RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W RPL7AP05737 244 aaKnown RBP2.99□□□□□ -1.93
NIC96YFR002W NUP1P20676 1076 aa2.99□□□□□ -1.93
NIC96YFR002W DUG1P43616 481 aaKnown RBP2.99□□□□□ -1.93
NIC96YFR002W RNR4P49723 345 aaKnown RBP2.99□□□□□ -1.93
NIC96YFR002W COQ6P53318 479 aa2.99□□□□□ -1.93
NIC96YFR002W USA1Q03714 838 aa2.99□□□□□ -1.93
NIC96YFR002W YPL216WQ08964 1102 aa2.99□□□□□ -1.93
NIC96YFR002W RPL7BQ12213 244 aaKnown RBP2.99□□□□□ -1.93
NIC96YFR002W TOP2P06786 1428 aaKnown RBP2.99□□□□□ -1.93
NIC96YFR002W YPT10P38146 199 aa2.99□□□□□ -1.93
NIC96YFR002W IRC5P43610 853 aa2.99□□□□□ -1.93
NIC96YFR002W SKY1Q03656 742 aa2.99□□□□□ -1.93
NIC96YFR002W YPR027CQ12079 277 aa2.99□□□□□ -1.93
NIC96YFR002W APN1P22936 367 aa2.98□□□□□ -1.93
NIC96YFR002W CAP1P28495 268 aaKnown RBP2.98□□□□□ -1.93
NIC96YFR002W EUG1P32474 517 aa2.98□□□□□ -1.93
NIC96YFR002W NIT2P47016 307 aa2.98□□□□□ -1.93
NIC96YFR002W PEF1P53238 335 aa2.98□□□□□ -1.93
NIC96YFR002W YDL073WQ07454 984 aa2.98□□□□□ -1.93
NIC96YFR002W RMP1Q12530 201 aa2.98□□□□□ -1.93
NIC96YFR002W ULS1Q08562 1619 aa2.98□□□□□ -1.93
NIC96YFR002W SAP4P53036 818 aa2.98□□□□□ -1.93
NIC96YFR002W WHI2P12611 486 aa2.97□□□□□ -1.93
NIC96YFR002W VPS33P20795 691 aa2.97□□□□□ -1.93
NIC96YFR002W SRP68P38687 599 aaKnown RBP2.97□□□□□ -1.93
NIC96YFR002W YJL193WP39542 402 aa2.97□□□□□ -1.93
NIC96YFR002W LTP1P40347 161 aa2.97□□□□□ -1.93
NIC96YFR002W YGL081WP53156 320 aa2.97□□□□□ -1.93
NIC96YFR002W TUF1P02992 437 aaKnown RBP2.97□□□□□ -1.93
NIC96YFR002W AQY1P0CD91 305 aa2.97□□□□□ -1.93
NIC96YFR002W YEL076C-AP0CX16 216 aa2.97□□□□□ -1.93
NIC96YFR002W YLR464WP0CX17 216 aa2.97□□□□□ -1.93
NIC96YFR002W RNR3P21672 869 aaKnown RBP2.97□□□□□ -1.93
NIC96YFR002W BRN1P38170 754 aa2.97□□□□□ -1.93
NIC96YFR002W YEL076CP39971 216 aa2.97□□□□□ -1.93
NIC96YFR002W XBP1P40489 647 aa2.97□□□□□ -1.93
NIC96YFR002W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
NIC96YFR002W FRE7Q12333 620 aa2.97□□□□□ -1.93
NIC96YFR002W ICT1Q12385 394 aa2.97□□□□□ -1.93
NIC96YFR002W SEC3P33332 1336 aaKnown RBP2.97□□□□□ -1.93
NIC96YFR002W GDB1Q06625 1536 aa2.97□□□□□ -1.93
NIC96YFR002W CHC1P22137 1653 aaKnown RBP2.97□□□□□ -1.93
NIC96YFR002W TMT1P32643 299 aa2.96□□□□□ -1.93
NIC96YFR002W CCL1P37366 393 aa2.96□□□□□ -1.93
NIC96YFR002W YEN1P40028 759 aa2.96□□□□□ -1.93
NIC96YFR002W YFL015CP43578 164 aa2.96□□□□□ -1.93
NIC96YFR002W SQS1P53866 767 aaKnown RBP2.96□□□□□ -1.93
NIC96YFR002W LOT5P34234 306 aa2.96□□□□□ -1.94
NIC96YFR002W EAF5P39995 279 aa2.96□□□□□ -1.94
NIC96YFR002W PEA2P40091 420 aa2.96□□□□□ -1.94
NIC96YFR002W YOR378WQ08902 515 aa2.96□□□□□ -1.94
NIC96YFR002W PCL8Q08966 492 aa2.96□□□□□ -1.94
NIC96YFR002W TGS1Q12052 315 aa2.96□□□□□ -1.94
NIC96YFR002W VPS5Q92331 675 aa2.96□□□□□ -1.94
NIC96YFR002W HEM1P09950 548 aaPredicted RBP2.95□□□□□ -1.94
NIC96YFR002W AEP2P22136 580 aa2.95□□□□□ -1.94
NIC96YFR002W GRX4P32642 244 aa2.95□□□□□ -1.94
NIC96YFR002W EXO1P39875 702 aa2.95□□□□□ -1.94
NIC96YFR002W MNT2P53059 558 aa2.95□□□□□ -1.94
NIC96YFR002W MTD1Q02046 320 aaKnown RBP2.95□□□□□ -1.94
NIC96YFR002W TY1B-JR2P47100 1755 aaKnown RBP2.95□□□□□ -1.94
NIC96YFR002W TY1B-ER2Q03619 1755 aa2.95□□□□□ -1.94
NIC96YFR002W TY1B-MR1Q04214 1755 aa2.95□□□□□ -1.94
NIC96YFR002W TY1B-MR2Q04670 1755 aaKnown RBP2.95□□□□□ -1.94
NIC96YFR002W TY1B-LR1Q12088 1755 aaKnown RBP2.95□□□□□ -1.94
NIC96YFR002W TY1B-NL1Q12112 1755 aa2.95□□□□□ -1.94
NIC96YFR002W TY1B-GR1Q12141 1755 aa2.95□□□□□ -1.94
NIC96YFR002W TY1B-BLQ12490 1755 aa2.95□□□□□ -1.94
NIC96YFR002W TY1B-DR3Q99231 1755 aa2.95□□□□□ -1.94
NIC96YFR002W PDR12Q02785 1511 aa2.95□□□□□ -1.94
NIC96YFR002W PCK1P10963 549 aa2.95□□□□□ -1.94
NIC96YFR002W NET1P47035 1189 aa2.95□□□□□ -1.94
NIC96YFR002W YAP7Q08182 245 aa2.95□□□□□ -1.94
NIC96YFR002W MYO4P32492 1471 aa2.95□□□□□ -1.94
NIC96YFR002W EDE1P34216 1381 aa2.95□□□□□ -1.94
NIC96YFR002W COX11P19516 300 aaKnown RBP2.94□□□□□ -1.94
NIC96YFR002W CWH43P25618 953 aa2.94□□□□□ -1.94
NIC96YFR002W DSS4P32601 143 aa2.94□□□□□ -1.94
NIC96YFR002W RPC34P32910 317 aa2.94□□□□□ -1.94
NIC96YFR002W YBR071WP38243 211 aa2.94□□□□□ -1.94
NIC96YFR002W YJR120WP47157 116 aa2.94□□□□□ -1.94
NIC96YFR002W GLO1P50107 326 aa2.94□□□□□ -1.94
NIC96YFR002W CWC2Q12046 339 aaPredicted RBP2.94□□□□□ -1.94
NIC96YFR002W ARG1P22768 420 aa2.94□□□□□ -1.94
NIC96YFR002W PTP1P25044 335 aa2.94□□□□□ -1.94
NIC96YFR002W HEM12P32347 362 aaPredicted RBP2.94□□□□□ -1.94
NIC96YFR002W ENP1P38333 483 aaKnown RBP2.94□□□□□ -1.94
NIC96YFR002W TDA10P42938 290 aa2.94□□□□□ -1.94
NIC96YFR002W BST1P43571 1029 aa2.94□□□□□ -1.94
NIC96YFR002W ATP23P53722 227 aa2.94□□□□□ -1.94
NIC96YFR002W ECM38Q05902 660 aaPredicted RBP2.94□□□□□ -1.94
NIC96YFR002W TRE2Q08693 809 aa2.94□□□□□ -1.94
NIC96YFR002W RTK1Q12100 620 aaPredicted RBP2.94□□□□□ -1.94
NIC96YFR002W TMA17Q12513 150 aa2.94□□□□□ -1.94
NIC96YFR002W YMR084WA2P2R3 262 aa2.93□□□□□ -1.94
NIC96YFR002W ULP2P40537 1034 aaPredicted RBP2.93□□□□□ -1.94
NIC96YFR002W YJL043WP47053 257 aa2.93□□□□□ -1.94
NIC96YFR002W SPC105P53148 917 aa2.93□□□□□ -1.94
NIC96YFR002W YNL092WP53934 400 aa2.93□□□□□ -1.94
NIC96YFR002W GFD1Q04839 188 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms