RNA–Protein interactions for RNA: YNR001C

CIT1, Transcript of Citrate synthase, yeast

Gene CIT1, Length 1,440 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CIT1	YNR001C	SFB2	P53953	876 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	ARA2	Q04212	335 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	LSP1	Q12230	341 aa	Known RBP	4.12	□□□□□ -1.75
CIT1	YNR001C	Q0142	Q9ZZW4	58 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	SEM1	O94742	89 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	FUM1	P08417	488 aa	Known RBP	4.12	□□□□□ -1.75
CIT1	YNR001C	CDC16	P09798	840 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	MTF2	P10849	440 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	POL3	P15436	1097 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	CBP3	P21560	335 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	UBC1	P21734	215 aa	Known RBP	4.12	□□□□□ -1.75
CIT1	YNR001C	MCM3	P24279	971 aa	Known RBP	4.12	□□□□□ -1.75
CIT1	YNR001C	CNS1	P33313	385 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	TEF4	P36008	412 aa	Known RBP	4.12	□□□□□ -1.75
CIT1	YNR001C	RKM3	P38222	552 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	AXL2	P38928	823 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	DUN1	P39009	513 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	SWD1	P39706	426 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	YER010C	P40011	234 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	PUG1	P40100	303 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	RIC1	P40395	1056 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	DPH1	P40487	425 aa	Known RBP	4.12	□□□□□ -1.75
CIT1	YNR001C	IRC6	P43615	237 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	YGR012W	P53206	393 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	YGR016W	P53209	190 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	YMR210W	Q03649	449 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	NSE5	Q03718	556 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	TAF11	Q04226	346 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	IRC3	Q06683	689 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	CSR1	Q06705	408 aa	Known RBP	4.12	□□□□□ -1.75
CIT1	YNR001C	WHI4	Q07655	649 aa	Known RBP	4.12	□□□□□ -1.75
CIT1	YNR001C	YOR022C	Q12204	715 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	SFI1	Q12369	946 aa		4.12	□□□□□ -1.75
CIT1	YNR001C	HAP1	P0CE41	1502 aa		4.11	□□□□□ -1.75
CIT1	YNR001C	SPE1	P08432	466 aa		4.11	□□□□□ -1.75
CIT1	YNR001C	SWI6	P09959	803 aa		4.11	□□□□□ -1.75
CIT1	YNR001C	YEL076C-A	P0CX16	216 aa		4.11	□□□□□ -1.75
CIT1	YNR001C	YLR464W	P0CX17	216 aa		4.11	□□□□□ -1.75
CIT1	YNR001C	ADH4	P10127	382 aa		4.11	□□□□□ -1.75
CIT1	YNR001C	RED1	P14291	827 aa		4.11	□□□□□ -1.75
CIT1	YNR001C	GUK1	P15454	187 aa	Known RBP	4.11	□□□□□ -1.75
CIT1	YNR001C	KRR1	P25586	316 aa	Predicted RBP	4.11	□□□□□ -1.75
CIT1	YNR001C	BRF1	P29056	596 aa		4.11	□□□□□ -1.75
CIT1	YNR001C	TYE7	P33122	291 aa	Predicted RBP	4.11	□□□□□ -1.75
CIT1	YNR001C	SSP120	P39931	234 aa	Known RBP	4.11	□□□□□ -1.75
CIT1	YNR001C	YEL076C	P39971	216 aa		4.11	□□□□□ -1.75
CIT1	YNR001C	JEM1	P40358	645 aa		4.11	□□□□□ -1.75
CIT1	YNR001C	IRC5	P43610	853 aa		4.11	□□□□□ -1.75
CIT1	YNR001C	CPR6	P53691	371 aa	Known RBP	4.11	□□□□□ -1.75
CIT1	YNR001C	NOP15	P53927	220 aa	Predicted RBP	4.11	□□□□□ -1.75
CIT1	YNR001C	RPT6	Q01939	405 aa	Known RBP	4.11	□□□□□ -1.75
CIT1	YNR001C	MTD1	Q02046	320 aa	Known RBP	4.11	□□□□□ -1.75
CIT1	YNR001C	ZRT2	Q12436	422 aa		4.11	□□□□□ -1.75
CIT1	YNR001C	VTH1	P40438	1549 aa		4.1	□□□□□ -1.75
CIT1	YNR001C	VTH2	P40890	1549 aa		4.1	□□□□□ -1.75
CIT1	YNR001C	EDE1	P34216	1381 aa		4.1	□□□□□ -1.75
CIT1	YNR001C	CFT1	Q06632	1357 aa	Known RBP	4.1	□□□□□ -1.75
CIT1	YNR001C	MET8	P15807	274 aa		4.1	□□□□□ -1.75
CIT1	YNR001C	NCP1	P16603	691 aa	Known RBP	4.1	□□□□□ -1.75
CIT1	YNR001C	HXT4	P32467	576 aa		4.1	□□□□□ -1.75
CIT1	YNR001C	NPR3	P38742	1146 aa		4.1	□□□□□ -1.75
CIT1	YNR001C	SSZ1	P38788	538 aa	Known RBP	4.1	□□□□□ -1.75
CIT1	YNR001C	UBP7	P40453	1071 aa		4.1	□□□□□ -1.75
CIT1	YNR001C	LYS14	P40971	790 aa		4.1	□□□□□ -1.75
CIT1	YNR001C	SMC3	P47037	1230 aa		4.1	□□□□□ -1.75
CIT1	YNR001C	YJR039W	P47107	1121 aa		4.1	□□□□□ -1.75
CIT1	YNR001C	PUS4	P48567	403 aa	Known RBP	4.1	□□□□□ -1.75
CIT1	YNR001C	YAP1802	P53309	568 aa		4.1	□□□□□ -1.75
CIT1	YNR001C	DUS1	P53759	423 aa	Known RBP	4.1	□□□□□ -1.75
CIT1	YNR001C	ISA1	Q07821	250 aa	Predicted RBP	4.1	□□□□□ -1.75
CIT1	YNR001C	VHS3	Q08438	674 aa		4.1	□□□□□ -1.75
CIT1	YNR001C	TRM8	Q12009	286 aa		4.1	□□□□□ -1.75
CIT1	YNR001C	HUA2	Q12134	243 aa		4.1	□□□□□ -1.75
CIT1	YNR001C	RVB2	Q12464	471 aa	Known RBP	4.1	□□□□□ -1.75
CIT1	YNR001C	SKM1	Q12469	655 aa		4.1	□□□□□ -1.75
CIT1	YNR001C	YLR149C	Q99296	730 aa		4.1	□□□□□ -1.75
CIT1	YNR001C	TY1B-NL2	Q99337	1749 aa	Known RBP	4.09	□□□□□ -1.75
CIT1	YNR001C	ECM32	P32644	1121 aa	Known RBP	4.09	□□□□□ -1.75
CIT1	YNR001C	MTH1	P35198	433 aa		4.09	□□□□□ -1.75
CIT1	YNR001C	PRM2	P40534	656 aa		4.09	□□□□□ -1.75
CIT1	YNR001C	AXL1	P40851	1208 aa		4.09	□□□□□ -1.75
CIT1	YNR001C	BUL1	P48524	976 aa		4.09	□□□□□ -1.75
CIT1	YNR001C	NCS6	P53088	359 aa		4.09	□□□□□ -1.75
CIT1	YNR001C	BSC5	P53755	489 aa		4.09	□□□□□ -1.75
CIT1	YNR001C	ORC4	P54791	529 aa		4.09	□□□□□ -1.75
CIT1	YNR001C	TIM10	P87108	93 aa		4.09	□□□□□ -1.75
CIT1	YNR001C	YKR011C	Q02209	353 aa		4.09	□□□□□ -1.75
CIT1	YNR001C	MFB1	Q04922	465 aa		4.09	□□□□□ -1.75
CIT1	YNR001C	YLR407W	Q06070	228 aa		4.09	□□□□□ -1.75
CIT1	YNR001C	IWR1	Q07532	353 aa	Predicted RBP	4.09	□□□□□ -1.75
CIT1	YNR001C	YDL144C	Q07589	356 aa		4.09	□□□□□ -1.75
CIT1	YNR001C	NBP2	Q12163	236 aa		4.09	□□□□□ -1.75
CIT1	YNR001C	ISA2	Q12425	185 aa		4.09	□□□□□ -1.75
CIT1	YNR001C	RPS17A	P02407	136 aa	Known RBP	4.08	□□□□□ -1.76
CIT1	YNR001C	PCK1	P10963	549 aa		4.08	□□□□□ -1.76
CIT1	YNR001C	PCT1	P13259	424 aa		4.08	□□□□□ -1.76
CIT1	YNR001C	RPS17B	P14127	136 aa	Known RBP	4.08	□□□□□ -1.76
CIT1	YNR001C	CKA1	P15790	372 aa		4.08	□□□□□ -1.76
CIT1	YNR001C	PDX1	P16451	410 aa		4.08	□□□□□ -1.76
CIT1	YNR001C	NPL6	P32832	435 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 50.1 ms