RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W PHO91P27514 894 aa2.48□□□□□ -2.01
TRA1YHR099W PMT1P33775 817 aa2.48□□□□□ -2.01
TRA1YHR099W MIX23P38162 196 aa2.48□□□□□ -2.01
TRA1YHR099W TGL3P40308 642 aa2.48□□□□□ -2.01
TRA1YHR099W MND2P40577 368 aa2.48□□□□□ -2.01
TRA1YHR099W ISM1P48526 1002 aa2.48□□□□□ -2.01
TRA1YHR099W HCH1P53834 153 aa2.48□□□□□ -2.01
TRA1YHR099W YML119WQ03208 357 aa2.48□□□□□ -2.01
TRA1YHR099W RPN9Q04062 393 aaKnown RBP2.48□□□□□ -2.01
TRA1YHR099W RTT103Q05543 409 aa2.48□□□□□ -2.01
TRA1YHR099W PSR1Q07800 427 aa2.48□□□□□ -2.01
TRA1YHR099W BUD3P25558 1636 aa2.48□□□□□ -2.01
TRA1YHR099W URA3P03962 267 aa2.48□□□□□ -2.01
TRA1YHR099W NAT1P12945 854 aaKnown RBP2.48□□□□□ -2.01
TRA1YHR099W TEC1P18412 486 aa2.48□□□□□ -2.01
TRA1YHR099W RAM1P22007 431 aa2.48□□□□□ -2.01
TRA1YHR099W MRS4P23500 304 aa2.48□□□□□ -2.01
TRA1YHR099W DPB2P24482 689 aaPredicted RBP2.48□□□□□ -2.01
TRA1YHR099W RPS7AP26786 190 aaKnown RBP2.48□□□□□ -2.01
TRA1YHR099W SRB6P32570 121 aa2.48□□□□□ -2.01
TRA1YHR099W YHI9P38765 294 aa2.48□□□□□ -2.01
TRA1YHR099W VAC8P39968 578 aa2.48□□□□□ -2.01
TRA1YHR099W HMF1P40037 129 aaKnown RBP2.48□□□□□ -2.01
TRA1YHR099W RDR1Q08904 546 aa2.48□□□□□ -2.01
TRA1YHR099W FRE3Q08905 711 aa2.48□□□□□ -2.01
TRA1YHR099W COQ4O13525 335 aa2.48□□□□□ -2.01
TRA1YHR099W TRP5P00931 707 aaKnown RBP2.48□□□□□ -2.01
TRA1YHR099W SPS22P25380 463 aa2.48□□□□□ -2.01
TRA1YHR099W RAD14P28519 371 aa2.48□□□□□ -2.01
TRA1YHR099W ULP2P40537 1034 aaPredicted RBP2.48□□□□□ -2.01
TRA1YHR099W CIN1P40987 1014 aa2.48□□□□□ -2.01
TRA1YHR099W CCT8P47079 568 aaKnown RBP2.48□□□□□ -2.01
TRA1YHR099W HLJ1P48353 224 aa2.48□□□□□ -2.01
TRA1YHR099W DUS1P53759 423 aaKnown RBP2.48□□□□□ -2.01
TRA1YHR099W SKY1Q03656 742 aa2.48□□□□□ -2.01
TRA1YHR099W ECM18Q04623 453 aa2.48□□□□□ -2.01
TRA1YHR099W GYP1Q08484 637 aa2.48□□□□□ -2.01
TRA1YHR099W AKR2Q12013 749 aa2.48□□□□□ -2.01
TRA1YHR099W VCX1Q99385 411 aa2.48□□□□□ -2.01
TRA1YHR099W SEC17P32602 292 aa2.48□□□□□ -2.01
TRA1YHR099W CAT2P32796 670 aaKnown RBP2.48□□□□□ -2.01
TRA1YHR099W TDP1P38319 544 aa2.48□□□□□ -2.01
TRA1YHR099W YIL166CP40445 542 aa2.48□□□□□ -2.01
TRA1YHR099W BIR1P47134 954 aa2.48□□□□□ -2.01
TRA1YHR099W RHO4Q00246 291 aa2.48□□□□□ -2.01
TRA1YHR099W ECM38Q05902 660 aaPredicted RBP2.48□□□□□ -2.01
TRA1YHR099W YDL124WQ07551 312 aaKnown RBP2.48□□□□□ -2.01
TRA1YHR099W PGC1Q08959 321 aa2.48□□□□□ -2.01
TRA1YHR099W MCM3P24279 971 aaKnown RBP2.48□□□□□ -2.01
TRA1YHR099W NPA3P47122 385 aa2.48□□□□□ -2.01
TRA1YHR099W GPI8P49018 411 aa2.48□□□□□ -2.01
TRA1YHR099W SCY1P53009 804 aa2.48□□□□□ -2.01
TRA1YHR099W FUS2Q05670 677 aa2.48□□□□□ -2.01
TRA1YHR099W SPH1Q06160 661 aa2.48□□□□□ -2.01
TRA1YHR099W MMR1Q06324 491 aa2.48□□□□□ -2.01
TRA1YHR099W GUP2Q08929 609 aa2.48□□□□□ -2.01
TRA1YHR099W TRS33Q99394 268 aa2.48□□□□□ -2.01
TRA1YHR099W CLB4P24871 460 aa2.47□□□□□ -2.01
TRA1YHR099W PEX3P28795 441 aa2.47□□□□□ -2.01
TRA1YHR099W NAM7P30771 971 aaKnown RBP2.47□□□□□ -2.01
TRA1YHR099W RIM1P32445 135 aaKnown RBP2.47□□□□□ -2.01
TRA1YHR099W SKG6P32900 734 aaPredicted RBP2.47□□□□□ -2.01
TRA1YHR099W DHR2P36009 735 aaPredicted RBP2.47□□□□□ -2.01
TRA1YHR099W YHR219WP38900 624 aa2.47□□□□□ -2.01
TRA1YHR099W YGR012WP53206 393 aa2.47□□□□□ -2.01
TRA1YHR099W YLL058WQ12198 575 aa2.47□□□□□ -2.01
TRA1YHR099W NCA2Q12374 616 aa2.47□□□□□ -2.01
TRA1YHR099W NUP188P52593 1655 aaKnown RBP2.47□□□□□ -2.01
TRA1YHR099W PAB1P04147 577 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
TRA1YHR099W MNE1P24720 663 aa2.47□□□□□ -2.01
TRA1YHR099W PRO1P32264 428 aa2.47□□□□□ -2.01
TRA1YHR099W XDJ1P39102 459 aa2.47□□□□□ -2.01
TRA1YHR099W DIG2Q03373 323 aaKnown RBP2.47□□□□□ -2.01
TRA1YHR099W BUD22Q04347 519 aaKnown RBP2.47□□□□□ -2.01
TRA1YHR099W DNL4Q08387 944 aaPredicted RBP2.47□□□□□ -2.01
TRA1YHR099W RCN2Q12044 265 aa2.47□□□□□ -2.01
TRA1YHR099W ELG1Q12050 791 aa2.47□□□□□ -2.01
TRA1YHR099W GPR1Q12361 961 aa2.47□□□□□ -2.01
TRA1YHR099W ABF1P14164 731 aa2.47□□□□□ -2.01
TRA1YHR099W VMA2P16140 517 aaKnown RBP2.47□□□□□ -2.01
TRA1YHR099W RET1P22276 1149 aaKnown RBP2.47□□□□□ -2.01
TRA1YHR099W YBR242WP38331 238 aa2.47□□□□□ -2.01
TRA1YHR099W CIN4P39110 191 aa2.47□□□□□ -2.01
TRA1YHR099W MMF1P40185 145 aaKnown RBP2.47□□□□□ -2.01
TRA1YHR099W SWP82P43554 623 aa2.47□□□□□ -2.01
TRA1YHR099W ECL1P48235 211 aa2.47□□□□□ -2.01
TRA1YHR099W RPM2Q02773 1202 aa2.47□□□□□ -2.01
TRA1YHR099W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
TRA1YHR099W YMR074CQ04773 145 aa2.47□□□□□ -2.01
TRA1YHR099W YOL131WQ08270 108 aa2.47□□□□□ -2.01
TRA1YHR099W MED7Q08278 222 aa2.47□□□□□ -2.01
TRA1YHR099W HOS1Q12214 470 aa2.47□□□□□ -2.01
TRA1YHR099W YCT1Q12235 531 aa2.47□□□□□ -2.01
TRA1YHR099W ERG12P07277 443 aa2.47□□□□□ -2.01
TRA1YHR099W APN1P22936 367 aa2.47□□□□□ -2.01
TRA1YHR099W YIH1P25637 258 aa2.47□□□□□ -2.01
TRA1YHR099W DAL80P26343 269 aa2.47□□□□□ -2.01
TRA1YHR099W IRE1P32361 1115 aa2.47□□□□□ -2.01
TRA1YHR099W SRP68P38687 599 aaKnown RBP2.47□□□□□ -2.01
TRA1YHR099W ADO1P47143 340 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms