RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W TUP1P16649 713 aa5.53□□□□□ -1.52
UBC6YER100W FUR1P18562 216 aaKnown RBP5.53□□□□□ -1.52
UBC6YER100W SWI3P32591 825 aa5.53□□□□□ -1.52
UBC6YER100W TOA1P32773 286 aa5.53□□□□□ -1.52
UBC6YER100W COS111P38308 924 aa5.53□□□□□ -1.52
UBC6YER100W NPR2P39923 615 aa5.53□□□□□ -1.52
UBC6YER100W TPA1P40032 644 aaKnown RBP5.53□□□□□ -1.52
UBC6YER100W LRO1P40345 661 aa5.53□□□□□ -1.52
UBC6YER100W ARF3P40994 183 aaRIP-Chip data5.53□□□□□ -1.52not detected
UBC6YER100W LSB3P43603 459 aaKnown RBP5.53□□□□□ -1.52
UBC6YER100W ARE2P53629 642 aaKnown RBP5.53□□□□□ -1.52
UBC6YER100W YPL108WQ02872 168 aaPredicted RBP5.53□□□□□ -1.52
UBC6YER100W ARR3Q06598 404 aa5.53□□□□□ -1.52
UBC6YER100W YFT2Q06676 274 aa5.53□□□□□ -1.52
UBC6YER100W ICL2Q12031 575 aa5.53□□□□□ -1.52
UBC6YER100W SUL2Q12325 893 aa5.53□□□□□ -1.52
UBC6YER100W PCD1Q12524 340 aa5.53□□□□□ -1.52
UBC6YER100W PET122P10355 254 aa5.52□□□□□ -1.53
UBC6YER100W CDC24P11433 854 aaPredicted RBP5.52□□□□□ -1.53
UBC6YER100W SPO16P17122 198 aa5.52□□□□□ -1.53
UBC6YER100W OPI1P21957 404 aa5.52□□□□□ -1.53
UBC6YER100W VPS34P22543 875 aa5.52□□□□□ -1.53
UBC6YER100W PRP28P23394 588 aa5.52□□□□□ -1.53
UBC6YER100W KAR4P25583 335 aa5.52□□□□□ -1.53
UBC6YER100W FEN2P25621 512 aaKnown RBP5.52□□□□□ -1.53
UBC6YER100W CDC20P26309 610 aa5.52□□□□□ -1.53
UBC6YER100W SWC3P31376 625 aa5.52□□□□□ -1.53
UBC6YER100W YJL193WP39542 402 aa5.52□□□□□ -1.53
UBC6YER100W YIR042CP40586 236 aa5.52□□□□□ -1.53
UBC6YER100W LYS14P40971 790 aa5.52□□□□□ -1.53
UBC6YER100W AMA1P50082 593 aa5.52□□□□□ -1.53
UBC6YER100W YML6P51998 286 aa5.52□□□□□ -1.53
UBC6YER100W VPS4P52917 437 aa5.52□□□□□ -1.53
UBC6YER100W MTL1P53214 551 aa5.52□□□□□ -1.53
UBC6YER100W RSC1P53236 928 aa5.52□□□□□ -1.53
UBC6YER100W CLU1Q03690 1277 aaKnown RBP5.52□□□□□ -1.53
UBC6YER100W YAP6Q03935 383 aa5.52□□□□□ -1.53
UBC6YER100W SYF1Q04048 859 aaPredicted RBP5.52□□□□□ -1.53
UBC6YER100W MFB1Q04922 465 aa5.52□□□□□ -1.53
UBC6YER100W UTP21Q06078 939 aaPredicted RBP5.52□□□□□ -1.53
UBC6YER100W MED7Q08278 222 aa5.52□□□□□ -1.53
UBC6YER100W ENB1Q08299 606 aa5.52□□□□□ -1.53
UBC6YER100W YLR302CO13544 120 aa5.51□□□□□ -1.53
UBC6YER100W TRP3P00937 484 aa5.51□□□□□ -1.53
UBC6YER100W TY2A-LR1P0C2J4 438 aa5.51□□□□□ -1.53
UBC6YER100W TY2A-FP0CX61 438 aa5.51□□□□□ -1.53
UBC6YER100W TY2A-GR2P0CX62 438 aa5.51□□□□□ -1.53
UBC6YER100W CKA1P15790 372 aa5.51□□□□□ -1.53
UBC6YER100W TY2A-CP25383 438 aa5.51□□□□□ -1.53
UBC6YER100W YCR015CP25616 317 aa5.51□□□□□ -1.53
UBC6YER100W RPS7AP26786 190 aaKnown RBP5.51□□□□□ -1.53
UBC6YER100W MRP20P32387 263 aa5.51□□□□□ -1.53
UBC6YER100W VMA8P32610 256 aaKnown RBP5.51□□□□□ -1.53
UBC6YER100W PXA2P34230 853 aa5.51□□□□□ -1.53
UBC6YER100W EHT1P38295 451 aa5.51□□□□□ -1.53
UBC6YER100W NUP60P39705 539 aa5.51□□□□□ -1.53
UBC6YER100W PIG2P40187 538 aa5.51□□□□□ -1.53
UBC6YER100W YIL077CP40508 320 aa5.51□□□□□ -1.53
UBC6YER100W GPD2P41911 440 aaKnown RBP5.51□□□□□ -1.53
UBC6YER100W COG1P53079 417 aa5.51□□□□□ -1.53
UBC6YER100W DUO1P53168 247 aaKnown RBP5.51□□□□□ -1.53
UBC6YER100W TY2A-DR2Q03483 438 aa5.51□□□□□ -1.53
UBC6YER100W RCF1Q03713 159 aa5.51□□□□□ -1.53
UBC6YER100W NMD4Q12129 218 aa5.51□□□□□ -1.53
UBC6YER100W RRG1Q12167 365 aaPredicted RBP5.51□□□□□ -1.53
UBC6YER100W TY2A-BQ12260 438 aa5.51□□□□□ -1.53
UBC6YER100W TY2A-OR2Q12293 438 aa5.51□□□□□ -1.53
UBC6YER100W TY2A-DR1Q12392 438 aa5.51□□□□□ -1.53
UBC6YER100W TY2A-OR1Q12439 438 aa5.51□□□□□ -1.53
UBC6YER100W PGA3Q12746 312 aaKnown RBP5.51□□□□□ -1.53
UBC6YER100W TY2A-DR3Q99303 438 aa5.51□□□□□ -1.53
UBC6YER100W TUB2P02557 457 aaKnown RBP5.5□□□□□ -1.53
UBC6YER100W BCS1P32839 456 aa5.5□□□□□ -1.53
UBC6YER100W PLB1P39105 664 aa5.5□□□□□ -1.53
UBC6YER100W FLC2P39719 783 aa5.5□□□□□ -1.53
UBC6YER100W YEL025CP39991 1188 aa5.5□□□□□ -1.53
UBC6YER100W FMP10P40098 244 aa5.5□□□□□ -1.53
UBC6YER100W AXL1P40851 1208 aa5.5□□□□□ -1.53
UBC6YER100W CIR1P42940 261 aa5.5□□□□□ -1.53
UBC6YER100W CTH1P47976 325 aa5.5□□□□□ -1.53
UBC6YER100W COS12P53053 380 aa5.5□□□□□ -1.53
UBC6YER100W YSA1Q01976 231 aa5.5□□□□□ -1.53
UBC6YER100W YLR224WQ05947 369 aa5.5□□□□□ -1.53
UBC6YER100W HUA2Q12134 243 aa5.5□□□□□ -1.53
UBC6YER100W SEC53P07283 254 aaKnown RBP5.49□□□□□ -1.53
UBC6YER100W RED1P14291 827 aa5.49□□□□□ -1.53
UBC6YER100W ERG3P32353 365 aa5.49□□□□□ -1.53
UBC6YER100W YKR073CP36153 106 aa5.49□□□□□ -1.53
UBC6YER100W TDP1P38319 544 aa5.49□□□□□ -1.53
UBC6YER100W FMO1P38866 432 aa5.49□□□□□ -1.53
UBC6YER100W FKH2P41813 862 aa5.49□□□□□ -1.53
UBC6YER100W AAD10P47182 288 aa5.49□□□□□ -1.53
UBC6YER100W ASE1P50275 885 aa5.49□□□□□ -1.53
UBC6YER100W VPS75P53853 264 aa5.49□□□□□ -1.53
UBC6YER100W MRPL22P53881 309 aa5.49□□□□□ -1.53
UBC6YER100W CHS5Q12114 671 aaKnown RBP5.49□□□□□ -1.53
UBC6YER100W PUS1Q12211 544 aaKnown RBP5.49□□□□□ -1.53
UBC6YER100W NOP58Q12499 511 aaKnown RBP5.49□□□□□ -1.53
UBC6YER100W YBR126W-AQ8TGU7 68 aa5.49□□□□□ -1.53
UBC6YER100W RPC53P25441 422 aa5.48□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms