RNA–Protein interactions for RNA: YLR018C

POM34, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeastyeast

Gene POM34, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
POM34YLR018C PPE1P38796 400 aa10.2□□□□□ -0.78
POM34YLR018C SFB3P38810 929 aa10.2□□□□□ -0.78
POM34YLR018C ATM1P40416 690 aa10.2□□□□□ -0.78
POM34YLR018C MND2P40577 368 aa10.2□□□□□ -0.78
POM34YLR018C RPS10BP46784 105 aaKnown RBP10.2□□□□□ -0.78
POM34YLR018C PIR3Q03180 325 aa10.2□□□□□ -0.78
POM34YLR018C YMR027WQ04371 470 aa10.2□□□□□ -0.78
POM34YLR018C NRT1Q08485 598 aa10.2□□□□□ -0.78
POM34YLR018C RPS10AQ08745 105 aaPredicted RBP10.2□□□□□ -0.78
POM34YLR018C HEM15P16622 393 aa10.19□□□□□ -0.78
POM34YLR018C YME1P32795 747 aa10.19□□□□□ -0.78
POM34YLR018C ECM13P38195 257 aa10.19□□□□□ -0.78
POM34YLR018C UFE1P41834 346 aa10.19□□□□□ -0.78
POM34YLR018C SNG1P46950 547 aa10.19□□□□□ -0.78
POM34YLR018C RTT101P47050 842 aa10.19□□□□□ -0.78
POM34YLR018C URB2P47108 1174 aa10.19□□□□□ -0.78
POM34YLR018C TAH11P47112 604 aa10.19□□□□□ -0.78
POM34YLR018C TCB2P48231 1178 aa10.19□□□□□ -0.78
POM34YLR018C TRM112P53738 135 aaPredicted RBP10.19□□□□□ -0.78
POM34YLR018C BSP1Q06604 576 aa10.19□□□□□ -0.78
POM34YLR018C ENO2P00925 437 aaKnown RBP10.18□□□□□ -0.78
POM34YLR018C IMA3P0CW40 589 aa10.18□□□□□ -0.78
POM34YLR018C IMA4P0CW41 589 aa10.18□□□□□ -0.78
POM34YLR018C UTR2P32623 467 aa10.18□□□□□ -0.78
POM34YLR018C KES1P35844 434 aaKnown RBP10.18□□□□□ -0.78
POM34YLR018C ALA1P40825 983 aaKnown RBP10.18□□□□□ -0.78
POM34YLR018C CTK3P46963 296 aaPredicted RBP10.18□□□□□ -0.78
POM34YLR018C YJL132WP47014 750 aa10.18□□□□□ -0.78
POM34YLR018C YJR079WP47126 109 aa10.18□□□□□ -0.78
POM34YLR018C PSP1P50896 841 aaKnown RBP10.18□□□□□ -0.78
POM34YLR018C RTA1P53047 317 aa10.18□□□□□ -0.78
POM34YLR018C ZIP2P53061 704 aa10.18□□□□□ -0.78
POM34YLR018C PCL10P53124 433 aa10.18□□□□□ -0.78
POM34YLR018C COQ6P53318 479 aa10.18□□□□□ -0.78
POM34YLR018C NRD1P53617 575 aaKnown RBP RIP-Chip data10.18□□□□□ -0.78not detected
POM34YLR018C SHR3Q02774 210 aa10.18□□□□□ -0.78
POM34YLR018C USA1Q03714 838 aa10.18□□□□□ -0.78
POM34YLR018C YMR160WQ03823 816 aa10.18□□□□□ -0.78
POM34YLR018C PIG1Q06216 648 aa10.18□□□□□ -0.78
POM34YLR018C SWC7Q06707 132 aa10.18□□□□□ -0.78
POM34YLR018C IMA2Q08295 589 aa10.18□□□□□ -0.78
POM34YLR018C AAD15Q08361 143 aa10.18□□□□□ -0.78
POM34YLR018C MPC54Q08550 464 aa10.18□□□□□ -0.78
POM34YLR018C YOR223WQ12015 292 aa10.18□□□□□ -0.78
POM34YLR018C HMG2P12684 1045 aa10.17□□□□□ -0.78
POM34YLR018C MTF1P14908 341 aaKnown RBP10.17□□□□□ -0.78
POM34YLR018C PEX34P25584 144 aa10.17□□□□□ -0.78
POM34YLR018C CDC20P26309 610 aa10.17□□□□□ -0.78
POM34YLR018C URA7P28274 579 aaKnown RBP10.17□□□□□ -0.78
POM34YLR018C SYN8P31377 255 aa10.17□□□□□ -0.78
POM34YLR018C PSE1P32337 1089 aaKnown RBP10.17□□□□□ -0.78
POM34YLR018C KTR4P38131 464 aa10.17□□□□□ -0.78
POM34YLR018C YAT2P40017 923 aa10.17□□□□□ -0.78
POM34YLR018C SAE2P46946 345 aa10.17□□□□□ -0.78
POM34YLR018C DOS2P54858 310 aa10.17□□□□□ -0.78
POM34YLR018C RNT1Q02555 471 aa10.17□□□□□ -0.78
POM34YLR018C SLU7Q02775 382 aaKnown RBP10.17□□□□□ -0.78
POM34YLR018C INP2Q03824 705 aa10.17□□□□□ -0.78
POM34YLR018C ARP9Q05123 467 aa10.17□□□□□ -0.78
POM34YLR018C GRX8Q05926 109 aa10.17□□□□□ -0.78
POM34YLR018C YOR387CQ08910 206 aa10.17□□□□□ -0.78
POM34YLR018C SPE3Q12074 293 aaKnown RBP10.17□□□□□ -0.78
POM34YLR018C KAR4P25583 335 aa10.16□□□□□ -0.78
POM34YLR018C ILV6P25605 309 aaKnown RBP10.16□□□□□ -0.78
POM34YLR018C MET22P32179 357 aa10.16□□□□□ -0.78
POM34YLR018C SEC6P32844 805 aa10.16□□□□□ -0.78
POM34YLR018C PEX28P38848 579 aa10.16□□□□□ -0.78
POM34YLR018C YIL161WP40449 235 aaKnown RBP10.16□□□□□ -0.78
POM34YLR018C BST1P43571 1029 aa10.16□□□□□ -0.78
POM34YLR018C IML2P47031 731 aa10.16□□□□□ -0.78
POM34YLR018C TAN1P53072 289 aaPredicted RBP10.16□□□□□ -0.78
POM34YLR018C YPR003CP53394 754 aa10.16□□□□□ -0.78
POM34YLR018C RPN4Q03465 531 aa10.16□□□□□ -0.78
POM34YLR018C ECM38Q05902 660 aaPredicted RBP10.16□□□□□ -0.78
POM34YLR018C ADE13Q05911 482 aaKnown RBP10.16□□□□□ -0.78
POM34YLR018C UTP13Q05946 817 aaKnown RBP10.16□□□□□ -0.78
POM34YLR018C AFI1Q99222 893 aa10.16□□□□□ -0.78
POM34YLR018C MRPL25P23369 157 aa10.15□□□□□ -0.78
POM34YLR018C TSR4P25040 408 aa10.15□□□□□ -0.78
POM34YLR018C GID7P25569 745 aa10.15□□□□□ -0.78
POM34YLR018C ISF1P32488 338 aa10.15□□□□□ -0.78
POM34YLR018C MRS6P32864 603 aaKnown RBP10.15□□□□□ -0.78
POM34YLR018C PTC3P34221 468 aaKnown RBP10.15□□□□□ -0.78
POM34YLR018C OAF3P36023 863 aa10.15□□□□□ -0.78
POM34YLR018C SMF2P38778 549 aa10.15□□□□□ -0.78
POM34YLR018C CIN4P39110 191 aa10.15□□□□□ -0.78
POM34YLR018C KTR7P40504 517 aa10.15□□□□□ -0.78
POM34YLR018C ROK1P45818 564 aaPredicted RBP10.15□□□□□ -0.78
POM34YLR018C TRF5P48561 642 aaKnown RBP10.15□□□□□ -0.78
POM34YLR018C MRX6P48564 524 aa10.15□□□□□ -0.78
POM34YLR018C PRP24P49960 444 aaKnown RBP10.15□□□□□ -0.78
POM34YLR018C ADI1Q03677 179 aa10.15□□□□□ -0.78
POM34YLR018C MSH6Q03834 1242 aa10.15□□□□□ -0.78
POM34YLR018C YCS4Q06156 1176 aa10.15□□□□□ -0.78
POM34YLR018C OMS1Q06668 471 aa10.15□□□□□ -0.78
POM34YLR018C LDB17Q12342 491 aa10.15□□□□□ -0.78
POM34YLR018C TEF1P02994 458 aaKnown RBP10.14□□□□□ -0.79
POM34YLR018C ILS1P09436 1072 aaKnown RBP10.14□□□□□ -0.79
POM34YLR018C ERR1P0CX10 437 aa10.14□□□□□ -0.79
POM34YLR018C ERR2P0CX11 437 aa10.14□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms