RNA–Protein interactions for RNA: YPR029C

APL4, Transcript of Gamma-adaptin, yeast

Gene APL4, Length 2,499 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL4	YPR029C	MAK5	P38112	773 aa	Predicted RBP	3.88	□□□□□ -1.79
APL4	YPR029C	NTC20	P38302	140 aa	Predicted RBP	3.88	□□□□□ -1.79
APL4	YPR029C	YHR054C	P38780	354 aa		3.88	□□□□□ -1.79
APL4	YPR029C	HXT6	P39003	570 aa	Known RBP	3.88	□□□□□ -1.79
APL4	YPR029C	HXT7	P39004	570 aa		3.88	□□□□□ -1.79
APL4	YPR029C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	3.88	□□□□□ -1.79	not detected
APL4	YPR029C	PUS4	P48567	403 aa	Known RBP	3.88	□□□□□ -1.79
APL4	YPR029C	TOM22	P49334	152 aa		3.88	□□□□□ -1.79
APL4	YPR029C	DSD1	P53095	428 aa		3.88	□□□□□ -1.79
APL4	YPR029C	RRT6	P53117	311 aa	Predicted RBP	3.88	□□□□□ -1.79
APL4	YPR029C	PGA2	P53903	129 aa		3.88	□□□□□ -1.79
APL4	YPR029C	MUK1	Q02866	612 aa		3.88	□□□□□ -1.79
APL4	YPR029C	ECM11	Q04110	302 aa		3.88	□□□□□ -1.79
APL4	YPR029C	ECM22	Q05958	814 aa	Predicted RBP	3.88	□□□□□ -1.79
APL4	YPR029C	TFC6	Q06339	672 aa		3.88	□□□□□ -1.79
APL4	YPR029C	TCO89	Q08921	799 aa		3.88	□□□□□ -1.79
APL4	YPR029C	CTI6	Q08923	506 aa		3.88	□□□□□ -1.79
APL4	YPR029C	DIN7	Q12086	430 aa		3.88	□□□□□ -1.79
APL4	YPR029C	NBP2	Q12163	236 aa		3.88	□□□□□ -1.79
APL4	YPR029C	YBR126W-A	Q8TGU7	68 aa		3.88	□□□□□ -1.79
APL4	YPR029C	YRF1-4	O13559	1382 aa		3.88	□□□□□ -1.79
APL4	YPR029C	RPS9A	O13516	197 aa	Known RBP	3.88	□□□□□ -1.79
APL4	YPR029C	TEF1	P02994	458 aa	Known RBP	3.88	□□□□□ -1.79
APL4	YPR029C	RPS9B	P05755	195 aa	Known RBP	3.88	□□□□□ -1.79
APL4	YPR029C	TRK1	P12685	1235 aa		3.88	□□□□□ -1.79
APL4	YPR029C	CPR2	P23285	205 aa		3.88	□□□□□ -1.79
APL4	YPR029C	UTR2	P32623	467 aa		3.88	□□□□□ -1.79
APL4	YPR029C	OAF3	P36023	863 aa		3.88	□□□□□ -1.79
APL4	YPR029C	IFA38	P38286	347 aa		3.88	□□□□□ -1.79
APL4	YPR029C	MUP3	P38734	546 aa		3.88	□□□□□ -1.79
APL4	YPR029C	LIN1	P38852	340 aa	Predicted RBP	3.88	□□□□□ -1.79
APL4	YPR029C	YHR202W	P38887	602 aa		3.88	□□□□□ -1.79
APL4	YPR029C	TAD1	P53065	400 aa		3.88	□□□□□ -1.79
APL4	YPR029C	DAM1	P53267	343 aa		3.88	□□□□□ -1.79
APL4	YPR029C	DCP2	P53550	970 aa	Known RBP	3.88	□□□□□ -1.79
APL4	YPR029C	RPM2	Q02773	1202 aa		3.88	□□□□□ -1.79
APL4	YPR029C	ATP25	Q03153	612 aa		3.88	□□□□□ -1.79
APL4	YPR029C	EFR3	Q03653	782 aa	Known RBP	3.88	□□□□□ -1.79
APL4	YPR029C	VPS20	Q04272	221 aa		3.88	□□□□□ -1.79
APL4	YPR029C	MRPL1	Q04599	285 aa		3.88	□□□□□ -1.79
APL4	YPR029C	MSC3	Q05812	728 aa		3.88	□□□□□ -1.79
APL4	YPR029C	RCN2	Q12044	265 aa		3.88	□□□□□ -1.79
APL4	YPR029C	PSF3	Q12146	194 aa		3.88	□□□□□ -1.79
APL4	YPR029C	GET3	Q12154	354 aa	Known RBP	3.88	□□□□□ -1.79
APL4	YPR029C	RPN5	Q12250	445 aa	Known RBP	3.88	□□□□□ -1.79
APL4	YPR029C	FBP1	P09201	348 aa		3.87	□□□□□ -1.79
APL4	YPR029C	FAR1	P21268	830 aa		3.87	□□□□□ -1.79
APL4	YPR029C	PEP3	P27801	918 aa		3.87	□□□□□ -1.79
APL4	YPR029C	YKR015C	P36111	568 aa		3.87	□□□□□ -1.79
APL4	YPR029C	ADH5	P38113	351 aa	Known RBP	3.87	□□□□□ -1.79
APL4	YPR029C	WSS1	P38838	269 aa		3.87	□□□□□ -1.79
APL4	YPR029C	LYS9	P38999	446 aa		3.87	□□□□□ -1.79
APL4	YPR029C	YJR061W	P40355	935 aa		3.87	□□□□□ -1.79
APL4	YPR029C	VNX1	P42839	908 aa		3.87	□□□□□ -1.79
APL4	YPR029C	ABM1	P47146	123 aa		3.87	□□□□□ -1.79
APL4	YPR029C	MPP6	P53725	186 aa	Predicted RBP	3.87	□□□□□ -1.79
APL4	YPR029C	MNT4	P53745	580 aa		3.87	□□□□□ -1.79
APL4	YPR029C	KTR6	P54070	446 aa		3.87	□□□□□ -1.79
APL4	YPR029C	PEX13	P80667	386 aa		3.87	□□□□□ -1.79
APL4	YPR029C	NHX1	Q04121	633 aa		3.87	□□□□□ -1.79
APL4	YPR029C	ERV41	Q04651	352 aa		3.87	□□□□□ -1.79
APL4	YPR029C	MMR1	Q06324	491 aa		3.87	□□□□□ -1.79
APL4	YPR029C	YPL066W	Q12194	479 aa		3.87	□□□□□ -1.79
APL4	YPR029C	LDB17	Q12342	491 aa		3.87	□□□□□ -1.79
APL4	YPR029C	LAG2	Q92325	660 aa		3.87	□□□□□ -1.79
APL4	YPR029C	RPL6B	P05739	176 aa	Known RBP	3.87	□□□□□ -1.79
APL4	YPR029C	GPA1	P08539	472 aa		3.87	□□□□□ -1.79
APL4	YPR029C	PRB1	P09232	635 aa		3.87	□□□□□ -1.79
APL4	YPR029C	EST1	P17214	699 aa	Predicted RBP	3.87	□□□□□ -1.79
APL4	YPR029C	CKA2	P19454	339 aa		3.87	□□□□□ -1.79
APL4	YPR029C	MSB1	P21339	1137 aa	Known RBP	3.87	□□□□□ -1.79
APL4	YPR029C	OSM1	P21375	501 aa	Known RBP	3.87	□□□□□ -1.79
APL4	YPR029C	SEC15	P22224	910 aa		3.87	□□□□□ -1.79
APL4	YPR029C	VAC17	P25591	423 aa		3.87	□□□□□ -1.79
APL4	YPR029C	YCR051W	P25631	222 aa		3.87	□□□□□ -1.79
APL4	YPR029C	SUA5	P32579	426 aa		3.87	□□□□□ -1.79
APL4	YPR029C	DCW1	P36091	449 aa		3.87	□□□□□ -1.79
APL4	YPR029C	RGD1	P38339	666 aa		3.87	□□□□□ -1.79
APL4	YPR029C	RPN10	P38886	268 aa	Known RBP	3.87	□□□□□ -1.79
APL4	YPR029C	MRX6	P48564	524 aa		3.87	□□□□□ -1.79
APL4	YPR029C	TAF4	P50105	388 aa		3.87	□□□□□ -1.79
APL4	YPR029C	CUE3	P53137	624 aa	Known RBP	3.87	□□□□□ -1.79
APL4	YPR029C	YGR067C	P53243	804 aa		3.87	□□□□□ -1.79
APL4	YPR029C	YGR283C	P53336	341 aa	Predicted RBP	3.87	□□□□□ -1.79
APL4	YPR029C	GPD1	Q00055	391 aa	Known RBP	3.87	□□□□□ -1.79
APL4	YPR029C	RPL6A	Q02326	176 aa	Known RBP	3.87	□□□□□ -1.79
APL4	YPR029C	MED4	Q12343	284 aa		3.87	□□□□□ -1.79
APL4	YPR029C	RPL19A	P0CX82	189 aa	Known RBP	3.86	□□□□□ -1.79
APL4	YPR029C	RPL19B	P0CX83	189 aa	Predicted RBP	3.86	□□□□□ -1.79
APL4	YPR029C	GCD2	P12754	651 aa	Predicted RBP	3.86	□□□□□ -1.79
APL4	YPR029C	UNG1	P12887	359 aa		3.86	□□□□□ -1.79
APL4	YPR029C	BET2	P20133	325 aa		3.86	□□□□□ -1.79
APL4	YPR029C	AMS1	P22855	1083 aa		3.86	□□□□□ -1.79
APL4	YPR029C	YCR016W	P25617	290 aa	Known RBP	3.86	□□□□□ -1.79
APL4	YPR029C	URA7	P28274	579 aa	Known RBP	3.86	□□□□□ -1.79
APL4	YPR029C	CDC12	P32468	407 aa	Known RBP	3.86	□□□□□ -1.79
APL4	YPR029C	PGM2	P37012	569 aa	Known RBP	3.86	□□□□□ -1.79
APL4	YPR029C	UGA2	P38067	497 aa		3.86	□□□□□ -1.79
APL4	YPR029C	SHU2	P38957	223 aa		3.86	□□□□□ -1.79
APL4	YPR029C	FLC2	P39719	783 aa		3.86	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms