Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Gm25239-201ENSMUST00000174915 86 ntBASIC27.7■■■□□ 2.02
Pfdn2O70591 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Pfdn2O70591 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Pfdn2O70591 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Pfdn2O70591 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Pfdn2O70591 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
Pfdn2O70591 Psd-208ENSMUST00000224556 2034 ntBASIC25.57■■□□□ 1.68
Pfdn2O70591 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Pfdn2O70591 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Pfdn2O70591 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.99■■□□□ 1.59
Pfdn2O70591 Gm15042-201ENSMUST00000120212 883 ntBASIC24.86■■□□□ 1.57
Pfdn2O70591 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Pfdn2O70591 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pfdn2O70591 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pfdn2O70591 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pfdn2O70591 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pfdn2O70591 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Pfdn2O70591 Gm15045-201ENSMUST00000117359 883 ntBASIC24.31■■□□□ 1.48
Pfdn2O70591 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Pfdn2O70591 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Pfdn2O70591 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pfdn2O70591 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pfdn2O70591 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.19■■□□□ 1.46
Pfdn2O70591 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pfdn2O70591 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pfdn2O70591 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Pfdn2O70591 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pfdn2O70591 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pfdn2O70591 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pfdn2O70591 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pfdn2O70591 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pfdn2O70591 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pfdn2O70591 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pfdn2O70591 Gm24109-201ENSMUST00000175489 103 ntBASIC23.65■■□□□ 1.38
Pfdn2O70591 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.63■■□□□ 1.37
Pfdn2O70591 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pfdn2O70591 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pfdn2O70591 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pfdn2O70591 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.51■■□□□ 1.35
Pfdn2O70591 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pfdn2O70591 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pfdn2O70591 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Pfdn2O70591 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pfdn2O70591 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.4■■□□□ 1.34
Pfdn2O70591 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pfdn2O70591 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pfdn2O70591 Gm23366-201ENSMUST00000175022 89 ntBASIC23.34■■□□□ 1.33
Pfdn2O70591 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pfdn2O70591 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Pfdn2O70591 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pfdn2O70591 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pfdn2O70591 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pfdn2O70591 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.28■■□□□ 1.32
Pfdn2O70591 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Pfdn2O70591 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pfdn2O70591 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pfdn2O70591 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pfdn2O70591 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.08■■□□□ 1.29
Pfdn2O70591 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Pfdn2O70591 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pfdn2O70591 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.96■■□□□ 1.27
Pfdn2O70591 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pfdn2O70591 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.93■■□□□ 1.26
Pfdn2O70591 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.93■■□□□ 1.26
Pfdn2O70591 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pfdn2O70591 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Pfdn2O70591 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pfdn2O70591 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Pfdn2O70591 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.82■■□□□ 1.24
Pfdn2O70591 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Pfdn2O70591 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pfdn2O70591 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Pfdn2O70591 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Pfdn2O70591 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Pfdn2O70591 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pfdn2O70591 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pfdn2O70591 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pfdn2O70591 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pfdn2O70591 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pfdn2O70591 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pfdn2O70591 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pfdn2O70591 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pfdn2O70591 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pfdn2O70591 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pfdn2O70591 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.42■■□□□ 1.18
Pfdn2O70591 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.4■■□□□ 1.18
Pfdn2O70591 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Pfdn2O70591 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pfdn2O70591 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pfdn2O70591 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pfdn2O70591 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.33■■□□□ 1.16
Pfdn2O70591 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pfdn2O70591 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Pfdn2O70591 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pfdn2O70591 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pfdn2O70591 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.27■■□□□ 1.16
Pfdn2O70591 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pfdn2O70591 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pfdn2O70591 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Pfdn2O70591 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms