RNA–Protein interactions for RNA: YMR238W

DFG5, Transcript of Putative mannosidase, yeast

Gene DFG5, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DFG5	YMR238W	YGL140C	P53120	1219 aa		5.75	□□□□□ -1.49
DFG5	YMR238W	CAF130	P53280	1122 aa	Predicted RBP	5.75	□□□□□ -1.49
DFG5	YMR238W	TOF1	P53840	1238 aa		5.75	□□□□□ -1.49
DFG5	YMR238W	CNM67	P53865	581 aa	Known RBP	5.75	□□□□□ -1.49
DFG5	YMR238W	UBX4	P54730	416 aa		5.75	□□□□□ -1.49
DFG5	YMR238W	YPL109C	Q02981	657 aa		5.75	□□□□□ -1.49
DFG5	YMR238W	ADI1	Q03677	179 aa		5.75	□□□□□ -1.49
DFG5	YMR238W	GAD1	Q04792	585 aa		5.75	□□□□□ -1.49
DFG5	YMR238W	YPL277C	Q08989	487 aa		5.75	□□□□□ -1.49
DFG5	YMR238W	PIN2	Q12057	282 aa		5.75	□□□□□ -1.49
DFG5	YMR238W	FAL1	Q12099	399 aa	Known RBP	5.75	□□□□□ -1.49
DFG5	YMR238W	NFI1	Q12216	726 aa		5.75	□□□□□ -1.49
DFG5	YMR238W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	RIP-Chip
DFG5	YMR238W	MTF2	P10849	440 aa		5.74	□□□□□ -1.49
DFG5	YMR238W	PMS1	P14242	873 aa		5.74	□□□□□ -1.49
DFG5	YMR238W	KSS1	P14681	368 aa		5.74	□□□□□ -1.49
DFG5	YMR238W	UBC1	P21734	215 aa	Known RBP	5.74	□□□□□ -1.49
DFG5	YMR238W	MSH2	P25847	964 aa		5.74	□□□□□ -1.49
DFG5	YMR238W	APL1	P27351	700 aa		5.74	□□□□□ -1.49
DFG5	YMR238W	MRE11	P32829	692 aa		5.74	□□□□□ -1.49
DFG5	YMR238W	RPT1	P33299	467 aa	Known RBP	5.74	□□□□□ -1.49
DFG5	YMR238W	MOT2	P34909	587 aa	Known RBP	5.74	□□□□□ -1.49
DFG5	YMR238W	ATG19	P35193	415 aa		5.74	□□□□□ -1.49
DFG5	YMR238W	NUP120	P35729	1037 aa		5.74	□□□□□ -1.49
DFG5	YMR238W	TRZ1	P36159	838 aa	Predicted RBP	5.74	□□□□□ -1.49
DFG5	YMR238W	RRF1	P38771	230 aa		5.74	□□□□□ -1.49
DFG5	YMR238W	TMA108	P40462	946 aa		5.74	□□□□□ -1.49
DFG5	YMR238W	EFM4	P40516	257 aa		5.74	□□□□□ -1.49
DFG5	YMR238W	CEP3	P40969	608 aa		5.74	□□□□□ -1.49
DFG5	YMR238W	NET1	P47035	1189 aa		5.74	□□□□□ -1.49
DFG5	YMR238W	APT1	P49435	187 aa	Known RBP	5.74	□□□□□ -1.49
DFG5	YMR238W	BOP3	P53958	396 aa		5.74	□□□□□ -1.49
DFG5	YMR238W	YDL073W	Q07454	984 aa		5.74	□□□□□ -1.49
DFG5	YMR238W	CRD1	Q07560	283 aa		5.74	□□□□□ -1.49
DFG5	YMR238W	YOR352W	Q08816	343 aa		5.74	□□□□□ -1.49
DFG5	YMR238W	MED1	Q12321	566 aa		5.74	□□□□□ -1.49
DFG5	YMR238W	ERP3	Q12403	225 aa		5.74	□□□□□ -1.49
DFG5	YMR238W	BRR1	Q99177	341 aa	Predicted RBP	5.74	□□□□□ -1.49
DFG5	YMR238W	PCK1	P10963	549 aa		5.73	□□□□□ -1.49
DFG5	YMR238W	VMA2	P16140	517 aa	Known RBP	5.73	□□□□□ -1.49
DFG5	YMR238W	RAD57	P25301	460 aa		5.73	□□□□□ -1.49
DFG5	YMR238W	DAL80	P26343	269 aa		5.73	□□□□□ -1.49
DFG5	YMR238W	SFP1	P32432	683 aa		5.73	□□□□□ -1.49
DFG5	YMR238W	HIR2	P32480	875 aa		5.73	□□□□□ -1.49
DFG5	YMR238W	NOP4	P37838	685 aa	Known RBP	5.73	□□□□□ -1.49
DFG5	YMR238W	VPS41	P38959	992 aa		5.73	□□□□□ -1.49
DFG5	YMR238W	GPB2	P39717	880 aa		5.73	□□□□□ -1.49
DFG5	YMR238W	SPC72	P39723	622 aa		5.73	□□□□□ -1.49
DFG5	YMR238W	RTT105	P40063	208 aa		5.73	□□□□□ -1.49
DFG5	YMR238W	YIL166C	P40445	542 aa		5.73	□□□□□ -1.49
DFG5	YMR238W	LCB2	P40970	561 aa		5.73	□□□□□ -1.49
DFG5	YMR238W	YJL045W	P47052	634 aa		5.73	□□□□□ -1.49
DFG5	YMR238W	VPS16	Q03308	798 aa		5.73	□□□□□ -1.49
DFG5	YMR238W	HRK1	Q08732	759 aa	Known RBP	5.73	□□□□□ -1.49
DFG5	YMR238W	YDL177C	Q12257	170 aa		5.73	□□□□□ -1.49
DFG5	YMR238W	TCP1	P12612	559 aa	Known RBP	5.72	□□□□□ -1.49
DFG5	YMR238W	GLK1	P17709	500 aa	Known RBP	5.72	□□□□□ -1.49
DFG5	YMR238W	TKL1	P23254	680 aa	Known RBP	5.72	□□□□□ -1.49
DFG5	YMR238W	STE11	P23561	717 aa		5.72	□□□□□ -1.49
DFG5	YMR238W	YSC83	P32792	385 aa		5.72	□□□□□ -1.49
DFG5	YMR238W	XRS2	P33301	854 aa		5.72	□□□□□ -1.49
DFG5	YMR238W	ADD66	P36040	267 aa		5.72	□□□□□ -1.49
DFG5	YMR238W	MCD4	P36051	919 aa		5.72	□□□□□ -1.49
DFG5	YMR238W	DBP7	P36120	742 aa	Known RBP	5.72	□□□□□ -1.49
DFG5	YMR238W	ERC1	P38767	581 aa		5.72	□□□□□ -1.49
DFG5	YMR238W	QNS1	P38795	714 aa	Known RBP	5.72	□□□□□ -1.49
DFG5	YMR238W	RPN3	P40016	523 aa	Known RBP	5.72	□□□□□ -1.49
DFG5	YMR238W	ARB1	P40024	610 aa	Known RBP	5.72	□□□□□ -1.49
DFG5	YMR238W	YGR125W	P53273	1036 aa		5.72	□□□□□ -1.49
DFG5	YMR238W	ZPR1	P53303	486 aa	Known RBP	5.72	□□□□□ -1.49
DFG5	YMR238W	NCS2	P53923	493 aa	Predicted RBP	5.72	□□□□□ -1.49
DFG5	YMR238W	COG6	P53959	839 aa		5.72	□□□□□ -1.49
DFG5	YMR238W	ERV41	Q04651	352 aa		5.72	□□□□□ -1.49
DFG5	YMR238W	YDR286C	Q05530	114 aa		5.72	□□□□□ -1.49
DFG5	YMR238W	ADE13	Q05911	482 aa	Known RBP	5.72	□□□□□ -1.49
DFG5	YMR238W	CUR1	Q06469	252 aa		5.72	□□□□□ -1.49
DFG5	YMR238W	ARR1	Q06596	294 aa		5.72	□□□□□ -1.49
DFG5	YMR238W	MDM36	Q06820	579 aa		5.72	□□□□□ -1.49
DFG5	YMR238W	PGC1	Q08959	321 aa		5.72	□□□□□ -1.49
DFG5	YMR238W	HOM2	P13663	365 aa	Known RBP	5.71	□□□□□ -1.5
DFG5	YMR238W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	not detected
DFG5	YMR238W	THI4	P32318	326 aa		5.71	□□□□□ -1.5
DFG5	YMR238W	HXT1	P32465	570 aa		5.71	□□□□□ -1.5
DFG5	YMR238W	EUG1	P32474	517 aa		5.71	□□□□□ -1.5
DFG5	YMR238W	YKR018C	P36114	725 aa		5.71	□□□□□ -1.5
DFG5	YMR238W	REG2	P38232	338 aa		5.71	□□□□□ -1.5
DFG5	YMR238W	PIC2	P40035	300 aa		5.71	□□□□□ -1.5
DFG5	YMR238W	RET2	P43621	546 aa		5.71	□□□□□ -1.5
DFG5	YMR238W	VPS60	Q03390	229 aa		5.71	□□□□□ -1.5
DFG5	YMR238W	SOV1	Q04748	898 aa		5.71	□□□□□ -1.5
DFG5	YMR238W	YMR321C	Q04898	105 aa		5.71	□□□□□ -1.5
DFG5	YMR238W	SML1	Q04964	104 aa		5.71	□□□□□ -1.5
DFG5	YMR238W	DUS4	Q06063	367 aa		5.71	□□□□□ -1.5
DFG5	YMR238W	SFI1	Q12369	946 aa		5.71	□□□□□ -1.5
DFG5	YMR238W	GAL1	P04385	528 aa		5.7	□□□□□ -1.5
DFG5	YMR238W	UBP13	P38187	747 aa		5.7	□□□□□ -1.5
DFG5	YMR238W	SET5	P38890	526 aa	Known RBP	5.7	□□□□□ -1.5
DFG5	YMR238W	BUD16	P39988	312 aa		5.7	□□□□□ -1.5
DFG5	YMR238W	JEM1	P40358	645 aa		5.7	□□□□□ -1.5
DFG5	YMR238W	MNT3	P40549	630 aa		5.7	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 11 ms