RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A SSZ1P38788 538 aaKnown RBP0.72□□□□□ -2.29
TFB5YDR079C-A HUL4P40985 892 aa0.72□□□□□ -2.29
TFB5YDR079C-A RCR2Q03446 210 aaKnown RBP0.72□□□□□ -2.29
TFB5YDR079C-A AAC1P04710 309 aa0.71□□□□□ -2.3
TFB5YDR079C-A PRP22P24384 1145 aaKnown RBP0.71□□□□□ -2.3
TFB5YDR079C-A CAP1P28495 268 aaKnown RBP0.71□□□□□ -2.3
TFB5YDR079C-A RPN10P38886 268 aaKnown RBP0.71□□□□□ -2.3
TFB5YDR079C-A RAD26P40352 1085 aa0.71□□□□□ -2.3
TFB5YDR079C-A COG8Q04632 607 aa0.71□□□□□ -2.3
TFB5YDR079C-A YDL124WQ07551 312 aaKnown RBP0.71□□□□□ -2.3
TFB5YDR079C-A PDA1P16387 420 aaKnown RBP0.7□□□□□ -2.3
TFB5YDR079C-A YHR202WP38887 602 aa0.7□□□□□ -2.3
TFB5YDR079C-A MAD1P40957 749 aa0.7□□□□□ -2.3
TFB5YDR079C-A YGL242CP53066 181 aa0.7□□□□□ -2.3
TFB5YDR079C-A RNY1Q02933 434 aaKnown RBP0.7□□□□□ -2.3
TFB5YDR079C-A RAD33Q04231 177 aa0.7□□□□□ -2.3
TFB5YDR079C-A YPS7Q06325 596 aa0.7□□□□□ -2.3
TFB5YDR079C-A CRT10Q08226 957 aa0.7□□□□□ -2.3
TFB5YDR079C-A HNM1P19807 563 aa0.69□□□□□ -2.3
TFB5YDR079C-A MTC2P34246 357 aa0.69□□□□□ -2.3
TFB5YDR079C-A ASG1P40467 964 aa0.69□□□□□ -2.3
TFB5YDR079C-A SMK1P41808 388 aa0.69□□□□□ -2.3
TFB5YDR079C-A YJL107CP42947 387 aa0.69□□□□□ -2.3
TFB5YDR079C-A PSP1P50896 841 aaKnown RBP0.69□□□□□ -2.3
TFB5YDR079C-A TAF8Q03750 510 aa0.69□□□□□ -2.3
TFB5YDR079C-A DAP1Q12091 152 aa0.69□□□□□ -2.3
TFB5YDR079C-A LYS21Q12122 440 aaKnown RBP0.69□□□□□ -2.3
TFB5YDR079C-A PCK1P10963 549 aa0.68□□□□□ -2.3
TFB5YDR079C-A RPS2P25443 254 aaKnown RBP0.68□□□□□ -2.3
TFB5YDR079C-A ASF1P32447 279 aa0.68□□□□□ -2.3
TFB5YDR079C-A KES1P35844 434 aaKnown RBP0.68□□□□□ -2.3
TFB5YDR079C-A CIR1P42940 261 aa0.68□□□□□ -2.3
TFB5YDR079C-A YJR039WP47107 1121 aa0.68□□□□□ -2.3
TFB5YDR079C-A MAL11P53048 616 aa0.68□□□□□ -2.3
TFB5YDR079C-A HLR1Q04429 423 aa0.68□□□□□ -2.3
TFB5YDR079C-A YMR254CQ04838 102 aa0.68□□□□□ -2.3
TFB5YDR079C-A IME1P21190 360 aa0.67□□□□□ -2.3
TFB5YDR079C-A IMG2P25642 146 aaPredicted RBP0.67□□□□□ -2.3
TFB5YDR079C-A BET3P36149 193 aa0.67□□□□□ -2.3
TFB5YDR079C-A CRG1P38892 291 aaRIP-Chip data0.67□□□□□ -2.3not detected
TFB5YDR079C-A ERV46P39727 415 aa0.67□□□□□ -2.3
TFB5YDR079C-A IZH1Q03419 316 aa0.67□□□□□ -2.3
TFB5YDR079C-A ARP9Q05123 467 aa0.67□□□□□ -2.3
TFB5YDR079C-A RAD34Q06665 692 aa0.67□□□□□ -2.3
TFB5YDR079C-A DIN7Q12086 430 aa0.67□□□□□ -2.3
TFB5YDR079C-A GLN4P13188 809 aaKnown RBP0.66□□□□□ -2.3
TFB5YDR079C-A GDA1P32621 518 aa0.66□□□□□ -2.3
TFB5YDR079C-A MNN4P36044 1178 aa0.66□□□□□ -2.3
TFB5YDR079C-A NUG1P40010 520 aaKnown RBP0.66□□□□□ -2.3
TFB5YDR079C-A BUD8P41698 603 aa0.66□□□□□ -2.3
TFB5YDR079C-A ESBP6P53918 673 aa0.66□□□□□ -2.3
TFB5YDR079C-A SNP1Q00916 300 aaPredicted RBP0.66□□□□□ -2.3
TFB5YDR079C-A ACS1Q01574 713 aa0.66□□□□□ -2.3
TFB5YDR079C-A YOR389WQ08912 624 aa0.66□□□□□ -2.3
TFB5YDR079C-A OSH2Q12451 1283 aa0.66□□□□□ -2.3
TFB5YDR079C-A CIT2P08679 460 aa0.65□□□□□ -2.31
TFB5YDR079C-A PRS1P32895 427 aaKnown RBP0.65□□□□□ -2.31
TFB5YDR079C-A YEL025CP39991 1188 aa0.65□□□□□ -2.31
TFB5YDR079C-A FTR1P40088 404 aa0.65□□□□□ -2.31
TFB5YDR079C-A NOP2P40991 618 aaKnown RBP0.65□□□□□ -2.31
TFB5YDR079C-A YNL092WP53934 400 aa0.65□□□□□ -2.31
TFB5YDR079C-A MTD1Q02046 320 aaKnown RBP0.65□□□□□ -2.31
TFB5YDR079C-A RTC1Q08281 1341 aa0.64□□□□□ -2.31
TFB5YDR079C-A YPK1P12688 680 aaKnown RBP0.64□□□□□ -2.31
TFB5YDR079C-A HSP60P19882 572 aaKnown RBP0.64□□□□□ -2.31
TFB5YDR079C-A YEL045CP32616 141 aa0.64□□□□□ -2.31
TFB5YDR079C-A PXA1P41909 870 aa0.64□□□□□ -2.31
TFB5YDR079C-A NHX1Q04121 633 aa0.64□□□□□ -2.31
TFB5YDR079C-A ARR3Q06598 404 aa0.64□□□□□ -2.31
TFB5YDR079C-A CIT1P00890 479 aa0.63□□□□□ -2.31
TFB5YDR079C-A GAL11P19659 1081 aa0.63□□□□□ -2.31
TFB5YDR079C-A RAD24P32641 659 aa0.63□□□□□ -2.31
TFB5YDR079C-A STO1P34160 861 aaKnown RBP0.63□□□□□ -2.31
TFB5YDR079C-A PBP2P38151 413 aaKnown RBP RIP-Chip data0.63□□□□□ -2.31not detected
TFB5YDR079C-A ARN1P38731 627 aa0.63□□□□□ -2.31
TFB5YDR079C-A ATG27P46989 271 aa0.63□□□□□ -2.31
TFB5YDR079C-A GPD1Q00055 391 aaKnown RBP0.63□□□□□ -2.31
TFB5YDR079C-A YMR210WQ03649 449 aa0.63□□□□□ -2.31
TFB5YDR079C-A DCS2Q12123 353 aa0.63□□□□□ -2.31
TFB5YDR079C-A YLR112WQ12130 139 aa0.63□□□□□ -2.31
TFB5YDR079C-A BI3Q9ZZW7 517 aa0.63□□□□□ -2.31
TFB5YDR079C-A MSH1P25846 959 aa0.62□□□□□ -2.31
TFB5YDR079C-A PRE4P30657 266 aa0.62□□□□□ -2.31
TFB5YDR079C-A SWC3P31376 625 aa0.62□□□□□ -2.31
TFB5YDR079C-A CDS1P38221 457 aa0.62□□□□□ -2.31
TFB5YDR079C-A BEM4P39011 633 aa0.62□□□□□ -2.31
TFB5YDR079C-A VPS25P47142 202 aa0.62□□□□□ -2.31
TFB5YDR079C-A ORC5P50874 479 aa0.62□□□□□ -2.31
TFB5YDR079C-A YGL039WP53183 348 aaKnown RBP0.62□□□□□ -2.31
TFB5YDR079C-A BAR1P12630 587 aa0.61□□□□□ -2.31
TFB5YDR079C-A RAD4P14736 754 aa0.61□□□□□ -2.31
TFB5YDR079C-A RRP43P25359 394 aaPredicted RBP0.61□□□□□ -2.31
TFB5YDR079C-A YKU70P32807 602 aa0.61□□□□□ -2.31
TFB5YDR079C-A RIM2P38127 377 aa0.61□□□□□ -2.31
TFB5YDR079C-A LRO1P40345 661 aa0.61□□□□□ -2.31
TFB5YDR079C-A CAF16P43569 289 aa0.61□□□□□ -2.31
TFB5YDR079C-A YML020WQ03722 664 aa0.61□□□□□ -2.31
TFB5YDR079C-A PPN1Q04119 674 aa0.61□□□□□ -2.31
TFB5YDR079C-A ECI1Q05871 280 aa0.61□□□□□ -2.31
TFB5YDR079C-A HEM3P28789 327 aa0.6□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms