RNA–Protein interactions for RNA: YOR004W

UTP23, Transcript of Component of the small subunit processome, yeast

Gene UTP23, Length 765 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UTP23	YOR004W	KIN3	P22209	435 aa		4.25	□□□□□ -1.73
UTP23	YOR004W	RAD5	P32849	1169 aa	Predicted RBP	4.25	□□□□□ -1.73
UTP23	YOR004W	MTC2	P34246	357 aa		4.25	□□□□□ -1.73
UTP23	YOR004W	TDP1	P38319	544 aa		4.25	□□□□□ -1.73
UTP23	YOR004W	CBR1	P38626	284 aa	Known RBP	4.25	□□□□□ -1.73
UTP23	YOR004W	NCS2	P53923	493 aa	Predicted RBP	4.25	□□□□□ -1.73
UTP23	YOR004W	ADE16	P54113	591 aa	Known RBP	4.25	□□□□□ -1.73
UTP23	YOR004W	POB3	Q04636	552 aa	Known RBP	4.25	□□□□□ -1.73
UTP23	YOR004W	YLR287C	Q05881	355 aa		4.25	□□□□□ -1.73
UTP23	YOR004W	DCS2	Q12123	353 aa		4.25	□□□□□ -1.73
UTP23	YOR004W	TAH18	Q12181	623 aa		4.25	□□□□□ -1.73
UTP23	YOR004W	RMP1	Q12530	201 aa		4.25	□□□□□ -1.73
UTP23	YOR004W	LAM4	P38800	1345 aa		4.24	□□□□□ -1.73
UTP23	YOR004W	CDC37	P06101	506 aa	Known RBP	4.24	□□□□□ -1.73
UTP23	YOR004W	ERR1	P0CX10	437 aa		4.24	□□□□□ -1.73
UTP23	YOR004W	ERR2	P0CX11	437 aa		4.24	□□□□□ -1.73
UTP23	YOR004W	SEC65	P29478	273 aa		4.24	□□□□□ -1.73
UTP23	YOR004W	HXT1	P32465	570 aa		4.24	□□□□□ -1.73
UTP23	YOR004W	LOS1	P33418	1100 aa	Predicted RBP	4.24	□□□□□ -1.73
UTP23	YOR004W	RPN10	P38886	268 aa	Known RBP	4.24	□□□□□ -1.73
UTP23	YOR004W	SMF1	P38925	575 aa		4.24	□□□□□ -1.73
UTP23	YOR004W	REV7	P38927	245 aa		4.24	□□□□□ -1.73
UTP23	YOR004W	SAP1	P39955	897 aa	Known RBP	4.24	□□□□□ -1.73
UTP23	YOR004W	MRX1	P40050	688 aa		4.24	□□□□□ -1.73
UTP23	YOR004W	SHQ1	P40486	507 aa	Predicted RBP	4.24	□□□□□ -1.73
UTP23	YOR004W	EPL1	P43572	832 aa		4.24	□□□□□ -1.73
UTP23	YOR004W	VPS73	P53142	486 aa	Known RBP	4.24	□□□□□ -1.73
UTP23	YOR004W	NNF2	P53253	936 aa		4.24	□□□□□ -1.73
UTP23	YOR004W	YAP1802	P53309	568 aa		4.24	□□□□□ -1.73
UTP23	YOR004W	NGL3	Q03210	505 aa		4.24	□□□□□ -1.73
UTP23	YOR004W	VPS64	Q03944	604 aa		4.24	□□□□□ -1.73
UTP23	YOR004W	SFH1	Q06168	426 aa		4.24	□□□□□ -1.73
UTP23	YOR004W	AFT2	Q08957	416 aa		4.24	□□□□□ -1.73
UTP23	YOR004W	GET3	Q12154	354 aa	Known RBP	4.24	□□□□□ -1.73
UTP23	YOR004W	SNU66	Q12420	587 aa	Predicted RBP	4.24	□□□□□ -1.73
UTP23	YOR004W	KAR3	P17119	729 aa		4.23	□□□□□ -1.73
UTP23	YOR004W	HCA4	P20448	770 aa	Known RBP	4.23	□□□□□ -1.73
UTP23	YOR004W	RAD51	P25454	400 aa		4.23	□□□□□ -1.73
UTP23	YOR004W	CDC60	P26637	1090 aa	Known RBP	4.23	□□□□□ -1.73
UTP23	YOR004W	HIR1	P32479	840 aa		4.23	□□□□□ -1.73
UTP23	YOR004W	YET1	P35723	206 aa		4.23	□□□□□ -1.73
UTP23	YOR004W	MCD4	P36051	919 aa		4.23	□□□□□ -1.73
UTP23	YOR004W	HEL1	P36113	551 aa		4.23	□□□□□ -1.73
UTP23	YOR004W	OLA1	P38219	394 aa	Known RBP	4.23	□□□□□ -1.73
UTP23	YOR004W	SPP381	P38282	291 aa	Predicted RBP	4.23	□□□□□ -1.73
UTP23	YOR004W	CCT3	P39077	534 aa	Known RBP	4.23	□□□□□ -1.73
UTP23	YOR004W	VFA1	P40080	203 aa		4.23	□□□□□ -1.73
UTP23	YOR004W	YFL052W	P43551	465 aa		4.23	□□□□□ -1.73
UTP23	YOR004W	YJR039W	P47107	1121 aa		4.23	□□□□□ -1.73
UTP23	YOR004W	MAL11	P53048	616 aa		4.23	□□□□□ -1.73
UTP23	YOR004W	PXR1	P53335	271 aa	Predicted RBP	4.23	□□□□□ -1.73
UTP23	YOR004W	RTC4	P53850	401 aa		4.23	□□□□□ -1.73
UTP23	YOR004W	ORC4	P54791	529 aa		4.23	□□□□□ -1.73
UTP23	YOR004W	DOS2	P54858	310 aa		4.23	□□□□□ -1.73
UTP23	YOR004W	LGE1	Q02796	332 aa	Known RBP	4.23	□□□□□ -1.73
UTP23	YOR004W	MMR1	Q06324	491 aa		4.23	□□□□□ -1.73
UTP23	YOR004W	OPY2	Q06810	360 aa		4.23	□□□□□ -1.73
UTP23	YOR004W	CMS1	Q07897	291 aa	Known RBP	4.23	□□□□□ -1.73
UTP23	YOR004W	ABP140	Q08641	628 aa	Known RBP	4.23	□□□□□ -1.73
UTP23	YOR004W	RRP6	Q12149	733 aa	Known RBP	4.23	□□□□□ -1.73
UTP23	YOR004W	RIO1	Q12196	484 aa	Known RBP	4.23	□□□□□ -1.73
UTP23	YOR004W	SUT2	Q12286	268 aa		4.23	□□□□□ -1.73
UTP23	YOR004W	CEX1	Q12453	761 aa		4.23	□□□□□ -1.73
UTP23	YOR004W	NBL1	Q3E7Y6	73 aa		4.23	□□□□□ -1.73
UTP23	YOR004W	FAS2	P19097	1887 aa	Known RBP	4.23	□□□□□ -1.73
UTP23	YOR004W	YMR085W	P0CF18	432 aa		4.22	□□□□□ -1.73
UTP23	YOR004W	KRS1	P15180	591 aa	Known RBP	4.22	□□□□□ -1.73
UTP23	YOR004W	SEC18	P18759	758 aa	Known RBP	4.22	□□□□□ -1.73
UTP23	YOR004W	OSM1	P21375	501 aa	Known RBP	4.22	□□□□□ -1.73
UTP23	YOR004W	RAD57	P25301	460 aa		4.22	□□□□□ -1.73
UTP23	YOR004W	SWI4	P25302	1093 aa	Known RBP	4.22	□□□□□ -1.73
UTP23	YOR004W	PDB1	P32473	366 aa	Known RBP	4.22	□□□□□ -1.73
UTP23	YOR004W	UBC6	P33296	250 aa	Predicted RBP	4.22	□□□□□ -1.73
UTP23	YOR004W	YKR018C	P36114	725 aa		4.22	□□□□□ -1.73
UTP23	YOR004W	MIP6	P38760	659 aa	Known RBP	4.22	□□□□□ -1.73
UTP23	YOR004W	TAH11	P47112	604 aa		4.22	□□□□□ -1.73
UTP23	YOR004W	BNA2	P47125	453 aa		4.22	□□□□□ -1.73
UTP23	YOR004W	SGM1	P47166	707 aa		4.22	□□□□□ -1.73
UTP23	YOR004W	YGR237C	P50089	785 aa		4.22	□□□□□ -1.73
UTP23	YOR004W	SEC5	P89102	971 aa		4.22	□□□□□ -1.73
UTP23	YOR004W	SPO19	Q03029	223 aa		4.22	□□□□□ -1.73
UTP23	YOR004W	RPN4	Q03465	531 aa		4.22	□□□□□ -1.73
UTP23	YOR004W	EBS1	Q03466	884 aa	Known RBP	4.22	□□□□□ -1.73
UTP23	YOR004W	CTK1	Q03957	528 aa	Known RBP	4.22	□□□□□ -1.73
UTP23	YOR004W	VTI1	Q04338	217 aa		4.22	□□□□□ -1.73
UTP23	YOR004W	TAF10	Q12030	206 aa		4.22	□□□□□ -1.73
UTP23	YOR004W	DAS2	Q12084	232 aa		4.22	□□□□□ -1.73
UTP23	YOR004W	YLR149C	Q99296	730 aa		4.22	□□□□□ -1.73
UTP23	YOR004W	ADR1	P07248	1323 aa		4.21	□□□□□ -1.73
UTP23	YOR004W	JIP3	O13555	125 aa		4.21	□□□□□ -1.74
UTP23	YOR004W	HIS4	P00815	799 aa	Known RBP	4.21	□□□□□ -1.74
UTP23	YOR004W	SIR3	P06701	978 aa		4.21	□□□□□ -1.74
UTP23	YOR004W	ALG1	P16661	449 aa		4.21	□□□□□ -1.74
UTP23	YOR004W	SPO12	P17123	173 aa		4.21	□□□□□ -1.74
UTP23	YOR004W	ADE2	P21264	571 aa	Known RBP	4.21	□□□□□ -1.74
UTP23	YOR004W	DMC1	P25453	334 aa		4.21	□□□□□ -1.74
UTP23	YOR004W	PRP45	P28004	379 aa	Predicted RBP	4.21	□□□□□ -1.74
UTP23	YOR004W	NIP1	P32497	812 aa	Known RBP	4.21	□□□□□ -1.74
UTP23	YOR004W	GCG1	P32656	232 aa	Known RBP	4.21	□□□□□ -1.74
UTP23	YOR004W	YKL091C	P33324	310 aa	Known RBP	4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms