RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPR28	YDR218C	RTN2	Q12443	393 aa		4.94	□□□□□ -1.62
SPR28	YDR218C	ARG3	P05150	338 aa		4.93	□□□□□ -1.62
SPR28	YDR218C	ILS1	P09436	1072 aa	Known RBP	4.93	□□□□□ -1.62
SPR28	YDR218C	POL3	P15436	1097 aa		4.93	□□□□□ -1.62
SPR28	YDR218C	NCP1	P16603	691 aa	Known RBP	4.93	□□□□□ -1.62
SPR28	YDR218C	GPI10	P30777	616 aa		4.93	□□□□□ -1.62
SPR28	YDR218C	DGR2	P32330	852 aa		4.93	□□□□□ -1.62
SPR28	YDR218C	ERG3	P32353	365 aa		4.93	□□□□□ -1.62
SPR28	YDR218C	SMI1	P32566	505 aa		4.93	□□□□□ -1.62
SPR28	YDR218C	CAB3	P36076	571 aa		4.93	□□□□□ -1.62
SPR28	YDR218C	APE3	P37302	537 aa	Known RBP	4.93	□□□□□ -1.62
SPR28	YDR218C	FAT1	P38225	669 aa		4.93	□□□□□ -1.62
SPR28	YDR218C	SSP120	P39931	234 aa	Known RBP	4.93	□□□□□ -1.62
SPR28	YDR218C	YER158C	P40095	573 aa		4.93	□□□□□ -1.62
SPR28	YDR218C	CCT7	P42943	550 aa	Known RBP	4.93	□□□□□ -1.62
SPR28	YDR218C	ENP2	P48234	707 aa	Known RBP	4.93	□□□□□ -1.62
SPR28	YDR218C	EOS1	P53938	366 aa		4.93	□□□□□ -1.62
SPR28	YDR218C	SLU7	Q02775	382 aa	Known RBP	4.93	□□□□□ -1.62
SPR28	YDR218C	SNO4	Q04902	237 aa		4.93	□□□□□ -1.62
SPR28	YDR218C	CRR1	Q05790	422 aa		4.93	□□□□□ -1.62
SPR28	YDR218C	YLH47	Q06493	454 aa		4.93	□□□□□ -1.62
SPR28	YDR218C	HSP33	Q08914	237 aa	Known RBP	4.93	□□□□□ -1.62
SPR28	YDR218C	HSP32	Q08992	237 aa		4.93	□□□□□ -1.62
SPR28	YDR218C	PDH1	Q12428	516 aa	Known RBP	4.93	□□□□□ -1.62
SPR28	YDR218C	BET2	P20133	325 aa		4.92	□□□□□ -1.62
SPR28	YDR218C	OLE1	P21147	510 aa	Known RBP	4.92	□□□□□ -1.62
SPR28	YDR218C	CBP3	P21560	335 aa		4.92	□□□□□ -1.62
SPR28	YDR218C	REC107	P21651	314 aa		4.92	□□□□□ -1.62
SPR28	YDR218C	ATP12	P22135	325 aa		4.92	□□□□□ -1.62
SPR28	YDR218C	PRE8	P23639	250 aa		4.92	□□□□□ -1.62
SPR28	YDR218C	PRP22	P24384	1145 aa	Known RBP	4.92	□□□□□ -1.62
SPR28	YDR218C	ROX1	P25042	368 aa		4.92	□□□□□ -1.62
SPR28	YDR218C	OCA4	P25366	362 aa		4.92	□□□□□ -1.62
SPR28	YDR218C	SEC21	P32074	935 aa	Known RBP	4.92	□□□□□ -1.62
SPR28	YDR218C	EFT1	P32324	842 aa	Known RBP	4.92	□□□□□ -1.62
SPR28	YDR218C	CBF2	P32504	956 aa		4.92	□□□□□ -1.62
SPR28	YDR218C	STE14	P32584	239 aa		4.92	□□□□□ -1.62
SPR28	YDR218C	SSE1	P32589	693 aa	Known RBP	4.92	□□□□□ -1.62
SPR28	YDR218C	OAR1	P35731	278 aa		4.92	□□□□□ -1.62
SPR28	YDR218C	SWH1	P35845	1188 aa		4.92	□□□□□ -1.62
SPR28	YDR218C	IFA38	P38286	347 aa		4.92	□□□□□ -1.62
SPR28	YDR218C	TSL1	P38427	1098 aa	Known RBP	4.92	□□□□□ -1.62
SPR28	YDR218C	DUN1	P39009	513 aa		4.92	□□□□□ -1.62
SPR28	YDR218C	EAF5	P39995	279 aa		4.92	□□□□□ -1.62
SPR28	YDR218C	LCB2	P40970	561 aa		4.92	□□□□□ -1.62
SPR28	YDR218C	PUS4	P48567	403 aa	Known RBP	4.92	□□□□□ -1.62
SPR28	YDR218C	SHE10	P53075	577 aa		4.92	□□□□□ -1.62
SPR28	YDR218C	MTD1	Q02046	320 aa	Known RBP	4.92	□□□□□ -1.62
SPR28	YDR218C	CWC21	Q03375	135 aa	Known RBP	4.92	□□□□□ -1.62
SPR28	YDR218C	RAD33	Q04231	177 aa		4.92	□□□□□ -1.62
SPR28	YDR218C	GYL1	Q04322	720 aa		4.92	□□□□□ -1.62
SPR28	YDR218C	ARP9	Q05123	467 aa		4.92	□□□□□ -1.62
SPR28	YDR218C	YPR196W	Q06595	470 aa		4.92	□□□□□ -1.62
SPR28	YDR218C	MLH2	Q07980	695 aa		4.92	□□□□□ -1.62
SPR28	YDR218C	NGL1	Q08213	363 aa	Known RBP	4.92	□□□□□ -1.62
SPR28	YDR218C	NFI1	Q12216	726 aa		4.92	□□□□□ -1.62
SPR28	YDR218C	RPS9A	O13516	197 aa	Known RBP	4.91	□□□□□ -1.62
SPR28	YDR218C	ADH4	P10127	382 aa		4.91	□□□□□ -1.62
SPR28	YDR218C	APN1	P22936	367 aa		4.91	□□□□□ -1.62
SPR28	YDR218C	LCB1	P25045	558 aa	Known RBP	4.91	□□□□□ -1.62
SPR28	YDR218C	STE50	P25344	346 aa		4.91	□□□□□ -1.62
SPR28	YDR218C	PEP3	P27801	918 aa		4.91	□□□□□ -1.62
SPR28	YDR218C	CYS3	P31373	394 aa	Known RBP	4.91	□□□□□ -1.62
SPR28	YDR218C	PUP2	P32379	260 aa		4.91	□□□□□ -1.62
SPR28	YDR218C	YKR051W	P36142	418 aa		4.91	□□□□□ -1.62
SPR28	YDR218C	SET5	P38890	526 aa	Known RBP	4.91	□□□□□ -1.62
SPR28	YDR218C	SPT8	P38915	602 aa		4.91	□□□□□ -1.62
SPR28	YDR218C	NPR2	P39923	615 aa		4.91	□□□□□ -1.62
SPR28	YDR218C	VID28	P40547	921 aa		4.91	□□□□□ -1.62
SPR28	YDR218C	SSU1	P41930	458 aa		4.91	□□□□□ -1.62
SPR28	YDR218C	GYP7	P48365	746 aa		4.91	□□□□□ -1.62
SPR28	YDR218C	ARE2	P53629	642 aa	Known RBP	4.91	□□□□□ -1.62
SPR28	YDR218C	DPB4	Q04603	196 aa	Known RBP	4.91	□□□□□ -1.62
SPR28	YDR218C	IWR1	Q07532	353 aa	Predicted RBP	4.91	□□□□□ -1.62
SPR28	YDR218C	CFT2	Q12102	859 aa	Predicted RBP	4.91	□□□□□ -1.62
SPR28	YDR218C	TRM13	Q12383	476 aa		4.91	□□□□□ -1.62
SPR28	YDR218C	YOR111W	Q99210	232 aa		4.91	□□□□□ -1.62
SPR28	YDR218C	QCR6	P00127	147 aa		4.9	□□□□□ -1.63
SPR28	YDR218C	TPK1	P06244	397 aa		4.9	□□□□□ -1.63
SPR28	YDR218C	PCK1	P10963	549 aa		4.9	□□□□□ -1.63
SPR28	YDR218C	PWP1	P21304	576 aa	Known RBP	4.9	□□□□□ -1.63
SPR28	YDR218C	MIH1	P23748	554 aa		4.9	□□□□□ -1.63
SPR28	YDR218C	MGM1	P32266	881 aa		4.9	□□□□□ -1.63
SPR28	YDR218C	RIB7	P33312	244 aa		4.9	□□□□□ -1.63
SPR28	YDR218C	ATG19	P35193	415 aa		4.9	□□□□□ -1.63
SPR28	YDR218C	YBL029W	P38201	376 aa		4.9	□□□□□ -1.63
SPR28	YDR218C	STT3	P39007	718 aa	Known RBP	4.9	□□□□□ -1.63
SPR28	YDR218C	YJR061W	P40355	935 aa		4.9	□□□□□ -1.63
SPR28	YDR218C	DUO1	P53168	247 aa	Known RBP	4.9	□□□□□ -1.63
SPR28	YDR218C	BNI5	P53890	448 aa	Known RBP	4.9	□□□□□ -1.63
SPR28	YDR218C	AIM32	Q04689	311 aa		4.9	□□□□□ -1.63
SPR28	YDR218C	YOL073C	Q08232	322 aa		4.9	□□□□□ -1.63
SPR28	YDR218C	HAL9	Q12180	1030 aa		4.9	□□□□□ -1.63
SPR28	YDR218C	FRE6	Q12473	712 aa		4.9	□□□□□ -1.63
SPR28	YDR218C	PGA3	Q12746	312 aa	Known RBP	4.9	□□□□□ -1.63
SPR28	YDR218C	YBR126W-A	Q8TGU7	68 aa		4.9	□□□□□ -1.63
SPR28	YDR218C	YMR084W	A2P2R3	262 aa		4.89	□□□□□ -1.63
SPR28	YDR218C	YLR302C	O13544	120 aa		4.89	□□□□□ -1.63
SPR28	YDR218C	TUF1	P02992	437 aa	Known RBP	4.89	□□□□□ -1.63
SPR28	YDR218C	YEL076C-A	P0CX16	216 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms