RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOA1	YKL213C	MND1	P53102	219 aa		5.07	□□□□□ -1.6
DOA1	YKL213C	NOP15	P53927	220 aa	Predicted RBP	5.07	□□□□□ -1.6
DOA1	YKL213C	GPD1	Q00055	391 aa	Known RBP	5.07	□□□□□ -1.6
DOA1	YKL213C	HAS1	Q03532	505 aa	Known RBP	5.07	□□□□□ -1.6
DOA1	YKL213C	ESC2	Q06340	456 aa		5.07	□□□□□ -1.6
DOA1	YKL213C	MRI1	Q06489	411 aa	Known RBP	5.07	□□□□□ -1.6
DOA1	YKL213C	SIL1	Q08199	421 aa		5.07	□□□□□ -1.6
DOA1	YKL213C	RAD59	Q12223	238 aa		5.07	□□□□□ -1.6
DOA1	YKL213C	YLR422W	Q06409	1932 aa		5.07	□□□□□ -1.6
DOA1	YKL213C	ERG11	P10614	530 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	COQ8	P27697	501 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	PEX2	P32800	271 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	BCH2	P36122	765 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	CIN4	P39110	191 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	SAP1	P39955	897 aa	Known RBP	5.06	□□□□□ -1.6
DOA1	YKL213C	YEL075C	P39972	122 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	PSY2	P40164	858 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	MAD1	P40957	749 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	MAF1	P41910	395 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	YGR111W	P53265	400 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	MUB1	Q03162	620 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	YDR222W	Q04925	415 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	YDR286C	Q05530	114 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	CRN1	Q06440	651 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	BI2	P03873	423 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	BI4	P03879	638 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	PMA2	P19657	947 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	SRB4	P32569	687 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	GYP6	P32806	458 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	CBR1	P38626	284 aa	Known RBP	5.06	□□□□□ -1.6
DOA1	YKL213C	TDA3	P38758	523 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	PHB1	P40961	287 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	RRP17	Q04031	235 aa	Predicted RBP	5.06	□□□□□ -1.6
DOA1	YKL213C	ARO80	Q04052	950 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	TRE1	Q08919	783 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	PGC1	Q08959	321 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	YOL087C	Q99247	1116 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	BI3	Q9ZZW7	517 aa		5.06	□□□□□ -1.6
DOA1	YKL213C	JIP3	O13555	125 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	ATP1	P07251	545 aa	Known RBP	5.05	□□□□□ -1.6
DOA1	YKL213C	CKI1	P20485	582 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	PEX1	P24004	1043 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	PPZ1	P26570	692 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	YME2	P32843	850 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	MRP4	P32902	394 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	YBR284W	P38150	797 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	YSW1	P38280	609 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	APD1	P38281	316 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	MTW1	P39731	289 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	YEN1	P40028	759 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	SAP185	P40856	1058 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	ASG7	P46993	209 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	VTC4	P47075	721 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	NUP42	P49686	430 aa	Known RBP	5.05	□□□□□ -1.6
DOA1	YKL213C	KAP114	P53067	1004 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	NUT1	P53114	1132 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	BOP3	P53958	396 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	NGL3	Q03210	505 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	YML083C	Q04526	418 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	RSC3	Q06639	885 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	VAC14	Q06708	880 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	YOR378W	Q08902	515 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	TAF10	Q12030	206 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	MNL2	Q12205	849 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	LSO2	Q3E772	92 aa	Known RBP	5.05	□□□□□ -1.6
DOA1	YKL213C	APM4	Q99186	491 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	KGD2	P19262	463 aa	Predicted RBP	5.05	□□□□□ -1.6
DOA1	YKL213C	CDC10	P25342	322 aa	Known RBP	5.05	□□□□□ -1.6
DOA1	YKL213C	LRE1	P25579	583 aa	Known RBP	5.05	□□□□□ -1.6
DOA1	YKL213C	YEL043W	P32618	956 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	TKL2	P33315	681 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	RSM22	P36056	628 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	YBL036C	P38197	257 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	NCL1	P38205	684 aa	Known RBP	5.05	□□□□□ -1.6
DOA1	YKL213C	REI1	P38344	393 aa	Predicted RBP	5.05	□□□□□ -1.6
DOA1	YKL213C	HIS2	P38635	335 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	QNS1	P38795	714 aa	Known RBP	5.05	□□□□□ -1.6
DOA1	YKL213C	RGA1	P39083	1007 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	YCK3	P39962	524 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	YJL045W	P47052	634 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	LSG1	P53145	640 aa	Known RBP	5.05	□□□□□ -1.6
DOA1	YKL213C	UBP2	Q01476	1272 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	SGO1	Q08490	590 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	GPM2	Q12008	311 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	VPS54	Q12071	889 aa		5.05	□□□□□ -1.6
DOA1	YKL213C	NOT5	Q12514	560 aa	Predicted RBP	5.05	□□□□□ -1.6
DOA1	YKL213C	ADE8	P04161	214 aa		5.04	□□□□□ -1.6
DOA1	YKL213C	RPC40	P07703	335 aa	Known RBP	5.04	□□□□□ -1.6
DOA1	YKL213C	TRM1	P15565	570 aa	Known RBP	5.04	□□□□□ -1.6
DOA1	YKL213C	EST1	P17214	699 aa	Predicted RBP	5.04	□□□□□ -1.6
DOA1	YKL213C	GLK1	P17709	500 aa	Known RBP	5.04	□□□□□ -1.6
DOA1	YKL213C	OCA4	P25366	362 aa		5.04	□□□□□ -1.6
DOA1	YKL213C	PEP7	P32609	515 aa		5.04	□□□□□ -1.6
DOA1	YKL213C	ECM4	P36156	370 aa		5.04	□□□□□ -1.6
DOA1	YKL213C	YRO2	P38079	344 aa		5.04	□□□□□ -1.6
DOA1	YKL213C	PCM1	P38628	557 aa	Known RBP	5.04	□□□□□ -1.6
DOA1	YKL213C	PEX28	P38848	579 aa		5.04	□□□□□ -1.6
DOA1	YKL213C	MNN1	P39106	762 aa		5.04	□□□□□ -1.6
DOA1	YKL213C	IES5	P40060	125 aa		5.04	□□□□□ -1.6
DOA1	YKL213C	TGL3	P40308	642 aa		5.04	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms