RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W NRD1P53617 575 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
BCD1YHR040W TOF1P53840 1238 aa3.67□□□□□ -1.82
BCD1YHR040W CUR1Q06469 252 aa3.67□□□□□ -1.82
BCD1YHR040W TSR2Q06672 205 aaKnown RBP3.67□□□□□ -1.82
BCD1YHR040W APL4Q12028 832 aa3.67□□□□□ -1.82
BCD1YHR040W RUD3Q12234 484 aaKnown RBP3.67□□□□□ -1.82
BCD1YHR040W ILV1P00927 576 aaKnown RBP3.66□□□□□ -1.82
BCD1YHR040W RPL11AP0C0W9 174 aaKnown RBP3.66□□□□□ -1.82
BCD1YHR040W APA1P16550 321 aaKnown RBP3.66□□□□□ -1.82
BCD1YHR040W PHO81P17442 1178 aa3.66□□□□□ -1.82
BCD1YHR040W ACE2P21192 770 aa3.66□□□□□ -1.82
BCD1YHR040W ISY1P21374 235 aaPredicted RBP3.66□□□□□ -1.82
BCD1YHR040W PER1P25625 357 aa3.66□□□□□ -1.82
BCD1YHR040W HXT1P32465 570 aa3.66□□□□□ -1.82
BCD1YHR040W CDC12P32468 407 aaKnown RBP3.66□□□□□ -1.82
BCD1YHR040W HOG1P32485 435 aa3.66□□□□□ -1.82
BCD1YHR040W UBC6P33296 250 aaPredicted RBP3.66□□□□□ -1.82
BCD1YHR040W NIP100P33420 868 aa3.66□□□□□ -1.82
BCD1YHR040W EMC3P36039 253 aa3.66□□□□□ -1.82
BCD1YHR040W YRO2P38079 344 aa3.66□□□□□ -1.82
BCD1YHR040W PCH2P38126 564 aa3.66□□□□□ -1.82
BCD1YHR040W KTR4P38131 464 aa3.66□□□□□ -1.82
BCD1YHR040W UBP13P38187 747 aa3.66□□□□□ -1.82
BCD1YHR040W SUL1P38359 859 aa3.66□□□□□ -1.82
BCD1YHR040W SIP3P38717 1229 aa3.66□□□□□ -1.82
BCD1YHR040W GAA1P39012 614 aa3.66□□□□□ -1.82
BCD1YHR040W SPC72P39723 622 aa3.66□□□□□ -1.82
BCD1YHR040W VAB2P40003 282 aa3.66□□□□□ -1.82
BCD1YHR040W EFM4P40516 257 aa3.66□□□□□ -1.82
BCD1YHR040W HIS6P40545 261 aa3.66□□□□□ -1.82
BCD1YHR040W MNT3P40549 630 aa3.66□□□□□ -1.82
BCD1YHR040W GYP8P43570 497 aa3.66□□□□□ -1.82
BCD1YHR040W EAF6P47128 113 aa3.66□□□□□ -1.82
BCD1YHR040W FMS1P50264 508 aa3.66□□□□□ -1.82
BCD1YHR040W LIF1P53150 421 aa3.66□□□□□ -1.82
BCD1YHR040W DAM1P53267 343 aa3.66□□□□□ -1.82
BCD1YHR040W SRP1Q02821 542 aaKnown RBP3.66□□□□□ -1.82
BCD1YHR040W ATG33Q06485 197 aa3.66□□□□□ -1.82
BCD1YHR040W RSC3Q06639 885 aa3.66□□□□□ -1.82
BCD1YHR040W OMS1Q06668 471 aa3.66□□□□□ -1.82
BCD1YHR040W ATG23Q06671 453 aa3.66□□□□□ -1.82
BCD1YHR040W RCL1Q08096 367 aaPredicted RBP3.66□□□□□ -1.82
BCD1YHR040W PEX15Q08215 383 aa3.66□□□□□ -1.82
BCD1YHR040W NUR1Q12066 484 aa3.66□□□□□ -1.82
BCD1YHR040W RIO1Q12196 484 aaKnown RBP3.66□□□□□ -1.82
BCD1YHR040W HIF1Q12373 385 aa3.66□□□□□ -1.82
BCD1YHR040W RPL11BQ3E757 174 aaPredicted RBP3.66□□□□□ -1.82
BCD1YHR040W YOL087CQ99247 1116 aa3.66□□□□□ -1.82
BCD1YHR040W PGK1P00560 416 aaKnown RBP3.65□□□□□ -1.83
BCD1YHR040W SNF1P06782 633 aaKnown RBP3.65□□□□□ -1.83
BCD1YHR040W YEL076C-AP0CX16 216 aa3.65□□□□□ -1.83
BCD1YHR040W YLR464WP0CX17 216 aa3.65□□□□□ -1.83
BCD1YHR040W TCP1P12612 559 aaKnown RBP3.65□□□□□ -1.83
BCD1YHR040W HMG1P12683 1054 aa3.65□□□□□ -1.83
BCD1YHR040W ENA1P13587 1091 aa3.65□□□□□ -1.83
BCD1YHR040W PFK1P16861 987 aaKnown RBP3.65□□□□□ -1.83
BCD1YHR040W SNF5P18480 905 aa3.65□□□□□ -1.83
BCD1YHR040W MCM10P32354 571 aa3.65□□□□□ -1.83
BCD1YHR040W AFR1P33304 620 aa3.65□□□□□ -1.83
BCD1YHR040W REC104P33323 182 aa3.65□□□□□ -1.83
BCD1YHR040W MCD4P36051 919 aa3.65□□□□□ -1.83
BCD1YHR040W RRN3P36070 627 aa3.65□□□□□ -1.83
BCD1YHR040W PPS1P38148 807 aa3.65□□□□□ -1.83
BCD1YHR040W TDA3P38758 523 aa3.65□□□□□ -1.83
BCD1YHR040W RTT107P38850 1070 aa3.65□□□□□ -1.83
BCD1YHR040W YMR124WP39523 943 aaKnown RBP3.65□□□□□ -1.83
BCD1YHR040W TIF4631P39935 952 aaKnown RBP3.65□□□□□ -1.83
BCD1YHR040W YEL076CP39971 216 aa3.65□□□□□ -1.83
BCD1YHR040W MXR1P40029 184 aa3.65□□□□□ -1.83
BCD1YHR040W HMF1P40037 129 aaKnown RBP3.65□□□□□ -1.83
BCD1YHR040W TOK1P40310 691 aa3.65□□□□□ -1.83
BCD1YHR040W TOS3P43637 560 aa3.65□□□□□ -1.83
BCD1YHR040W IML2P47031 731 aa3.65□□□□□ -1.83
BCD1YHR040W CCM1P48237 864 aaPredicted RBP3.65□□□□□ -1.83
BCD1YHR040W SLD3P53135 668 aa3.65□□□□□ -1.83
BCD1YHR040W ZPR1P53303 486 aaKnown RBP3.65□□□□□ -1.83
BCD1YHR040W PGA2P53903 129 aa3.65□□□□□ -1.83
BCD1YHR040W ENA2Q01896 1091 aa3.65□□□□□ -1.83
BCD1YHR040W KIN4Q01919 800 aa3.65□□□□□ -1.83
BCD1YHR040W TRM44Q02648 567 aaKnown RBP3.65□□□□□ -1.83
BCD1YHR040W SPC19Q03954 165 aa3.65□□□□□ -1.83
BCD1YHR040W AIM33Q04516 312 aa3.65□□□□□ -1.83
BCD1YHR040W ERV41Q04651 352 aa3.65□□□□□ -1.83
BCD1YHR040W ADY4Q05955 493 aa3.65□□□□□ -1.83
BCD1YHR040W RLP24Q07915 199 aaKnown RBP3.65□□□□□ -1.83
BCD1YHR040W TCO89Q08921 799 aa3.65□□□□□ -1.83
BCD1YHR040W GUP2Q08929 609 aa3.65□□□□□ -1.83
BCD1YHR040W APL5Q08951 932 aaKnown RBP3.65□□□□□ -1.83
BCD1YHR040W ZRT2Q12436 422 aa3.65□□□□□ -1.83
BCD1YHR040W ENA5Q12691 1091 aa3.65□□□□□ -1.83
BCD1YHR040W FAS2P19097 1887 aaKnown RBP3.64□□□□□ -1.83
BCD1YHR040W PPR1P07272 904 aaPredicted RBP3.64□□□□□ -1.83
BCD1YHR040W MSS18P08593 268 aa3.64□□□□□ -1.83
BCD1YHR040W CLN3P13365 580 aa3.64□□□□□ -1.83
BCD1YHR040W SPO12P17123 173 aa3.64□□□□□ -1.83
BCD1YHR040W SAM2P19358 384 aaKnown RBP3.64□□□□□ -1.83
BCD1YHR040W COX11P19516 300 aaKnown RBP3.64□□□□□ -1.83
BCD1YHR040W SEC21P32074 935 aaKnown RBP3.64□□□□□ -1.83
BCD1YHR040W DAL3P32459 195 aa3.64□□□□□ -1.83
BCD1YHR040W ATG19P35193 415 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms