RNA–Protein interactions for RNA: YDR479C

PEX29, Transcript of Peroxisomal integral membrane peroxin, yeast

Gene PEX29, Length 1,665 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX29	YDR479C	PRP40	P33203	583 aa	Known RBP	4.85	□□□□□ -1.63
PEX29	YDR479C	TRM2	P33753	639 aa		4.85	□□□□□ -1.63
PEX29	YDR479C	MNN2	P38069	597 aa		4.85	□□□□□ -1.63
PEX29	YDR479C	PDX3	P38075	228 aa	Known RBP	4.85	□□□□□ -1.63
PEX29	YDR479C	YBP1	P38315	674 aa		4.85	□□□□□ -1.63
PEX29	YDR479C	MMS21	P38632	267 aa		4.85	□□□□□ -1.63
PEX29	YDR479C	APM2	P38700	605 aa		4.85	□□□□□ -1.63
PEX29	YDR479C	YHL049C	P38722	271 aa		4.85	□□□□□ -1.63
PEX29	YDR479C	YEL075C	P39972	122 aa		4.85	□□□□□ -1.63
PEX29	YDR479C	YER189W	P40104	122 aa		4.85	□□□□□ -1.63
PEX29	YDR479C	NTA1	P40354	457 aa		4.85	□□□□□ -1.63
PEX29	YDR479C	MAM33	P40513	266 aa		4.85	□□□□□ -1.63
PEX29	YDR479C	YFL064C	P43540	174 aa		4.85	□□□□□ -1.63
PEX29	YDR479C	TY4A-J	P47023	414 aa		4.85	□□□□□ -1.63
PEX29	YDR479C	YNR029C	P53729	429 aa	Known RBP	4.85	□□□□□ -1.63
PEX29	YDR479C	GDE1	Q02979	1223 aa		4.85	□□□□□ -1.63
PEX29	YDR479C	FCP1	Q03254	732 aa		4.85	□□□□□ -1.63
PEX29	YDR479C	YDR476C	Q03362	224 aa		4.85	□□□□□ -1.63
PEX29	YDR479C	YMR265C	Q03508	461 aa	Known RBP	4.85	□□□□□ -1.63
PEX29	YDR479C	SSQ1	Q05931	657 aa	Predicted RBP	4.85	□□□□□ -1.63
PEX29	YDR479C	TOS4	Q06266	489 aa		4.85	□□□□□ -1.63
PEX29	YDR479C	EMG1	Q06287	252 aa	Known RBP	4.85	□□□□□ -1.63
PEX29	YDR479C	TFC6	Q06339	672 aa		4.85	□□□□□ -1.63
PEX29	YDR479C	YPR172W	Q06608	200 aa		4.85	□□□□□ -1.63
PEX29	YDR479C	PPM2	Q08282	695 aa		4.85	□□□□□ -1.63
PEX29	YDR479C	LSO2	Q3E772	92 aa	Known RBP	4.85	□□□□□ -1.63
PEX29	YDR479C	YBL111C	Q3E7Y5	667 aa		4.85	□□□□□ -1.63
PEX29	YDR479C	DBP5	P20449	482 aa	Known RBP	4.84	□□□□□ -1.63
PEX29	YDR479C	RRT12	P25381	491 aa		4.84	□□□□□ -1.63
PEX29	YDR479C	HEM3	P28789	327 aa		4.84	□□□□□ -1.63
PEX29	YDR479C	APL2	P36000	726 aa	Predicted RBP	4.84	□□□□□ -1.63
PEX29	YDR479C	NTR2	P36118	322 aa	Predicted RBP	4.84	□□□□□ -1.63
PEX29	YDR479C	YBR138C	P38277	524 aa		4.84	□□□□□ -1.63
PEX29	YDR479C	APD1	P38281	316 aa		4.84	□□□□□ -1.63
PEX29	YDR479C	TSC10	P38342	320 aa		4.84	□□□□□ -1.63
PEX29	YDR479C	PFK26	P40433	827 aa	Known RBP	4.84	□□□□□ -1.63
PEX29	YDR479C	ULP2	P40537	1034 aa	Predicted RBP	4.84	□□□□□ -1.63
PEX29	YDR479C	GCD10	P41814	478 aa		4.84	□□□□□ -1.63
PEX29	YDR479C	FMP32	P43557	207 aa		4.84	□□□□□ -1.63
PEX29	YDR479C	TRF5	P48561	642 aa	Known RBP	4.84	□□□□□ -1.63
PEX29	YDR479C	PSP1	P50896	841 aa	Known RBP	4.84	□□□□□ -1.63
PEX29	YDR479C	UBA2	P52488	636 aa		4.84	□□□□□ -1.63
PEX29	YDR479C	RMR1	P53060	241 aa		4.84	□□□□□ -1.63
PEX29	YDR479C	RBG2	P53295	368 aa	Known RBP	4.84	□□□□□ -1.63
PEX29	YDR479C	YNL058C	P53947	316 aa		4.84	□□□□□ -1.63
PEX29	YDR479C	SED5	Q01590	340 aa		4.84	□□□□□ -1.63
PEX29	YDR479C	MEC3	Q02574	474 aa		4.84	□□□□□ -1.63
PEX29	YDR479C	MTG1	Q03151	367 aa	Predicted RBP	4.84	□□□□□ -1.63
PEX29	YDR479C	ABZ2	Q03266	374 aa		4.84	□□□□□ -1.63
PEX29	YDR479C	CEF1	Q03654	590 aa	Predicted RBP	4.84	□□□□□ -1.63
PEX29	YDR479C	COX20	Q04935	205 aa		4.84	□□□□□ -1.63
PEX29	YDR479C	BCP1	Q06338	283 aa		4.84	□□□□□ -1.63
PEX29	YDR479C	SYT1	Q06836	1226 aa		4.84	□□□□□ -1.63
PEX29	YDR479C	SYO1	Q07395	620 aa		4.84	□□□□□ -1.63
PEX29	YDR479C	PEX15	Q08215	383 aa		4.84	□□□□□ -1.63
PEX29	YDR479C	DIA2	Q08496	732 aa	Predicted RBP	4.84	□□□□□ -1.63
PEX29	YDR479C	THI72	Q08579	599 aa		4.84	□□□□□ -1.63
PEX29	YDR479C	SNX3	Q08826	162 aa	Known RBP	4.84	□□□□□ -1.63
PEX29	YDR479C	ATG29	Q12092	213 aa		4.84	□□□□□ -1.63
PEX29	YDR479C	SNU66	Q12420	587 aa	Predicted RBP	4.84	□□□□□ -1.63
PEX29	YDR479C	CEX1	Q12453	761 aa		4.84	□□□□□ -1.63
PEX29	YDR479C	CHO2	P05374	869 aa	Known RBP	4.83	□□□□□ -1.64
PEX29	YDR479C	RPL6B	P05739	176 aa	Known RBP	4.83	□□□□□ -1.64
PEX29	YDR479C	HEM15	P16622	393 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	COQ1	P18900	473 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	PEX5	P35056	612 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	CUE2	P36075	443 aa	Known RBP	4.83	□□□□□ -1.64
PEX29	YDR479C	TRZ1	P36159	838 aa	Predicted RBP	4.83	□□□□□ -1.64
PEX29	YDR479C	VHC1	P38329	1120 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	GDH3	P39708	457 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	STL1	P39932	569 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	RPH1	P39956	796 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	PSY2	P40164	858 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	PRK1	P40494	810 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	SDS3	P40505	327 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	SER33	P40510	469 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	IRC5	P43610	853 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	MET12	P46151	657 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	SNX4	P47057	423 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	CWC25	P53854	179 aa	Known RBP	4.83	□□□□□ -1.64
PEX29	YDR479C	DAK1	P54838	584 aa	Known RBP	4.83	□□□□□ -1.64
PEX29	YDR479C	RPL22B	P56628	122 aa	Known RBP	4.83	□□□□□ -1.64
PEX29	YDR479C	ULP1	Q02724	621 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	BUD22	Q04347	519 aa	Known RBP	4.83	□□□□□ -1.64
PEX29	YDR479C	YDR278C	Q05612	105 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	RGC1	Q06108	1083 aa	Known RBP	4.83	□□□□□ -1.64
PEX29	YDR479C	YDL073W	Q07454	984 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	VHS3	Q08438	674 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	OXR1	Q08952	273 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	YPR202W	Q08993	238 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	NOT5	Q12514	560 aa	Predicted RBP	4.83	□□□□□ -1.64
PEX29	YDR479C	MRP10	O75012	95 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	COB	P00163	385 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	MF(ALPHA)1	P01149	165 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	THS1	P04801	734 aa	Known RBP	4.83	□□□□□ -1.64
PEX29	YDR479C	COR1	P07256	457 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	HMG1	P12683	1054 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	IDI1	P15496	288 aa		4.83	□□□□□ -1.64
PEX29	YDR479C	PDC5	P16467	563 aa	Known RBP	4.83	□□□□□ -1.64
PEX29	YDR479C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms