RNA–Protein interactions for RNA: YNL339C

YRF1-6, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-6, Length 5,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-6YNL339C SPO71Q03868 1245 aa8.11□□□□□ -1.11
YRF1-6YNL339C DUS4Q06063 367 aa8.11□□□□□ -1.11
YRF1-6YNL339C TRE2Q08693 809 aa8.11□□□□□ -1.11
YRF1-6YNL339C PEX31P53203 462 aa8.11□□□□□ -1.11
YRF1-6YNL339C YNL108CP53929 270 aa8.11□□□□□ -1.11
YRF1-6YNL339C THI7Q05998 598 aa8.11□□□□□ -1.11
YRF1-6YNL339C DPH2P32461 534 aa8.11□□□□□ -1.11
YRF1-6YNL339C IXR1P33417 597 aa8.11□□□□□ -1.11
YRF1-6YNL339C EFM1P38732 585 aa8.11□□□□□ -1.11
YRF1-6YNL339C TAF9Q05027 157 aa8.11□□□□□ -1.11
YRF1-6YNL339C OPT2Q06593 877 aa8.11□□□□□ -1.11
YRF1-6YNL339C ADY2P25613 283 aa8.11□□□□□ -1.11
YRF1-6YNL339C SHP1P34223 423 aa8.11□□□□□ -1.11
YRF1-6YNL339C NDT80P38830 627 aa8.11□□□□□ -1.11
YRF1-6YNL339C LYS9P38999 446 aa8.11□□□□□ -1.11
YRF1-6YNL339C MDV1P47025 714 aa8.11□□□□□ -1.11
YRF1-6YNL339C YNL146WP53906 100 aa8.11□□□□□ -1.11
YRF1-6YNL339C YNL010WP53981 241 aaKnown RBP8.11□□□□□ -1.11
YRF1-6YNL339C DPB4Q04603 196 aaKnown RBP8.11□□□□□ -1.11
YRF1-6YNL339C GVP36P40531 326 aaKnown RBP8.11□□□□□ -1.11
YRF1-6YNL339C ARF3P40994 183 aaRIP-Chip data8.11□□□□□ -1.11not detected
YRF1-6YNL339C TMN3P40071 706 aa8.1□□□□□ -1.11
YRF1-6YNL339C LIA1P47120 325 aaKnown RBP8.1□□□□□ -1.11
YRF1-6YNL339C MAL11P53048 616 aa8.1□□□□□ -1.11
YRF1-6YNL339C NSE5Q03718 556 aa8.1□□□□□ -1.11
YRF1-6YNL339C TAF12Q03761 539 aa8.1□□□□□ -1.11
YRF1-6YNL339C IES4Q08561 116 aa8.1□□□□□ -1.11
YRF1-6YNL339C GAP1P19145 602 aaPredicted RBP8.1□□□□□ -1.11
YRF1-6YNL339C ARG1P22768 420 aa8.1□□□□□ -1.11
YRF1-6YNL339C DCC1P25559 380 aa8.1□□□□□ -1.11
YRF1-6YNL339C SPB1P25582 841 aaPredicted RBP8.1□□□□□ -1.11
YRF1-6YNL339C GAC1P28006 793 aa8.1□□□□□ -1.11
YRF1-6YNL339C BEM3P32873 1128 aa8.1□□□□□ -1.11
YRF1-6YNL339C PRM9P39551 298 aa8.1□□□□□ -1.11
YRF1-6YNL339C RSC8P43609 557 aaKnown RBP8.1□□□□□ -1.11
YRF1-6YNL339C CUS2P53830 285 aaPredicted RBP8.1□□□□□ -1.11
YRF1-6YNL339C YNL140CP53910 189 aa8.1□□□□□ -1.11
YRF1-6YNL339C YMR102CQ03177 834 aa8.1□□□□□ -1.11
YRF1-6YNL339C SPC2Q04969 178 aa8.1□□□□□ -1.11
YRF1-6YNL339C NCA2Q12374 616 aa8.1□□□□□ -1.11
YRF1-6YNL339C RGS2Q99188 309 aa8.1□□□□□ -1.11
YRF1-6YNL339C SEC2P17065 759 aa8.1□□□□□ -1.11
YRF1-6YNL339C GPD2P41911 440 aaKnown RBP8.1□□□□□ -1.11
YRF1-6YNL339C ALK1P43633 760 aaKnown RBP8.1□□□□□ -1.11
YRF1-6YNL339C GPI1P53306 609 aa8.1□□□□□ -1.11
YRF1-6YNL339C REX2P54964 269 aaKnown RBP8.1□□□□□ -1.11
YRF1-6YNL339C PET117Q02771 107 aa8.1□□□□□ -1.11
YRF1-6YNL339C RCR2Q03446 210 aaKnown RBP8.1□□□□□ -1.11
YRF1-6YNL339C ENT5Q03769 411 aaKnown RBP8.1□□□□□ -1.11
YRF1-6YNL339C SNF3P10870 884 aa8.1□□□□□ -1.11
YRF1-6YNL339C STE11P23561 717 aa8.1□□□□□ -1.11
YRF1-6YNL339C SPC34P36131 295 aa8.1□□□□□ -1.11
YRF1-6YNL339C YRO2P38079 344 aa8.1□□□□□ -1.11
YRF1-6YNL339C RCK2P38623 610 aa8.1□□□□□ -1.11
YRF1-6YNL339C IRR1P40541 1150 aa8.1□□□□□ -1.11
YRF1-6YNL339C RMD8P43620 662 aa8.1□□□□□ -1.11
YRF1-6YNL339C TIM54P47045 478 aa8.1□□□□□ -1.11
YRF1-6YNL339C GCV1P48015 400 aa8.1□□□□□ -1.11
YRF1-6YNL339C ORC5P50874 479 aa8.1□□□□□ -1.11
YRF1-6YNL339C DAK1P54838 584 aaKnown RBP8.1□□□□□ -1.11
YRF1-6YNL339C MTG1Q03151 367 aaPredicted RBP8.1□□□□□ -1.11
YRF1-6YNL339C VIK1Q12045 647 aa8.1□□□□□ -1.11
YRF1-6YNL339C TRP2P00899 507 aaKnown RBP8.09□□□□□ -1.11
YRF1-6YNL339C SPS1P08458 490 aa8.09□□□□□ -1.11
YRF1-6YNL339C GAL11P19659 1081 aa8.09□□□□□ -1.11
YRF1-6YNL339C RER1P25560 188 aa8.09□□□□□ -1.11
YRF1-6YNL339C HRR25P29295 494 aaKnown RBP8.09□□□□□ -1.11
YRF1-6YNL339C OPT1P40897 799 aa8.09□□□□□ -1.11
YRF1-6YNL339C REF2P42073 533 aaPredicted RBP8.09□□□□□ -1.11
YRF1-6YNL339C MTR3P48240 250 aaPredicted RBP8.09□□□□□ -1.11
YRF1-6YNL339C SPC19Q03954 165 aa8.09□□□□□ -1.11
YRF1-6YNL339C SPE4Q12455 300 aa8.09□□□□□ -1.11
YRF1-6YNL339C NHA1Q99271 985 aa8.09□□□□□ -1.11
YRF1-6YNL339C MRPS28P21771 286 aa8.09□□□□□ -1.11
YRF1-6YNL339C GUF1P46943 645 aa8.09□□□□□ -1.11
YRF1-6YNL339C NOP15P53927 220 aaPredicted RBP8.09□□□□□ -1.11
YRF1-6YNL339C ARX1Q03862 593 aaKnown RBP8.09□□□□□ -1.11
YRF1-6YNL339C BUD22Q04347 519 aaKnown RBP8.09□□□□□ -1.11
YRF1-6YNL339C ZPS1Q12512 249 aa8.09□□□□□ -1.11
YRF1-6YNL339C ADE4P04046 510 aaKnown RBP8.09□□□□□ -1.11
YRF1-6YNL339C CBS2P14905 389 aa8.09□□□□□ -1.11
YRF1-6YNL339C ESS1P22696 170 aa8.09□□□□□ -1.11
YRF1-6YNL339C TRK2P28584 889 aa8.09□□□□□ -1.11
YRF1-6YNL339C YHR078WP38799 552 aa8.09□□□□□ -1.11
YRF1-6YNL339C LOC1P43586 204 aaPredicted RBP8.09□□□□□ -1.11
YRF1-6YNL339C ASI1P54074 624 aa8.09□□□□□ -1.11
YRF1-6YNL339C UBP2Q01476 1272 aa8.09□□□□□ -1.11
YRF1-6YNL339C NGL3Q03210 505 aa8.09□□□□□ -1.11
YRF1-6YNL339C RSB1Q08417 382 aa8.09□□□□□ -1.11
YRF1-6YNL339C VBA3P25594 458 aa8.09□□□□□ -1.11
YRF1-6YNL339C VBA5P36172 582 aa8.09□□□□□ -1.11
YRF1-6YNL339C POB3Q04636 552 aaKnown RBP8.09□□□□□ -1.11
YRF1-6YNL339C TRP3P00937 484 aa8.08□□□□□ -1.12
YRF1-6YNL339C PUP3P25451 205 aaKnown RBP8.08□□□□□ -1.12
YRF1-6YNL339C GBP2P25555 427 aaKnown RBP RIP-Chip data8.08□□□□□ -1.12not detected
YRF1-6YNL339C PXL1P36166 706 aa8.08□□□□□ -1.12
YRF1-6YNL339C PMC1P38929 1173 aaPredicted RBP8.08□□□□□ -1.12
YRF1-6YNL339C THI6P41835 540 aa8.08□□□□□ -1.12
YRF1-6YNL339C YPL109CQ02981 657 aa8.08□□□□□ -1.12
YRF1-6YNL339C NOB1Q08444 459 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 76.6 ms