RNA–Protein interactions for RNA: YPL248C

GAL4, Transcript of DNA-binding transcription factor required for activating GAL genes, yeast

Gene GAL4, Length 2,646 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GAL4	YPL248C	CBK1	P53894	756 aa		4.86	□□□□□ -1.63
GAL4	YPL248C	ESBP6	P53918	673 aa		4.86	□□□□□ -1.63
GAL4	YPL248C	VPS9	P54787	451 aa		4.86	□□□□□ -1.63
GAL4	YPL248C	TAF12	Q03761	539 aa		4.86	□□□□□ -1.63
GAL4	YPL248C	PDH1	Q12428	516 aa	Known RBP	4.86	□□□□□ -1.63
GAL4	YPL248C	YKL068W-A	Q3E826	78 aa		4.86	□□□□□ -1.63
GAL4	YPL248C	RPC31	P17890	251 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	SCJ1	P25303	377 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	MLS1	P30952	554 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	RAD54	P32863	898 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	YBR225W	P38321	900 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	DUN1	P39009	513 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	MSS2	P40990	351 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	ALT1	P52893	592 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	RSN1	Q03516	953 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	YAP6	Q03935	383 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	UTP5	Q04177	643 aa	Known RBP	4.85	□□□□□ -1.63
GAL4	YPL248C	RBS1	Q05672	457 aa	Known RBP	4.85	□□□□□ -1.63
GAL4	YPL248C	YCS4	Q06156	1176 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	SPH1	Q06160	661 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	YFT2	Q06676	274 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	YCG1	Q06680	1035 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	SNA4	Q07549	140 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	MMP1	Q12372	583 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	MET17	P06106	444 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	STE50	P25344	346 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	BMT2	P38278	337 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	BSD2	P38356	321 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	SAK1	P38990	1142 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	STB4	P50104	949 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	SAM37	P50110	327 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	PAN2	P53010	1115 aa	Predicted RBP	4.85	□□□□□ -1.63
GAL4	YPL248C	SGF73	P53165	657 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	IPI3	P53877	555 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	OAZ1	Q02803	292 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	ABZ2	Q03266	374 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	TRS120	Q04183	1289 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	GIM5	Q04493	163 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	GRS2	Q06817	618 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	SKM1	Q12469	655 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	CMC2	Q3E7A4	109 aa		4.85	□□□□□ -1.63
GAL4	YPL248C	KIN2	P13186	1147 aa	Known RBP	4.84	□□□□□ -1.63
GAL4	YPL248C	ESS1	P22696	170 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	GRR1	P24814	1151 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	EFT1	P32324	842 aa	Known RBP	4.84	□□□□□ -1.63
GAL4	YPL248C	MEI5	P32489	222 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	SRP101	P32916	621 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	FAA3	P39002	694 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	YEL068C	P39977	110 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	COQ6	P53318	479 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	WAR1	Q03631	944 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	SRC1	Q03707	834 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	CAB1	Q04430	367 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	YEH2	Q07950	538 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	HAL9	Q12180	1030 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	IMG2	P25642	146 aa	Predicted RBP	4.84	□□□□□ -1.63
GAL4	YPL248C	ERG1	P32476	496 aa	Known RBP	4.84	□□□□□ -1.63
GAL4	YPL248C	AFG2	P32794	780 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	POP7	P38291	140 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	AXL2	P38928	823 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	YDR089W	P38966	869 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	GDI1	P39958	451 aa	Known RBP	4.84	□□□□□ -1.63
GAL4	YPL248C	CEP3	P40969	608 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	QRI1	P43123	477 aa	Known RBP	4.84	□□□□□ -1.63
GAL4	YPL248C	MDV1	P47025	714 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	YDL183C	P48569	320 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	TIM21	P53220	239 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	GOR1	P53839	350 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	HOS3	Q02959	697 aa	Known RBP	4.84	□□□□□ -1.63
GAL4	YPL248C	SRL4	Q03085	281 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	PLP1	Q04004	230 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	MFB1	Q04922	465 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	TFC6	Q06339	672 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	VAM6	Q07468	1049 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	YRR1	Q12172	810 aa		4.84	□□□□□ -1.63
GAL4	YPL248C	PSK1	P31374	1356 aa		4.84	□□□□□ -1.64
GAL4	YPL248C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
GAL4	YPL248C	CKA1	P15790	372 aa		4.83	□□□□□ -1.64
GAL4	YPL248C	PRP2	P20095	876 aa	Predicted RBP	4.83	□□□□□ -1.64
GAL4	YPL248C	LRG1	P35688	1017 aa		4.83	□□□□□ -1.64
GAL4	YPL248C	YHR182W	P38870	785 aa		4.83	□□□□□ -1.64
GAL4	YPL248C	FRT2	P39734	528 aa		4.83	□□□□□ -1.64
GAL4	YPL248C	PCL6	P40038	420 aa		4.83	□□□□□ -1.64
GAL4	YPL248C	MSC3	Q05812	728 aa		4.83	□□□□□ -1.64
GAL4	YPL248C	THI3	Q07471	609 aa		4.83	□□□□□ -1.64
GAL4	YPL248C	NGL1	Q08213	363 aa	Known RBP	4.83	□□□□□ -1.64
GAL4	YPL248C	LDB17	Q12342	491 aa		4.83	□□□□□ -1.64
GAL4	YPL248C	SEM1	O94742	89 aa		4.83	□□□□□ -1.64
GAL4	YPL248C	TCP1	P12612	559 aa	Known RBP	4.83	□□□□□ -1.64
GAL4	YPL248C	SEC18	P18759	758 aa	Known RBP	4.83	□□□□□ -1.64
GAL4	YPL248C	MRM1	P25270	412 aa		4.83	□□□□□ -1.64
GAL4	YPL248C	OCT1	P35999	772 aa		4.83	□□□□□ -1.64
GAL4	YPL248C	NCL1	P38205	684 aa	Known RBP	4.83	□□□□□ -1.64
GAL4	YPL248C	SOH1	P38633	127 aa		4.83	□□□□□ -1.64
GAL4	YPL248C	SIP5	P40210	489 aa	Known RBP	4.83	□□□□□ -1.64
GAL4	YPL248C	PCI8	P40512	444 aa		4.83	□□□□□ -1.64
GAL4	YPL248C	STB2	P46679	850 aa		4.83	□□□□□ -1.64
GAL4	YPL248C	DSD1	P53095	428 aa		4.83	□□□□□ -1.64
GAL4	YPL248C	SHE9	Q04172	456 aa		4.83	□□□□□ -1.64
GAL4	YPL248C	MGR3	Q04472	501 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms