RNA–Protein interactions for RNA: YDR228C

PCF11, Transcript of mRNA 3' end processing factor, yeastyeast

Gene PCF11, Length 1,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCF11YDR228C YGR296C-BP0CX96 160 aa2.59□□□□□ -1.99
PCF11YDR228C YPL283W-BP0CX97 160 aa2.59□□□□□ -1.99
PCF11YDR228C YPR204C-AP0CX98 160 aa2.59□□□□□ -1.99
PCF11YDR228C ASK1P35734 292 aa2.59□□□□□ -1.99
PCF11YDR228C SPC97P38863 823 aa2.59□□□□□ -1.99
PCF11YDR228C FPR3P38911 411 aaKnown RBP2.59□□□□□ -1.99
PCF11YDR228C YEL076CP39971 216 aa2.59□□□□□ -1.99
PCF11YDR228C PCI8P40512 444 aa2.59□□□□□ -1.99
PCF11YDR228C SKY1Q03656 742 aa2.59□□□□□ -1.99
PCF11YDR228C FAP7Q12055 197 aaPredicted RBP2.59□□□□□ -1.99
PCF11YDR228C YPK1P12688 680 aaKnown RBP2.58□□□□□ -2
PCF11YDR228C URE2P23202 354 aaKnown RBP2.58□□□□□ -2
PCF11YDR228C PRP45P28004 379 aaPredicted RBP2.58□□□□□ -2
PCF11YDR228C SDH8P38345 138 aa2.58□□□□□ -2
PCF11YDR228C RAD26P40352 1085 aa2.58□□□□□ -2
PCF11YDR228C MNT2P53059 558 aa2.58□□□□□ -2
PCF11YDR228C SQS1P53866 767 aaKnown RBP2.58□□□□□ -2
PCF11YDR228C RAD33Q04231 177 aa2.58□□□□□ -2
PCF11YDR228C CRC1Q12289 327 aa2.58□□□□□ -2
PCF11YDR228C YGR161W-CQ3E744 92 aa2.58□□□□□ -2
PCF11YDR228C Q0010Q9ZZX9 128 aa2.58□□□□□ -2
PCF11YDR228C CET1O13297 549 aaPredicted RBP2.58□□□□□ -2
PCF11YDR228C YMR085WP0CF18 432 aa2.58□□□□□ -2
PCF11YDR228C CBP3P21560 335 aa2.58□□□□□ -2
PCF11YDR228C CFD1P40558 293 aa2.58□□□□□ -2
PCF11YDR228C MEP2P41948 499 aa2.58□□□□□ -2
PCF11YDR228C CYK3Q07533 885 aa2.58□□□□□ -2
PCF11YDR228C CRT10Q08226 957 aa2.58□□□□□ -2
PCF11YDR228C YOR378WQ08902 515 aa2.58□□□□□ -2
PCF11YDR228C PCK1P10963 549 aa2.57□□□□□ -2
PCF11YDR228C PXL1P36166 706 aa2.57□□□□□ -2
PCF11YDR228C JHD1P40034 492 aa2.57□□□□□ -2
PCF11YDR228C NIT2P47016 307 aa2.57□□□□□ -2
PCF11YDR228C COS12P53053 380 aa2.57□□□□□ -2
PCF11YDR228C SCW4P53334 386 aaKnown RBP2.57□□□□□ -2
PCF11YDR228C MTD1Q02046 320 aaKnown RBP2.57□□□□□ -2
PCF11YDR228C TPO3Q06451 622 aa2.57□□□□□ -2
PCF11YDR228C YPR027CQ12079 277 aa2.57□□□□□ -2
PCF11YDR228C DIN7Q12086 430 aa2.57□□□□□ -2
PCF11YDR228C AHA1Q12449 350 aaKnown RBP2.57□□□□□ -2
PCF11YDR228C YPR089WO13585 888 aa2.56□□□□□ -2
PCF11YDR228C SEC12P11655 471 aa2.56□□□□□ -2
PCF11YDR228C YAP1P19880 650 aaKnown RBP2.56□□□□□ -2
PCF11YDR228C BET2P20133 325 aa2.56□□□□□ -2
PCF11YDR228C ARG1P22768 420 aa2.56□□□□□ -2
PCF11YDR228C MAD2P40958 196 aa2.56□□□□□ -2
PCF11YDR228C IRC7P43623 340 aa2.56□□□□□ -2
PCF11YDR228C PNO1Q99216 274 aaKnown RBP2.56□□□□□ -2
PCF11YDR228C CHO2P05374 869 aaKnown RBP2.56□□□□□ -2
PCF11YDR228C YCP4P25349 247 aaKnown RBP2.56□□□□□ -2
PCF11YDR228C GDA1P32621 518 aa2.56□□□□□ -2
PCF11YDR228C VPS8P39702 1274 aa2.56□□□□□ -2
PCF11YDR228C PEA2P40091 420 aa2.56□□□□□ -2
PCF11YDR228C YIL092WP40497 633 aa2.56□□□□□ -2
PCF11YDR228C COP1P53622 1201 aaKnown RBP2.56□□□□□ -2
PCF11YDR228C RMP1Q12530 201 aa2.56□□□□□ -2
PCF11YDR228C AMD2P22580 549 aa2.55□□□□□ -2
PCF11YDR228C IMD2P38697 523 aaKnown RBP2.55□□□□□ -2
PCF11YDR228C EAF5P39995 279 aa2.55□□□□□ -2
PCF11YDR228C YIL024CP40543 189 aa2.55□□□□□ -2
PCF11YDR228C IMD3P50095 523 aaKnown RBP2.55□□□□□ -2
PCF11YDR228C YNR071CP53757 342 aa2.55□□□□□ -2
PCF11YDR228C RPL15BP54780 204 aaPredicted RBP2.55□□□□□ -2
PCF11YDR228C RTK1Q12100 620 aaPredicted RBP2.55□□□□□ -2
PCF11YDR228C LCB4Q12246 624 aa2.55□□□□□ -2
PCF11YDR228C BI2P03873 423 aa2.54□□□□□ -2
PCF11YDR228C URA3P03962 267 aa2.54□□□□□ -2
PCF11YDR228C KGD2P19262 463 aaPredicted RBP2.54□□□□□ -2
PCF11YDR228C MGM1P32266 881 aa2.54□□□□□ -2
PCF11YDR228C KES1P35844 434 aaKnown RBP2.54□□□□□ -2
PCF11YDR228C UBP12P39538 1254 aa2.54□□□□□ -2
PCF11YDR228C YNL058CP53947 316 aa2.54□□□□□ -2
PCF11YDR228C DOS2P54858 310 aa2.54□□□□□ -2
PCF11YDR228C RAD34Q06665 692 aa2.54□□□□□ -2
PCF11YDR228C CWC2Q12046 339 aaPredicted RBP2.54□□□□□ -2
PCF11YDR228C AIM17P23180 465 aaKnown RBP2.54□□□□□ -2
PCF11YDR228C HEM12P32347 362 aaPredicted RBP2.54□□□□□ -2
PCF11YDR228C FTH1P38310 465 aa2.54□□□□□ -2
PCF11YDR228C RRP8P38961 392 aaKnown RBP2.54□□□□□ -2
PCF11YDR228C SSP120P39931 234 aaKnown RBP2.54□□□□□ -2
PCF11YDR228C LAS21P40367 830 aa2.54□□□□□ -2
PCF11YDR228C CIN1P40987 1014 aa2.54□□□□□ -2
PCF11YDR228C NOP2P40991 618 aaKnown RBP2.54□□□□□ -2
PCF11YDR228C CIR1P42940 261 aa2.54□□□□□ -2
PCF11YDR228C YGL081WP53156 320 aa2.54□□□□□ -2
PCF11YDR228C MDR1P53258 950 aa2.54□□□□□ -2
PCF11YDR228C YPL071CQ02864 156 aa2.54□□□□□ -2
PCF11YDR228C YML119WQ03208 357 aa2.54□□□□□ -2
PCF11YDR228C MRPL1Q04599 285 aa2.54□□□□□ -2
PCF11YDR228C COX11P19516 300 aaKnown RBP2.53□□□□□ -2
PCF11YDR228C RRP43P25359 394 aaPredicted RBP2.53□□□□□ -2
PCF11YDR228C COQ3P27680 312 aa2.53□□□□□ -2
PCF11YDR228C PLC1P32383 869 aa2.53□□□□□ -2
PCF11YDR228C PET309P32522 965 aaPredicted RBP2.53□□□□□ -2
PCF11YDR228C RGT1P32862 1170 aa2.53□□□□□ -2
PCF11YDR228C YMR124WP39523 943 aaKnown RBP2.53□□□□□ -2
PCF11YDR228C STL1P39932 569 aa2.53□□□□□ -2
PCF11YDR228C MAM1P40065 302 aa2.53□□□□□ -2
PCF11YDR228C GSM1P42950 618 aa2.53□□□□□ -2
PCF11YDR228C NUP53Q03790 475 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms