RNA–Protein interactions for RNA: snR62

snR62, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR62, Length 100 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR62	snR62	DIN7	Q12086	430 aa		0.3	□□□□□ -2.36
snR62	snR62	DAP1	Q12091	152 aa		0.3	□□□□□ -2.36
snR62	snR62	HOP1	P20050	605 aa		0.29	□□□□□ -2.36
snR62	snR62	NAP1	P25293	417 aa	Known RBP	0.29	□□□□□ -2.36
snR62	snR62	ARE1	P25628	610 aa		0.29	□□□□□ -2.36
snR62	snR62	MSN2	P33748	704 aa		0.29	□□□□□ -2.36
snR62	snR62	DHR2	P36009	735 aa	Predicted RBP	0.29	□□□□□ -2.36
snR62	snR62	EFM2	P38347	419 aa		0.29	□□□□□ -2.36
snR62	snR62	RPN10	P38886	268 aa	Known RBP	0.29	□□□□□ -2.36
snR62	snR62	TIF4631	P39935	952 aa	Known RBP	0.29	□□□□□ -2.36
snR62	snR62	YJL107C	P42947	387 aa		0.29	□□□□□ -2.36
snR62	snR62	FDC1	Q03034	503 aa		0.29	□□□□□ -2.36
snR62	snR62	IZH1	Q03419	316 aa		0.29	□□□□□ -2.36
snR62	snR62	RAD33	Q04231	177 aa		0.29	□□□□□ -2.36
snR62	snR62	YMR254C	Q04838	102 aa		0.29	□□□□□ -2.36
snR62	snR62	AAC1	P04710	309 aa		0.28	□□□□□ -2.36
snR62	snR62	PCK1	P10963	549 aa		0.28	□□□□□ -2.36
snR62	snR62	CAP1	P28495	268 aa	Known RBP	0.28	□□□□□ -2.36
snR62	snR62	RPL8B	P29453	256 aa	Known RBP	0.28	□□□□□ -2.36
snR62	snR62	PET127	P32606	800 aa		0.28	□□□□□ -2.36
snR62	snR62	YEL045C	P32616	141 aa		0.28	□□□□□ -2.36
snR62	snR62	KES1	P35844	434 aa	Known RBP	0.28	□□□□□ -2.36
snR62	snR62	MCD4	P36051	919 aa		0.28	□□□□□ -2.36
snR62	snR62	YHR202W	P38887	602 aa		0.28	□□□□□ -2.36
snR62	snR62	ERP6	P53198	216 aa		0.28	□□□□□ -2.36
snR62	snR62	RCR2	Q03446	210 aa	Known RBP	0.28	□□□□□ -2.36
snR62	snR62	USA1	Q03714	838 aa		0.28	□□□□□ -2.36
snR62	snR62	COG8	Q04632	607 aa		0.28	□□□□□ -2.36
snR62	snR62	TDA5	Q06417	326 aa	Known RBP	0.28	□□□□□ -2.36
snR62	snR62	PRP22	P24384	1145 aa	Known RBP	0.27	□□□□□ -2.37
snR62	snR62	PPG1	P32838	368 aa		0.27	□□□□□ -2.37
snR62	snR62	PRS1	P32895	427 aa	Known RBP	0.27	□□□□□ -2.37
snR62	snR62	ERV46	P39727	415 aa		0.27	□□□□□ -2.37
snR62	snR62	ESBP6	P53918	673 aa		0.27	□□□□□ -2.37
snR62	snR62	YLR112W	Q12130	139 aa		0.27	□□□□□ -2.37
snR62	snR62	RTC1	Q08281	1341 aa		0.27	□□□□□ -2.37
snR62	snR62	YPK1	P12688	680 aa	Known RBP	0.26	□□□□□ -2.37
snR62	snR62	MIH1	P23748	554 aa		0.26	□□□□□ -2.37
snR62	snR62	MSH1	P25846	959 aa		0.26	□□□□□ -2.37
snR62	snR62	SSZ1	P38788	538 aa	Known RBP	0.26	□□□□□ -2.37
snR62	snR62	CRG1	P38892	291 aa	RIP-Chip data	0.26	□□□□□ -2.37	not detected
snR62	snR62	MAD1	P40957	749 aa		0.26	□□□□□ -2.37
snR62	snR62	CIR1	P42940	261 aa		0.26	□□□□□ -2.37
snR62	snR62	ATG27	P46989	271 aa		0.26	□□□□□ -2.37
snR62	snR62	VPS25	P47142	202 aa		0.26	□□□□□ -2.37
snR62	snR62	ACS1	Q01574	713 aa		0.26	□□□□□ -2.37
snR62	snR62	ARP9	Q05123	467 aa		0.26	□□□□□ -2.37
snR62	snR62	YDL124W	Q07551	312 aa	Known RBP	0.26	□□□□□ -2.37
snR62	snR62	PIN2	Q12057	282 aa		0.26	□□□□□ -2.37
snR62	snR62	LYS21	Q12122	440 aa	Known RBP	0.26	□□□□□ -2.37
snR62	snR62	OSH2	Q12451	1283 aa		0.26	□□□□□ -2.37
snR62	snR62	BI3	Q9ZZW7	517 aa		0.26	□□□□□ -2.37
snR62	snR62	BAR1	P12630	587 aa		0.25	□□□□□ -2.37
snR62	snR62	RAD4	P14736	754 aa		0.25	□□□□□ -2.37
snR62	snR62	GDA1	P32621	518 aa		0.25	□□□□□ -2.37
snR62	snR62	RAD24	P32641	659 aa		0.25	□□□□□ -2.37
snR62	snR62	MNN4	P36044	1178 aa		0.25	□□□□□ -2.37
snR62	snR62	RIM2	P38127	377 aa		0.25	□□□□□ -2.37
snR62	snR62	YEL025C	P39991	1188 aa		0.25	□□□□□ -2.37
snR62	snR62	YML020W	Q03722	664 aa		0.25	□□□□□ -2.37
snR62	snR62	PAL1	Q05518	499 aa	Known RBP	0.25	□□□□□ -2.37
snR62	snR62	TMC1	Q08422	150 aa	Predicted RBP	0.25	□□□□□ -2.37
snR62	snR62	GAL11	P19659	1081 aa		0.24	□□□□□ -2.37
snR62	snR62	IMG2	P25642	146 aa	Predicted RBP	0.24	□□□□□ -2.37
snR62	snR62	FTR1	P40088	404 aa		0.24	□□□□□ -2.37
snR62	snR62	YMR210W	Q03649	449 aa		0.24	□□□□□ -2.37
snR62	snR62	RAD34	Q06665	692 aa		0.24	□□□□□ -2.37
snR62	snR62	CIT2	P08679	460 aa		0.23	□□□□□ -2.37
snR62	snR62	MTC2	P34246	357 aa		0.23	□□□□□ -2.37
snR62	snR62	PBP2	P38151	413 aa	Known RBP RIP-Chip data	0.23	□□□□□ -2.37	not detected
snR62	snR62	NUG1	P40010	520 aa	Known RBP	0.23	□□□□□ -2.37
snR62	snR62	BUD8	P41698	603 aa		0.23	□□□□□ -2.37
snR62	snR62	TIS11	P47977	285 aa		0.23	□□□□□ -2.37
snR62	snR62	ORC5	P50874	479 aa		0.23	□□□□□ -2.37
snR62	snR62	YGL039W	P53183	348 aa	Known RBP	0.23	□□□□□ -2.37
snR62	snR62	MTD1	Q02046	320 aa	Known RBP	0.23	□□□□□ -2.37
snR62	snR62	GLN4	P13188	809 aa	Known RBP	0.22	□□□□□ -2.37
snR62	snR62	IME1	P21190	360 aa		0.22	□□□□□ -2.37
snR62	snR62	TRS65	P32893	560 aa		0.22	□□□□□ -2.37
snR62	snR62	BET3	P36149	193 aa		0.22	□□□□□ -2.37
snR62	snR62	ARN1	P38731	627 aa		0.22	□□□□□ -2.37
snR62	snR62	PXA1	P41909	870 aa		0.22	□□□□□ -2.37
snR62	snR62	YNL092W	P53934	400 aa		0.22	□□□□□ -2.37
snR62	snR62	GPD1	Q00055	391 aa	Known RBP	0.22	□□□□□ -2.37
snR62	snR62	NHX1	Q04121	633 aa		0.22	□□□□□ -2.37
snR62	snR62	ECI1	Q05871	280 aa		0.22	□□□□□ -2.37
snR62	snR62	HSP60	P19882	572 aa	Known RBP	0.21	□□□□□ -2.38
snR62	snR62	RRP43	P25359	394 aa	Predicted RBP	0.21	□□□□□ -2.38
snR62	snR62	SWC3	P31376	625 aa		0.21	□□□□□ -2.38
snR62	snR62	SFP1	P32432	683 aa		0.21	□□□□□ -2.38
snR62	snR62	RPN2	P32565	945 aa	Known RBP	0.21	□□□□□ -2.38
snR62	snR62	CDS1	P38221	457 aa		0.21	□□□□□ -2.38
snR62	snR62	NOP2	P40991	618 aa	Known RBP	0.21	□□□□□ -2.38
snR62	snR62	YJR039W	P47107	1121 aa		0.21	□□□□□ -2.38
snR62	snR62	SNP1	Q00916	300 aa	Predicted RBP	0.21	□□□□□ -2.38
snR62	snR62	SMA1	Q02651	245 aa		0.21	□□□□□ -2.38
snR62	snR62	TAF8	Q03750	510 aa		0.21	□□□□□ -2.38
snR62	snR62	ARR3	Q06598	404 aa		0.21	□□□□□ -2.38
snR62	snR62	PRE4	P30657	266 aa		0.2	□□□□□ -2.38
snR62	snR62	STO1	P34160	861 aa	Known RBP	0.2	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 102.8 ms