RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	PIG1	Q06216	648 aa		7.49	□□□□□ -1.21
SKP1	YDR328C	IMA2	Q08295	589 aa		7.49	□□□□□ -1.21
SKP1	YDR328C	NRT1	Q08485	598 aa		7.49	□□□□□ -1.21
SKP1	YDR328C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	7.49	□□□□□ -1.21	not detected
SKP1	YDR328C	LPX1	Q12405	387 aa	Known RBP	7.49	□□□□□ -1.21
SKP1	YDR328C	EFG1	Q3E705	233 aa	Known RBP	7.49	□□□□□ -1.21
SKP1	YDR328C	SEY1	Q99287	776 aa		7.49	□□□□□ -1.21
SKP1	YDR328C	AI5_ALPHA	Q9ZZX1	630 aa		7.49	□□□□□ -1.21
SKP1	YDR328C	QCR6	P00127	147 aa		7.48	□□□□□ -1.21
SKP1	YDR328C	HIS1	P00498	297 aa	Known RBP	7.48	□□□□□ -1.21
SKP1	YDR328C	RAD1	P06777	1100 aa		7.48	□□□□□ -1.21
SKP1	YDR328C	HMG2	P12684	1045 aa		7.48	□□□□□ -1.21
SKP1	YDR328C	TSR4	P25040	408 aa		7.48	□□□□□ -1.21
SKP1	YDR328C	RPC37	P36121	282 aa		7.48	□□□□□ -1.21
SKP1	YDR328C	YEL028W	P39989	153 aa		7.48	□□□□□ -1.21
SKP1	YDR328C	SCC4	P40090	624 aa		7.48	□□□□□ -1.21
SKP1	YDR328C	KTR7	P40504	517 aa		7.48	□□□□□ -1.21
SKP1	YDR328C	YJL132W	P47014	750 aa		7.48	□□□□□ -1.21
SKP1	YDR328C	COP1	P53622	1201 aa	Known RBP	7.48	□□□□□ -1.21
SKP1	YDR328C	COG6	P53959	839 aa		7.48	□□□□□ -1.21
SKP1	YDR328C	SHR3	Q02774	210 aa		7.48	□□□□□ -1.21
SKP1	YDR328C	INP2	Q03824	705 aa		7.48	□□□□□ -1.21
SKP1	YDR328C	YMR027W	Q04371	470 aa		7.48	□□□□□ -1.21
SKP1	YDR328C	FRA1	Q07825	749 aa		7.48	□□□□□ -1.21
SKP1	YDR328C	CMD1	P06787	147 aa	Known RBP	7.47	□□□□□ -1.21
SKP1	YDR328C	ADY2	P25613	283 aa		7.47	□□□□□ -1.21
SKP1	YDR328C	CCT2	P39076	527 aa	Known RBP	7.47	□□□□□ -1.21
SKP1	YDR328C	ATM1	P40416	690 aa		7.47	□□□□□ -1.21
SKP1	YDR328C	RPS10B	P46784	105 aa	Known RBP	7.47	□□□□□ -1.21
SKP1	YDR328C	CTK3	P46963	296 aa	Predicted RBP	7.47	□□□□□ -1.21
SKP1	YDR328C	IML2	P47031	731 aa		7.47	□□□□□ -1.21
SKP1	YDR328C	TAH11	P47112	604 aa		7.47	□□□□□ -1.21
SKP1	YDR328C	CPR6	P53691	371 aa	Known RBP	7.47	□□□□□ -1.21
SKP1	YDR328C	SFH1	Q06168	426 aa		7.47	□□□□□ -1.21
SKP1	YDR328C	RPS10A	Q08745	105 aa	Predicted RBP	7.47	□□□□□ -1.21
SKP1	YDR328C	ARG4	P04076	463 aa	Predicted RBP	7.46	□□□□□ -1.22
SKP1	YDR328C	ILV6	P25605	309 aa	Known RBP	7.46	□□□□□ -1.22
SKP1	YDR328C	CDC20	P26309	610 aa		7.46	□□□□□ -1.22
SKP1	YDR328C	PMI40	P29952	429 aa	Known RBP	7.46	□□□□□ -1.22
SKP1	YDR328C	MET22	P32179	357 aa		7.46	□□□□□ -1.22
SKP1	YDR328C	UTR2	P32623	467 aa		7.46	□□□□□ -1.22
SKP1	YDR328C	KAP104	P38217	918 aa	Known RBP	7.46	□□□□□ -1.22
SKP1	YDR328C	OTU2	P38747	307 aa	Known RBP	7.46	□□□□□ -1.22
SKP1	YDR328C	PEX28	P38848	579 aa		7.46	□□□□□ -1.22
SKP1	YDR328C	CIN4	P39110	191 aa		7.46	□□□□□ -1.22
SKP1	YDR328C	SAP1	P39955	897 aa	Known RBP	7.46	□□□□□ -1.22
SKP1	YDR328C	YAT2	P40017	923 aa		7.46	□□□□□ -1.22
SKP1	YDR328C	EMW1	P42842	904 aa	Known RBP	7.46	□□□□□ -1.22
SKP1	YDR328C	CNN1	P43618	361 aa		7.46	□□□□□ -1.22
SKP1	YDR328C	URB2	P47108	1174 aa		7.46	□□□□□ -1.22
SKP1	YDR328C	YJR079W	P47126	109 aa		7.46	□□□□□ -1.22
SKP1	YDR328C	RTA1	P53047	317 aa		7.46	□□□□□ -1.22
SKP1	YDR328C	PCL10	P53124	433 aa		7.46	□□□□□ -1.22
SKP1	YDR328C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	7.46	□□□□□ -1.22	not detected
SKP1	YDR328C	USA1	Q03714	838 aa		7.46	□□□□□ -1.22
SKP1	YDR328C	MSH6	Q03834	1242 aa		7.46	□□□□□ -1.22
SKP1	YDR328C	ARP9	Q05123	467 aa		7.46	□□□□□ -1.22
SKP1	YDR328C	AAD15	Q08361	143 aa		7.46	□□□□□ -1.22
SKP1	YDR328C	YOR387C	Q08910	206 aa		7.46	□□□□□ -1.22
SKP1	YDR328C	YDR034W-B	Q6Q5X2	51 aa		7.46	□□□□□ -1.22
SKP1	YDR328C	ILS1	P09436	1072 aa	Known RBP	7.45	□□□□□ -1.22
SKP1	YDR328C	MIS1	P09440	975 aa	Known RBP	7.45	□□□□□ -1.22
SKP1	YDR328C	ERR1	P0CX10	437 aa		7.45	□□□□□ -1.22
SKP1	YDR328C	ERR2	P0CX11	437 aa		7.45	□□□□□ -1.22
SKP1	YDR328C	APE1	P14904	514 aa		7.45	□□□□□ -1.22
SKP1	YDR328C	PPH22	P23595	377 aa		7.45	□□□□□ -1.22
SKP1	YDR328C	PEX34	P25584	144 aa		7.45	□□□□□ -1.22
SKP1	YDR328C	URA7	P28274	579 aa	Known RBP	7.45	□□□□□ -1.22
SKP1	YDR328C	SEC6	P32844	805 aa		7.45	□□□□□ -1.22
SKP1	YDR328C	ATG12	P38316	186 aa		7.45	□□□□□ -1.22
SKP1	YDR328C	URA8	P38627	578 aa	Predicted RBP	7.45	□□□□□ -1.22
SKP1	YDR328C	YIL161W	P40449	235 aa	Known RBP	7.45	□□□□□ -1.22
SKP1	YDR328C	MOB1	P40484	314 aa		7.45	□□□□□ -1.22
SKP1	YDR328C	ALA1	P40825	983 aa	Known RBP	7.45	□□□□□ -1.22
SKP1	YDR328C	UFE1	P41834	346 aa		7.45	□□□□□ -1.22
SKP1	YDR328C	ERR3	P42222	437 aa		7.45	□□□□□ -1.22
SKP1	YDR328C	LSB6	P42951	607 aa		7.45	□□□□□ -1.22
SKP1	YDR328C	DLD2	P46681	530 aa	Known RBP	7.45	□□□□□ -1.22
SKP1	YDR328C	COQ6	P53318	479 aa		7.45	□□□□□ -1.22
SKP1	YDR328C	TRM112	P53738	135 aa	Predicted RBP	7.45	□□□□□ -1.22
SKP1	YDR328C	RNT1	Q02555	471 aa		7.45	□□□□□ -1.22
SKP1	YDR328C	SWC7	Q06707	132 aa		7.45	□□□□□ -1.22
SKP1	YDR328C	MPC54	Q08550	464 aa		7.45	□□□□□ -1.22
SKP1	YDR328C	YOR223W	Q12015	292 aa		7.45	□□□□□ -1.22
SKP1	YDR328C	ILV2	P07342	687 aa	Known RBP	7.44	□□□□□ -1.22
SKP1	YDR328C	MRPL25	P23369	157 aa		7.44	□□□□□ -1.22
SKP1	YDR328C	KAR4	P25583	335 aa		7.44	□□□□□ -1.22
SKP1	YDR328C	COQ8	P27697	501 aa		7.44	□□□□□ -1.22
SKP1	YDR328C	SRP101	P32916	621 aa		7.44	□□□□□ -1.22
SKP1	YDR328C	PTC3	P34221	468 aa	Known RBP	7.44	□□□□□ -1.22
SKP1	YDR328C	YBP1	P38315	674 aa		7.44	□□□□□ -1.22
SKP1	YDR328C	VAC8	P39968	578 aa		7.44	□□□□□ -1.22
SKP1	YDR328C	PXA1	P41909	870 aa		7.44	□□□□□ -1.22
SKP1	YDR328C	TAN1	P53072	289 aa	Predicted RBP	7.44	□□□□□ -1.22
SKP1	YDR328C	ENT5	Q03769	411 aa	Known RBP	7.44	□□□□□ -1.22
SKP1	YDR328C	YMR160W	Q03823	816 aa		7.44	□□□□□ -1.22
SKP1	YDR328C	RTN1	Q04947	295 aa	Known RBP	7.44	□□□□□ -1.22
SKP1	YDR328C	YLR012C	Q07927	99 aa		7.44	□□□□□ -1.22
SKP1	YDR328C	CUE5	Q08412	411 aa	Known RBP	7.44	□□□□□ -1.22
SKP1	YDR328C	RUD3	Q12234	484 aa	Known RBP	7.44	□□□□□ -1.22

Retrieved 100 of 5,963 RNA–protein pairs in 88.2 ms