RNA–Protein interactions for RNA: YOR287C

RRP36, Transcript of Component of 90S preribosomes, yeast

Gene RRP36, Length 903 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP36	YOR287C	TFC4	P33339	1025 aa		4.25	□□□□□ -1.73
RRP36	YOR287C	DID4	P36108	232 aa		4.25	□□□□□ -1.73
RRP36	YOR287C	GRX7	P38068	203 aa		4.25	□□□□□ -1.73
RRP36	YOR287C	YPT10	P38146	199 aa		4.25	□□□□□ -1.73
RRP36	YOR287C	SMC3	P47037	1230 aa		4.25	□□□□□ -1.73
RRP36	YOR287C	YDL183C	P48569	320 aa		4.25	□□□□□ -1.73
RRP36	YOR287C	SAP4	P53036	818 aa		4.25	□□□□□ -1.73
RRP36	YOR287C	PEX14	P53112	341 aa		4.25	□□□□□ -1.73
RRP36	YOR287C	SCW4	P53334	386 aa	Known RBP	4.25	□□□□□ -1.73
RRP36	YOR287C	COG6	P53959	839 aa		4.25	□□□□□ -1.73
RRP36	YOR287C	BUD21	Q08492	214 aa	Predicted RBP	4.25	□□□□□ -1.73
RRP36	YOR287C	YLR111W	Q12528	110 aa		4.25	□□□□□ -1.73
RRP36	YOR287C	RMP1	Q12530	201 aa		4.25	□□□□□ -1.73
RRP36	YOR287C	SRB8	P25648	1427 aa		4.24	□□□□□ -1.73
RRP36	YOR287C	TRM732	Q03496	1420 aa		4.24	□□□□□ -1.73
RRP36	YOR287C	YLR419W	Q06698	1435 aa	Known RBP	4.24	□□□□□ -1.73
RRP36	YOR287C	SRP54	P20424	541 aa	Known RBP	4.24	□□□□□ -1.73
RRP36	YOR287C	AEP2	P22136	580 aa		4.24	□□□□□ -1.73
RRP36	YOR287C	YHR033W	P38690	423 aa		4.24	□□□□□ -1.73
RRP36	YOR287C	YEL025C	P39991	1188 aa		4.24	□□□□□ -1.73
RRP36	YOR287C	OPT1	P40897	799 aa		4.24	□□□□□ -1.73
RRP36	YOR287C	SNO3	P43544	222 aa		4.24	□□□□□ -1.73
RRP36	YOR287C	DUG1	P43616	481 aa	Known RBP	4.24	□□□□□ -1.73
RRP36	YOR287C	TAN1	P53072	289 aa	Predicted RBP	4.24	□□□□□ -1.73
RRP36	YOR287C	NSE5	Q03718	556 aa		4.24	□□□□□ -1.73
RRP36	YOR287C	ARR3	Q06598	404 aa		4.24	□□□□□ -1.73
RRP36	YOR287C	YCG1	Q06680	1035 aa		4.24	□□□□□ -1.73
RRP36	YOR287C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
RRP36	YOR287C	PCL8	Q08966	492 aa		4.24	□□□□□ -1.73
RRP36	YOR287C	HIF1	Q12373	385 aa		4.24	□□□□□ -1.73
RRP36	YOR287C	CDC26	P14724	124 aa		4.23	□□□□□ -1.73
RRP36	YOR287C	URE2	P23202	354 aa	Known RBP	4.23	□□□□□ -1.73
RRP36	YOR287C	DHR2	P36009	735 aa	Predicted RBP	4.23	□□□□□ -1.73
RRP36	YOR287C	OAF3	P36023	863 aa		4.23	□□□□□ -1.73
RRP36	YOR287C	VID28	P40547	921 aa		4.23	□□□□□ -1.73
RRP36	YOR287C	BSP1	Q06604	576 aa		4.23	□□□□□ -1.73
RRP36	YOR287C	YPR027C	Q12079	277 aa		4.23	□□□□□ -1.73
RRP36	YOR287C	YMR084W	A2P2R3	262 aa		4.22	□□□□□ -1.73
RRP36	YOR287C	YMR085W	P0CF18	432 aa		4.22	□□□□□ -1.73
RRP36	YOR287C	YAP1	P19880	650 aa	Known RBP	4.22	□□□□□ -1.73
RRP36	YOR287C	GSY2	P27472	705 aa		4.22	□□□□□ -1.73
RRP36	YOR287C	PLC1	P32383	869 aa		4.22	□□□□□ -1.73
RRP36	YOR287C	APD1	P38281	316 aa		4.22	□□□□□ -1.73
RRP36	YOR287C	GPP2	P40106	250 aa	Known RBP	4.22	□□□□□ -1.73
RRP36	YOR287C	LRO1	P40345	661 aa		4.22	□□□□□ -1.73
RRP36	YOR287C	WAR1	Q03631	944 aa		4.22	□□□□□ -1.73
RRP36	YOR287C	HFI1	Q12060	488 aa		4.22	□□□□□ -1.73
RRP36	YOR287C	RDL1	Q12305	139 aa	Known RBP	4.22	□□□□□ -1.73
RRP36	YOR287C	CFT1	Q06632	1357 aa	Known RBP	4.22	□□□□□ -1.73
RRP36	YOR287C	BUD4	P47136	1447 aa		4.21	□□□□□ -1.73
RRP36	YOR287C	PET111	P08468	800 aa		4.21	□□□□□ -1.74
RRP36	YOR287C	CAP1	P28495	268 aa	Known RBP	4.21	□□□□□ -1.74
RRP36	YOR287C	SER1	P33330	395 aa	Known RBP	4.21	□□□□□ -1.74
RRP36	YOR287C	RAD26	P40352	1085 aa		4.21	□□□□□ -1.74
RRP36	YOR287C	MNT3	P40549	630 aa		4.21	□□□□□ -1.74
RRP36	YOR287C	NIT2	P47016	307 aa		4.21	□□□□□ -1.74
RRP36	YOR287C	SPC105	P53148	917 aa		4.21	□□□□□ -1.74
RRP36	YOR287C	IDP3	P53982	420 aa	Known RBP	4.21	□□□□□ -1.74
RRP36	YOR287C	SND1	Q04007	877 aa		4.21	□□□□□ -1.74
RRP36	YOR287C	TGS1	Q12052	315 aa		4.21	□□□□□ -1.74
RRP36	YOR287C	CRC1	Q12289	327 aa		4.21	□□□□□ -1.74
RRP36	YOR287C	KAR1	P11927	433 aa		4.2	□□□□□ -1.74
RRP36	YOR287C	RGT1	P32862	1170 aa		4.2	□□□□□ -1.74
RRP36	YOR287C	RPS0A	P32905	252 aa	Known RBP	4.2	□□□□□ -1.74
RRP36	YOR287C	LTV1	P34078	463 aa		4.2	□□□□□ -1.74
RRP36	YOR287C	LOT5	P34234	306 aa		4.2	□□□□□ -1.74
RRP36	YOR287C	ASK1	P35734	292 aa		4.2	□□□□□ -1.74
RRP36	YOR287C	CCL1	P37366	393 aa		4.2	□□□□□ -1.74
RRP36	YOR287C	SAE2	P46946	345 aa		4.2	□□□□□ -1.74
RRP36	YOR287C	RNR4	P49723	345 aa	Known RBP	4.2	□□□□□ -1.74
RRP36	YOR287C	NNF2	P53253	936 aa		4.2	□□□□□ -1.74
RRP36	YOR287C	SKY1	Q03656	742 aa		4.2	□□□□□ -1.74
RRP36	YOR287C	USA1	Q03714	838 aa		4.2	□□□□□ -1.74
RRP36	YOR287C	GFD1	Q04839	188 aa	Known RBP	4.2	□□□□□ -1.74
RRP36	YOR287C	ETT1	Q08421	412 aa	Known RBP	4.2	□□□□□ -1.74
RRP36	YOR287C	AIM41	Q12032	185 aa		4.2	□□□□□ -1.74
RRP36	YOR287C	NUP170	P38181	1502 aa		4.2	□□□□□ -1.74
RRP36	YOR287C	MMS1	Q06211	1407 aa		4.2	□□□□□ -1.74
RRP36	YOR287C	EDE1	P34216	1381 aa		4.19	□□□□□ -1.74
RRP36	YOR287C	HMG2	P12684	1045 aa		4.19	□□□□□ -1.74
RRP36	YOR287C	JHD1	P40034	492 aa		4.19	□□□□□ -1.74
RRP36	YOR287C	PCI8	P40512	444 aa		4.19	□□□□□ -1.74
RRP36	YOR287C	TDA10	P42938	290 aa		4.19	□□□□□ -1.74
RRP36	YOR287C	PEX8	P53248	589 aa		4.19	□□□□□ -1.74
RRP36	YOR287C	PRP3	Q03338	469 aa	Predicted RBP	4.19	□□□□□ -1.74
RRP36	YOR287C	YOL057W	Q08225	711 aa		4.19	□□□□□ -1.74
RRP36	YOR287C	HER1	Q12276	1246 aa		4.19	□□□□□ -1.74
RRP36	YOR287C	APM4	Q99186	491 aa		4.19	□□□□□ -1.74
RRP36	YOR287C	YPK9	Q12697	1472 aa		4.18	□□□□□ -1.74
RRP36	YOR287C	COX11	P19516	300 aa	Known RBP	4.18	□□□□□ -1.74
RRP36	YOR287C	MF(ALPHA)2	P32435	120 aa		4.18	□□□□□ -1.74
RRP36	YOR287C	SWI3	P32591	825 aa		4.18	□□□□□ -1.74
RRP36	YOR287C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
RRP36	YOR287C	PXL1	P36166	706 aa		4.18	□□□□□ -1.74
RRP36	YOR287C	SLD3	P53135	668 aa		4.18	□□□□□ -1.74
RRP36	YOR287C	TLG1	Q03322	224 aa		4.18	□□□□□ -1.74
RRP36	YOR287C	ECM38	Q05902	660 aa	Predicted RBP	4.18	□□□□□ -1.74
RRP36	YOR287C	TMA7	Q3E764	64 aa	Known RBP	4.18	□□□□□ -1.74
RRP36	YOR287C	ATP12	P22135	325 aa		4.17	□□□□□ -1.74
RRP36	YOR287C	YJU2	P28320	278 aa	Predicted RBP	4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms