RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUS1	YMR240C	CBR1	P38626	284 aa	Known RBP	5.23	□□□□□ -1.57
CUS1	YMR240C	STB5	P38699	743 aa		5.23	□□□□□ -1.57
CUS1	YMR240C	SMK1	P41808	388 aa		5.23	□□□□□ -1.57
CUS1	YMR240C	THI6	P41835	540 aa		5.23	□□□□□ -1.57
CUS1	YMR240C	MSE1	P48525	536 aa		5.23	□□□□□ -1.57
CUS1	YMR240C	DAK1	P54838	584 aa	Known RBP	5.23	□□□□□ -1.57
CUS1	YMR240C	OPY2	Q06810	360 aa		5.23	□□□□□ -1.57
CUS1	YMR240C	PUS9	Q12069	462 aa		5.23	□□□□□ -1.57
CUS1	YMR240C	ACF2	Q12168	779 aa		5.23	□□□□□ -1.57
CUS1	YMR240C	TUB2	P02557	457 aa	Known RBP	5.23	□□□□□ -1.57
CUS1	YMR240C	SWI4	P25302	1093 aa	Known RBP	5.23	□□□□□ -1.57
CUS1	YMR240C	KSP1	P38691	1029 aa	Known RBP	5.23	□□□□□ -1.57
CUS1	YMR240C	FSH1	P38777	243 aa	Known RBP	5.23	□□□□□ -1.57
CUS1	YMR240C	RAD26	P40352	1085 aa		5.23	□□□□□ -1.57
CUS1	YMR240C	PSF2	P40359	213 aa		5.23	□□□□□ -1.57
CUS1	YMR240C	IDS2	P46958	469 aa		5.23	□□□□□ -1.57
CUS1	YMR240C	CTR1	P49573	406 aa		5.23	□□□□□ -1.57
CUS1	YMR240C	HOF1	Q05080	669 aa		5.23	□□□□□ -1.57
CUS1	YMR240C	AIM6	Q07716	390 aa		5.23	□□□□□ -1.57
CUS1	YMR240C	RPS7A	P26786	190 aa	Known RBP	5.22	□□□□□ -1.57
CUS1	YMR240C	MRPL36	P36531	177 aa		5.22	□□□□□ -1.57
CUS1	YMR240C	UBS1	P38290	277 aa		5.22	□□□□□ -1.57
CUS1	YMR240C	CHS7	P38843	316 aa		5.22	□□□□□ -1.57
CUS1	YMR240C	NMA2	P53204	395 aa		5.22	□□□□□ -1.57
CUS1	YMR240C	MFM1	Q02783	413 aa		5.22	□□□□□ -1.57
CUS1	YMR240C	MUK1	Q02866	612 aa		5.22	□□□□□ -1.57
CUS1	YMR240C	ATG21	Q02887	496 aa		5.22	□□□□□ -1.57
CUS1	YMR240C	USA1	Q03714	838 aa		5.22	□□□□□ -1.57
CUS1	YMR240C	TMA64	Q04600	565 aa	Known RBP	5.22	□□□□□ -1.57
CUS1	YMR240C	TFC6	Q06339	672 aa		5.22	□□□□□ -1.57
CUS1	YMR240C	ARP2	P32381	391 aa	Known RBP	5.21	□□□□□ -1.58
CUS1	YMR240C	RRN3	P36070	627 aa		5.21	□□□□□ -1.58
CUS1	YMR240C	GLG1	P36143	616 aa		5.21	□□□□□ -1.58
CUS1	YMR240C	BST1	P43571	1029 aa		5.21	□□□□□ -1.58
CUS1	YMR240C	HBT1	Q07653	1046 aa	Known RBP	5.21	□□□□□ -1.58
CUS1	YMR240C	ICL2	Q12031	575 aa		5.21	□□□□□ -1.58
CUS1	YMR240C	STE4	P18851	423 aa		5.2	□□□□□ -1.58
CUS1	YMR240C	BET2	P20133	325 aa		5.2	□□□□□ -1.58
CUS1	YMR240C	CNE1	P27825	502 aa		5.2	□□□□□ -1.58
CUS1	YMR240C	PRE2	P30656	287 aa	Known RBP	5.2	□□□□□ -1.58
CUS1	YMR240C	GMH1	P36125	273 aa		5.2	□□□□□ -1.58
CUS1	YMR240C	CCL1	P37366	393 aa		5.2	□□□□□ -1.58
CUS1	YMR240C	KAP123	P40069	1113 aa	Known RBP	5.2	□□□□□ -1.58
CUS1	YMR240C	CTF18	P49956	741 aa		5.2	□□□□□ -1.58
CUS1	YMR240C	TIM44	Q01852	431 aa		5.2	□□□□□ -1.58
CUS1	YMR240C	RPS15	Q01855	142 aa	Known RBP	5.2	□□□□□ -1.58
CUS1	YMR240C	YMR206W	Q03695	313 aa		5.2	□□□□□ -1.58
CUS1	YMR240C	YPL216W	Q08964	1102 aa		5.2	□□□□□ -1.58
CUS1	YMR240C	NEW1	Q08972	1196 aa	Known RBP	5.2	□□□□□ -1.58
CUS1	YMR240C	LAM4	P38800	1345 aa		5.19	□□□□□ -1.58
CUS1	YMR240C	RER1	P25560	188 aa		5.19	□□□□□ -1.58
CUS1	YMR240C	YCR061W	P25639	631 aa		5.19	□□□□□ -1.58
CUS1	YMR240C	SDH8	P38345	138 aa		5.19	□□□□□ -1.58
CUS1	YMR240C	BDH2	P39713	417 aa		5.19	□□□□□ -1.58
CUS1	YMR240C	ARB1	P40024	610 aa	Known RBP	5.19	□□□□□ -1.58
CUS1	YMR240C	BNA1	P47096	177 aa		5.19	□□□□□ -1.58
CUS1	YMR240C	YIP4	P53093	235 aa		5.19	□□□□□ -1.58
CUS1	YMR240C	BUD17	P53727	317 aa		5.19	□□□□□ -1.58
CUS1	YMR240C	ESF2	P53743	316 aa	Known RBP	5.19	□□□□□ -1.58
CUS1	YMR240C	YPL108W	Q02872	168 aa	Predicted RBP	5.19	□□□□□ -1.58
CUS1	YMR240C	GSF2	Q04697	403 aa	Known RBP	5.19	□□□□□ -1.58
CUS1	YMR240C	CSR1	Q06705	408 aa	Known RBP	5.19	□□□□□ -1.58
CUS1	YMR240C	MCM10	P32354	571 aa		5.18	□□□□□ -1.58
CUS1	YMR240C	RPT3	P33298	428 aa	Known RBP	5.18	□□□□□ -1.58
CUS1	YMR240C	SLC1	P33333	303 aa		5.18	□□□□□ -1.58
CUS1	YMR240C	LOT5	P34234	306 aa		5.18	□□□□□ -1.58
CUS1	YMR240C	IFA38	P38286	347 aa		5.18	□□□□□ -1.58
CUS1	YMR240C	STB4	P50104	949 aa		5.18	□□□□□ -1.58
CUS1	YMR240C	NGL2	Q03264	515 aa	Known RBP	5.18	□□□□□ -1.58
CUS1	YMR240C	VID22	Q05934	901 aa		5.18	□□□□□ -1.58
CUS1	YMR240C	TGS1	Q12052	315 aa		5.18	□□□□□ -1.58
CUS1	YMR240C	TAF3	Q12297	353 aa		5.18	□□□□□ -1.58
CUS1	YMR240C	SUL2	Q12325	893 aa		5.18	□□□□□ -1.58
CUS1	YMR240C	LEU2	P04173	364 aa	Predicted RBP	5.17	□□□□□ -1.58
CUS1	YMR240C	SNF1	P06782	633 aa	Known RBP	5.17	□□□□□ -1.58
CUS1	YMR240C	CDC5	P32562	705 aa		5.17	□□□□□ -1.58
CUS1	YMR240C	PIH1	P38768	344 aa		5.17	□□□□□ -1.58
CUS1	YMR240C	CCT7	P42943	550 aa	Known RBP	5.17	□□□□□ -1.58
CUS1	YMR240C	SAP4	P53036	818 aa		5.17	□□□□□ -1.58
CUS1	YMR240C	YDR179W-A	Q03983	463 aa		5.17	□□□□□ -1.58
CUS1	YMR240C	PET122	P10355	254 aa		5.16	□□□□□ -1.58
CUS1	YMR240C	SWC3	P31376	625 aa		5.16	□□□□□ -1.58
CUS1	YMR240C	UME6	P39001	836 aa		5.16	□□□□□ -1.58
CUS1	YMR240C	YJL206C	P39529	758 aa		5.16	□□□□□ -1.58
CUS1	YMR240C	PMT6	P42934	759 aa		5.16	□□□□□ -1.58
CUS1	YMR240C	SPC98	P53540	846 aa		5.16	□□□□□ -1.58
CUS1	YMR240C	CTF4	Q01454	927 aa		5.16	□□□□□ -1.58
CUS1	YMR240C	TRS23	Q03784	219 aa		5.16	□□□□□ -1.58
CUS1	YMR240C	YMR018W	Q04364	514 aa		5.16	□□□□□ -1.58
CUS1	YMR240C	YDL073W	Q07454	984 aa		5.16	□□□□□ -1.58
CUS1	YMR240C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	5.15	□□□□□ -1.59	not detected
CUS1	YMR240C	RAD16	P31244	790 aa		5.15	□□□□□ -1.59
CUS1	YMR240C	OAR1	P35731	278 aa		5.15	□□□□□ -1.59
CUS1	YMR240C	YPT10	P38146	199 aa		5.15	□□□□□ -1.59
CUS1	YMR240C	SDS3	P40505	327 aa		5.15	□□□□□ -1.59
CUS1	YMR240C	RRT6	P53117	311 aa	Predicted RBP	5.15	□□□□□ -1.59
CUS1	YMR240C	MEP3	P53390	489 aa		5.15	□□□□□ -1.59
CUS1	YMR240C	VAM6	Q07468	1049 aa		5.15	□□□□□ -1.59
CUS1	YMR240C	TRM8	Q12009	286 aa		5.15	□□□□□ -1.59
CUS1	YMR240C	AAC1	P04710	309 aa		5.14	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms