RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Gm21775J3KMK6 180 aa17.94■□□□□ 0.46
Scn1b-201ENSMUST00000098548 P01643 108 aa17.94■□□□□ 0.46
Scn1b-201ENSMUST00000098548 P01915 264 aa17.94■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Tmem95P0DJF3 176 aa17.94■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Arg1Q61176 323 aa17.94■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Rsl1Q7M6Y1 485 aa17.94■□□□□ 0.46
Scn1b-201ENSMUST00000098548 EtdQ80SW5 59 aa17.94■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Pgam5Q8BX10 288 aa17.94■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Olfr1258Q8VGN6 311 aa17.94■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Ms4a6bQ99N09 244 aa17.94■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Mixl1Q9WUI0 231 aa17.94■□□□□ 0.46
Scn1b-201ENSMUST00000098548 MtorQ9JLN9 2549 aa17.93■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Gm28372A0A087WNV0 220 aa17.93■□□□□ 0.46
Scn1b-201ENSMUST00000098548 AsmtD3KU66 387 aa17.93■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Gm3250E9Q1M3 230 aa17.93■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Zfp708F8VPP0 541 aa17.93■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Gm21913J3KML9 361 aa17.93■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Gm21776J3QPJ5 361 aa17.93■□□□□ 0.46
Scn1b-201ENSMUST00000098548 IfngP01580 155 aa17.93■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Olfr43Q7TRX1 313 aa17.93■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Fam78bQ8BQN5 261 aa17.93■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Tmem189Q99LQ7 271 aa17.93■□□□□ 0.46
Scn1b-201ENSMUST00000098548 ManfQ9CXI5 179 aaKnown RBP17.93■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Sgms2Q9D4B1 365 aa17.93■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Rhox4bQ9JI43 205 aa17.93■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Opn3Q9WUK7 400 aa17.93■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Akirin2B1AXD8 201 aa17.92■□□□□ 0.46
Scn1b-201ENSMUST00000098548 P01790 122 aa17.92■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Olfr1434Q7TQR9 312 aa17.92■□□□□ 0.46
Scn1b-201ENSMUST00000098548 9230109A22RikQ8BHE6 111 aa17.92■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Olfr1102Q8VES2 324 aa17.92■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Olfr1412Q8VET3 321 aa17.92■□□□□ 0.46
Scn1b-201ENSMUST00000098548 CklfQ9DAS1 152 aa17.92■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Bhlha15Q9QYC3 197 aa17.92■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Trav6n-5A0A075B621 112 aa17.91■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Trav6-5A0A075B6B5 112 aa17.91■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Gm20422E9PUR3 255 aa17.91■□□□□ 0.46
Scn1b-201ENSMUST00000098548 SrstQ06666 185 aa17.91■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Usp9yF8VPU6 2556 aa17.91■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Pfdn2O70591 154 aa17.91■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Rab19P35294 217 aa17.91■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Reg1P43137 165 aa17.91■□□□□ 0.46
Scn1b-201ENSMUST00000098548 SeleQ00690 612 aa17.91■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Vmn1r195Q5SVD6 316 aa17.91■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Bst1Q64277 311 aa17.91■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Olfr411Q7TRW8 315 aa17.91■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Cbln2Q8BGU2 224 aa17.91■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Olfr958Q8VEY3 312 aa17.91■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Olfr654Q8VF27 341 aa17.91■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Scgb3a2Q920H1 91 aa17.91■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Mrpl27Q99N92 148 aa17.91■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Tagln2Q9WVA4 199 aaKnown RBP17.91■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Ighv6-4A0A0A6YX19 119 aa17.9■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Igkv14-130A0A0G2JF45 117 aa17.9■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Tstd1E9PY03 133 aa17.9■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Rbfox2Q8BP71 449 aaKnown RBP17.9■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Cox19Q8K0C8 92 aa17.9■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Uqcc1Q9CWU6 295 aa17.9■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Rnd2Q9QYM5 227 aa17.9■□□□□ 0.46
Scn1b-201ENSMUST00000098548 Gm28845A0A087WR76 214 aa17.89■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Gm21994F6T2D2 329 aa17.89■□□□□ 0.45
Scn1b-201ENSMUST00000098548 P04944 107 aa17.89■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Igfbp1P47876 272 aa17.89■□□□□ 0.45
Scn1b-201ENSMUST00000098548 CluQ06890 448 aa17.89■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Defb30Q30KN4 75 aa17.89■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Gm17334Q8C6U3 126 aa17.89■□□□□ 0.45
Scn1b-201ENSMUST00000098548 PifoQ9D9W1 207 aa17.89■□□□□ 0.45
Scn1b-201ENSMUST00000098548 PigpQ9JHG1 132 aa17.89■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Ighv3-1A0A075B5S6 116 aa17.88■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Nat8f7E0CYR6 227 aa17.88■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Olfr196E9PYP4 309 aa17.88■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Mamld1P0C6A2 803 aa17.88■□□□□ 0.45
Scn1b-201ENSMUST00000098548 AdtrpQ8C138 230 aa17.88■□□□□ 0.45
Scn1b-201ENSMUST00000098548 A930004D18RikQ8C8W7 157 aa17.88■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Mad2l1bpQ9DCX1 276 aa17.88■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Arpc1aQ9R0Q6 370 aa17.88■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Igfn1Q3KNY0 2849 aa17.88■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Ighv1-55A0A075B5W6 117 aa17.87■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Trav23A0A0G2JG17 115 aa17.87■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Psg19Q4KL31 475 aa17.87■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Psg22Q810J1 475 aa17.87■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Tusc5Q8C838 173 aa17.87■□□□□ 0.45
Scn1b-201ENSMUST00000098548 RpeQ8VEE0 228 aa17.87■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Dok5Q91ZM9 306 aa17.87■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Necap2Q9D1J1 266 aa17.87■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Gpa33Q9JKA5 319 aa17.87■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Ighv8-2A0A0A6YW58 119 aa17.87■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Olfr978E9Q985 311 aa17.87■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Gm4791J3QQ14 102 aa17.87■□□□□ 0.45
Scn1b-201ENSMUST00000098548 P01788 123 aa17.87■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Ctdsp1P58466 261 aa17.87■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Fam24aQ8CF27 98 aa17.87■□□□□ 0.45
Scn1b-201ENSMUST00000098548 H2al1jA2BFR3 109 aa17.86■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Amn1B8JKV0 258 aa17.86■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Gstp2P46425 210 aa17.86■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Dynlt3P56387 116 aa17.86■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Zfand3Q497H0 227 aa17.86■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Znrf2Q71FD5 238 aa17.86■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Cldn16Q925N4 235 aa17.86■□□□□ 0.45
Scn1b-201ENSMUST00000098548 Rpp25lQ99JH1 163 aa17.86■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms