209ENST00000477552 CEMP1Q6PRD7 247 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-209ENST00000477552 Q6Q795 121 aa5.98□□□□□ -1.45
PTPRD-209ENST00000477552 Q6ZTI0 123 aa5.98□□□□□ -1.45
PTPRD-209ENST00000477552 WFDC11Q8NEX6 87 aa5.98□□□□□ -1.45
PTPRD-209ENST00000477552 MUC7Q8TAX7 377 aa5.98□□□□□ -1.45
PTPRD-209ENST00000477552 LINC00308Q8TCZ7 52 aa5.98□□□□□ -1.45
PTPRD-209ENST00000477552 Q9H8V8 135 aa5.98□□□□□ -1.45
PTPRD-209ENST00000477552 NOP10Q9NPE3 64 aaKnown RBP5.98□□□□□ -1.45
PTPRD-209ENST00000477552 ITPR3Q14573 2671 aa5.97□□□□□ -1.45
PTPRD-209ENST00000477552 CHD6Q8TD26 2715 aa5.97□□□□□ -1.45
PTPRD-209ENST00000477552 A0A1B0GUV1 79 aa5.97□□□□□ -1.45
PTPRD-209ENST00000477552 COX7A2LO14548 114 aa5.97□□□□□ -1.45
PTPRD-209ENST00000477552 TRACP01848 142 aa5.97□□□□□ -1.45
PTPRD-209ENST00000477552 DEFB121Q5J5C9 76 aa5.97□□□□□ -1.45
PTPRD-209ENST00000477552 C2orf82Q6UX34 121 aa5.97□□□□□ -1.45
PTPRD-209ENST00000477552 UBE2WQ96B02 151 aa5.97□□□□□ -1.45
PTPRD-209ENST00000477552 ZNF625Q96I27 306 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-209ENST00000477552 ESM1Q9NQ30 184 aa5.97□□□□□ -1.45
PTPRD-209ENST00000477552 ABCA12Q86UK0 2595 aa5.96□□□□□ -1.46
PTPRD-209ENST00000477552 TRBV6-8A0A0A6YYG3 113 aa5.96□□□□□ -1.46
PTPRD-209ENST00000477552 IGHV3-38A0A0C4DH36 116 aa5.96□□□□□ -1.46
PTPRD-209ENST00000477552 A0A1W2PRX2 142 aa5.96□□□□□ -1.46
PTPRD-209ENST00000477552 GAGE12JA6NER3 117 aa5.96□□□□□ -1.46
PTPRD-209ENST00000477552 LYRM9A8MSI8 78 aa5.96□□□□□ -1.46
PTPRD-209ENST00000477552 IBA57-AS1B1ANH7 110 aa5.96□□□□□ -1.46
PTPRD-209ENST00000477552 H0YGX0 51 aa5.96□□□□□ -1.46
PTPRD-209ENST00000477552 GAGE4Q13068 117 aa5.96□□□□□ -1.46
PTPRD-209ENST00000477552 GAGE5Q13069 117 aa5.96□□□□□ -1.46
PTPRD-209ENST00000477552 ADAMTSL4-AS1Q5T5F5 129 aa5.96□□□□□ -1.46
PTPRD-209ENST00000477552 LINC00612Q8N6U2 182 aa5.96□□□□□ -1.46
PTPRD-209ENST00000477552 CSNK1G2-AS1Q8NCQ2 148 aa5.96□□□□□ -1.46
PTPRD-209ENST00000477552 DEFB104AQ8WTQ1 72 aa5.96□□□□□ -1.46
PTPRD-209ENST00000477552 C19orf73Q9NVV2 129 aa5.96□□□□□ -1.46
PTPRD-209ENST00000477552 FBN2P35556 2912 aa5.96□□□□□ -1.46
PTPRD-209ENST00000477552 POLQO75417 2590 aa5.95□□□□□ -1.46
PTPRD-209ENST00000477552 TRAV13-1A0A0B4J241 112 aa5.95□□□□□ -1.46
PTPRD-209ENST00000477552 F5H768 121 aa5.95□□□□□ -1.46
PTPRD-209ENST00000477552 H7C2G1 150 aa5.95□□□□□ -1.46
PTPRD-209ENST00000477552 SNCGO76070 127 aa5.95□□□□□ -1.46
PTPRD-209ENST00000477552 C9orf66Q5T8R8 295 aa5.95□□□□□ -1.46
PTPRD-209ENST00000477552 HIST2H2BCQ6DN03 193 aa5.95□□□□□ -1.46
PTPRD-209ENST00000477552 HIST2H2BDQ6DRA6 164 aa5.95□□□□□ -1.46
PTPRD-209ENST00000477552 SHISA2Q6UWI4 295 aa5.95□□□□□ -1.46
PTPRD-209ENST00000477552 NTM-AS1Q6ZSK4 140 aa5.95□□□□□ -1.46
PTPRD-209ENST00000477552 COX7B2Q8TF08 81 aa5.95□□□□□ -1.46
PTPRD-209ENST00000477552 KRTAP3-3Q9BYR6 98 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms