RNA–Protein interactions for RNA: YLR353W

BUD8, Transcript of Protein involved in bud-site selection, yeastyeast

Gene BUD8, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD8YLR353W EMC1P25574 760 aa5.18□□□□□ -1.58
BUD8YLR353W MSS4P38994 779 aa5.18□□□□□ -1.58
BUD8YLR353W DUN1P39009 513 aa5.18□□□□□ -1.58
BUD8YLR353W ECM1P39715 212 aa5.18□□□□□ -1.58
BUD8YLR353W TEP1P53916 434 aa5.18□□□□□ -1.58
BUD8YLR353W MCM21Q06675 368 aa5.18□□□□□ -1.58
BUD8YLR353W STP4Q07351 490 aa5.18□□□□□ -1.58
BUD8YLR353W ISA1Q07821 250 aaPredicted RBP5.18□□□□□ -1.58
BUD8YLR353W GPB1Q08886 897 aa5.18□□□□□ -1.58
BUD8YLR353W PSF3Q12146 194 aa5.18□□□□□ -1.58
BUD8YLR353W ARP7Q12406 477 aa5.18□□□□□ -1.58
BUD8YLR353W TRA1P38811 3744 aa5.18□□□□□ -1.58
BUD8YLR353W POT1P27796 417 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
BUD8YLR353W PET127P32606 800 aa5.18□□□□□ -1.58
BUD8YLR353W APL2P36000 726 aaPredicted RBP5.18□□□□□ -1.58
BUD8YLR353W SDS22P36047 338 aa5.18□□□□□ -1.58
BUD8YLR353W YBR259WP38338 688 aa5.18□□□□□ -1.58
BUD8YLR353W MEF2P39677 819 aa5.18□□□□□ -1.58
BUD8YLR353W LYS14P40971 790 aa5.18□□□□□ -1.58
BUD8YLR353W RRP46P53256 223 aaPredicted RBP5.18□□□□□ -1.58
BUD8YLR353W NOP12Q08208 459 aaKnown RBP5.18□□□□□ -1.58
BUD8YLR353W VHS3Q08438 674 aa5.18□□□□□ -1.58
BUD8YLR353W YEL076C-AP0CX16 216 aa5.17□□□□□ -1.58
BUD8YLR353W YLR464WP0CX17 216 aa5.17□□□□□ -1.58
BUD8YLR353W IME1P21190 360 aa5.17□□□□□ -1.58
BUD8YLR353W SSH4P32343 579 aa5.17□□□□□ -1.58
BUD8YLR353W IME2P32581 645 aa5.17□□□□□ -1.58
BUD8YLR353W PUB1P32588 453 aaKnown RBP RIP-Chip data5.17□□□□□ -1.58not detected
BUD8YLR353W YEL076CP39971 216 aa5.17□□□□□ -1.58
BUD8YLR353W VID27P40157 782 aa5.17□□□□□ -1.58
BUD8YLR353W RPT2P40327 437 aaKnown RBP5.17□□□□□ -1.58
BUD8YLR353W CCT8P47079 568 aaKnown RBP5.17□□□□□ -1.58
BUD8YLR353W REC102Q02721 264 aa5.17□□□□□ -1.58
BUD8YLR353W YML131WQ03102 365 aa5.17□□□□□ -1.58
BUD8YLR353W HMO1Q03973 246 aaKnown RBP5.17□□□□□ -1.58
BUD8YLR353W RXT3Q07458 294 aa5.17□□□□□ -1.58
BUD8YLR353W NPC2Q12408 173 aa5.17□□□□□ -1.58
BUD8YLR353W MEC1P38111 2368 aa5.16□□□□□ -1.58
BUD8YLR353W FRS1P15624 595 aaKnown RBP5.16□□□□□ -1.58
BUD8YLR353W BET2P20133 325 aa5.16□□□□□ -1.58
BUD8YLR353W PRD1P25375 712 aa5.16□□□□□ -1.58
BUD8YLR353W YUR1P26725 428 aa5.16□□□□□ -1.58
BUD8YLR353W OPY1P38271 328 aa5.16□□□□□ -1.58
BUD8YLR353W SSP120P39931 234 aaKnown RBP5.16□□□□□ -1.58
BUD8YLR353W YIR014WP40570 242 aa5.16□□□□□ -1.58
BUD8YLR353W SLU7Q02775 382 aaKnown RBP5.16□□□□□ -1.58
BUD8YLR353W NSE5Q03718 556 aa5.16□□□□□ -1.58
BUD8YLR353W ACK1Q07622 623 aaPredicted RBP5.16□□□□□ -1.58
BUD8YLR353W BRE4Q07660 1125 aa5.16□□□□□ -1.58
BUD8YLR353W SEC18P18759 758 aaKnown RBP5.16□□□□□ -1.58
BUD8YLR353W MSH1P25846 959 aa5.16□□□□□ -1.58
BUD8YLR353W RGT1P32862 1170 aa5.16□□□□□ -1.58
BUD8YLR353W TGL1P34163 548 aa5.16□□□□□ -1.58
BUD8YLR353W APT2P36973 181 aa5.16□□□□□ -1.58
BUD8YLR353W MOT3P54785 490 aaKnown RBP5.16□□□□□ -1.58
BUD8YLR353W GCN5Q03330 439 aa5.16□□□□□ -1.58
BUD8YLR353W RCR2Q03446 210 aaKnown RBP5.16□□□□□ -1.58
BUD8YLR353W YDR132CQ03900 495 aa5.16□□□□□ -1.58
BUD8YLR353W CIA1Q05583 330 aa5.16□□□□□ -1.58
BUD8YLR353W HIM1Q06674 414 aa5.16□□□□□ -1.58
BUD8YLR353W SSP2Q08646 371 aa5.16□□□□□ -1.58
BUD8YLR353W KCS1Q12494 1050 aa5.16□□□□□ -1.58
BUD8YLR353W YPT7P32939 208 aa5.15□□□□□ -1.59
BUD8YLR353W LRG1P35688 1017 aa5.15□□□□□ -1.59
BUD8YLR353W NOC2P39744 710 aaKnown RBP5.15□□□□□ -1.59
BUD8YLR353W SCS2P40075 244 aaKnown RBP5.15□□□□□ -1.59
BUD8YLR353W YGR266WP53326 701 aa5.15□□□□□ -1.59
BUD8YLR353W YAP6Q03935 383 aa5.15□□□□□ -1.59
BUD8YLR353W PEX19Q07418 342 aa5.15□□□□□ -1.59
BUD8YLR353W SEG2P34250 1132 aa5.14□□□□□ -1.59
BUD8YLR353W YHR112CP38716 378 aa5.14□□□□□ -1.59
BUD8YLR353W BUD8P41698 603 aa5.14□□□□□ -1.59
BUD8YLR353W TAF4P50105 388 aa5.14□□□□□ -1.59
BUD8YLR353W RPT4P53549 437 aaKnown RBP5.14□□□□□ -1.59
BUD8YLR353W MRPL22P53881 309 aa5.14□□□□□ -1.59
BUD8YLR353W EAF7P53911 425 aaKnown RBP5.14□□□□□ -1.59
BUD8YLR353W YML053CQ04978 212 aa5.14□□□□□ -1.59
BUD8YLR353W THI22Q06490 572 aa5.14□□□□□ -1.59
BUD8YLR353W SGO1Q08490 590 aa5.14□□□□□ -1.59
BUD8YLR353W TRM11Q12463 433 aa5.14□□□□□ -1.59
BUD8YLR353W VPS5Q92331 675 aa5.14□□□□□ -1.59
BUD8YLR353W ADH4P10127 382 aa5.13□□□□□ -1.59
BUD8YLR353W PUP3P25451 205 aaKnown RBP5.13□□□□□ -1.59
BUD8YLR353W CDC20P26309 610 aa5.13□□□□□ -1.59
BUD8YLR353W RPP1P38786 293 aa5.13□□□□□ -1.59
BUD8YLR353W YPT35P38815 214 aaKnown RBP5.13□□□□□ -1.59
BUD8YLR353W ERP2P39704 215 aa5.13□□□□□ -1.59
BUD8YLR353W SWD1P39706 426 aa5.13□□□□□ -1.59
BUD8YLR353W ERR3P42222 437 aa5.13□□□□□ -1.59
BUD8YLR353W HEF3P53978 1044 aaKnown RBP5.13□□□□□ -1.59
BUD8YLR353W NRG1Q03125 231 aa5.13□□□□□ -1.59
BUD8YLR353W PPN1Q04119 674 aa5.13□□□□□ -1.59
BUD8YLR353W BLS1Q06071 122 aa5.13□□□□□ -1.59
BUD8YLR353W RTK1Q12100 620 aaPredicted RBP5.13□□□□□ -1.59
BUD8YLR353W VAS1P07806 1104 aaKnown RBP5.13□□□□□ -1.59
BUD8YLR353W MIC60P36112 540 aa5.13□□□□□ -1.59
BUD8YLR353W SHM2P37291 469 aaKnown RBP5.13□□□□□ -1.59
BUD8YLR353W APM3P38153 483 aa5.13□□□□□ -1.59
BUD8YLR353W MAD2P40958 196 aa5.13□□□□□ -1.59
BUD8YLR353W PXA1P41909 870 aa5.13□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms