RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Gm17732E9Q5I2 61 aa9.17□□□□□ -0.94
Scn8a-203ENSMUST00000108908 RhogP84096 191 aa9.17□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Slc17a9Q8VCL5 447 aa9.17□□□□□ -0.94
Scn8a-203ENSMUST00000108908 2200002J24RikQ9D807 110 aa9.17□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Igkv14-126A0A075B5K0 117 aa9.17□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Zfp72Q0VFY0 435 aa9.17□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Msrb2Q78J03 175 aa9.17□□□□□ -0.94
Scn8a-203ENSMUST00000108908 MgamB5THE2 1827 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Psg18B2RSG7 476 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Zfp977L7N2E7 438 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 CrygsO35486 178 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 MpzP27573 248 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Rpl23P62830 140 aaKnown RBP9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Hcfc2Q9D968 241 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Crim1Q9JLL0 1037 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Trav7n-5A0A075B604 112 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Olfr177E9Q7W1 309 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 GchfrP99025 84 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Olfr1419Q7TQS2 343 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Ormdl3Q9CPZ6 153 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Tmem126aQ9D8Y1 196 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Hils1Q9QYL0 170 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Trav7-4A0A075B6C1 113 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Trav7d-4Q5R1H9 113 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Rbfox3Q8BIF2 374 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Gm17334Q8C6U3 126 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Cbln3Q9JHG0 197 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Trav16nA0A075B634 117 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Trbv19A0A0B4J1H4 117 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 P04212 136 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Ube2d2bQ6ZWY6 147 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Zg16Q8K0C5 167 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Atp23Q9CWQ3 201 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Necap2Q9D1J1 266 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Rnase6Q9D244 153 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 B1ARW8 110 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Gm21874J3QNZ6 232 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Zfp36P22893 319 aaKnown RBP9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Il1f10Q8R459 152 aa9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 ChtopQ9CY57 249 aaKnown RBP9.16□□□□□ -0.94
Scn8a-203ENSMUST00000108908 1700025B11RikA0A087WNZ6 93 aa9.15□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Prdm6Q3UZD5 596 aa9.15□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Vmn1r216Q8R257 298 aa9.15□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Sh3bgrl3Q91VW3 93 aa9.15□□□□□ -0.94
Scn8a-203ENSMUST00000108908 CenpvQ9CXS4 252 aa9.15□□□□□ -0.94
Scn8a-203ENSMUST00000108908 CfdP03953 259 aa9.15□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Fmc1Q9CR13 113 aa9.15□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Olfr810Q8VFH9 312 aa9.15□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Dusp14Q9JLY7 198 aa9.15□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Gpr132Q9Z282 382 aa9.15□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Mcrip2Q9CQB2 160 aaKnown RBP9.15□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Med12lQ8BQM9 2157 aa9.15□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Bdp1Q571C7 2467 aa9.15□□□□□ -0.94
Scn8a-203ENSMUST00000108908 Reg1P43137 165 aa9.15□□□□□ -0.95
Scn8a-203ENSMUST00000108908 ApohQ01339 345 aa9.15□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Bsph1Q3UW26 133 aa9.15□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Tnfsf15Q5UBV8 252 aa9.15□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Rbm38Q62176 237 aaKnown RBP9.15□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Try10Q792Z1 246 aaKnown RBP9.15□□□□□ -0.95
Scn8a-203ENSMUST00000108908 BC106179Q8C9L1 186 aa9.15□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Avpi1Q9D7H4 142 aa9.15□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Slc25a15Q9WVD5 301 aa9.15□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Tcrg-V5A0A0G2JGV5 113 aa9.15□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Tmem29A2ANF5 204 aa9.15□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Rnf217D3YYI7 515 aa9.15□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Efnb3O35393 340 aa9.15□□□□□ -0.95
Scn8a-203ENSMUST00000108908 SbpP15501 199 aa9.15□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Ighv1-22A0A075B5U7 117 aa9.14□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Igkv4-51A0N8I8 119 aa9.14□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Htr1dQ61224 374 aa9.14□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Zic3Q62521 466 aa9.14□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Q80X32 188 aaKnown RBP9.14□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Myo7bQ99MZ6 2113 aa9.14□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Gm17430F6RSK3 157 aa9.14□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Shisal1Q0VBP7 198 aa9.14□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Tmem91Q8C581 172 aa9.14□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Plp1P60202 277 aa9.14□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Prr23a3Q9CWP9 254 aa9.14□□□□□ -0.95
Scn8a-203ENSMUST00000108908 SelenokQ9JLJ1 94 aa9.14□□□□□ -0.95
Scn8a-203ENSMUST00000108908 1700031F05RikB1AX30 191 aa9.14□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Gm20825J3QM67 227 aa9.14□□□□□ -0.95
Scn8a-203ENSMUST00000108908 P01655 112 aa9.14□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Ssty2Q149W4 227 aa9.14□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Hyls1Q9CXX0 307 aa9.14□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Sfrp4Q9Z1N6 351 aa9.14□□□□□ -0.95
Scn8a-203ENSMUST00000108908 LfngO09010 378 aa9.13□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Rchy1Q9CR50 261 aa9.13□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Rp1l1Q8CGM2 1859 aa9.13□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Greb1Q3UHK3 1954 aa9.13□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Q9D727 114 aa9.13□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Iah1Q9DB29 249 aa9.13□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Trav6-1A0A075B5Z8 112 aa9.13□□□□□ -0.95
Scn8a-203ENSMUST00000108908 A0A1Y7VLU2 103 aa9.13□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Tnfsf11O35235 316 aa9.13□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Immp2lQ8BPT6 175 aa9.13□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Med12A2AGH6 2190 aa9.13□□□□□ -0.95
Scn8a-203ENSMUST00000108908 C1ql4Q4ZJM9 238 aa9.13□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Trdv4Q5R1A3 115 aa9.13□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Rpl36-ps4A0A140T8U4 117 aa9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 PpyP10601 100 aa9.12□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 85.2 ms