RNA–Protein interactions for RNA: YDR054C

CDC34, Transcript of Ubiquitin-conjugating enzyme (E2), yeastyeast

Gene CDC34, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC34YDR054C AI5_BETAQ9ZZX0 354 aa6.47□□□□□ -1.37
CDC34YDR054C HEM13P11353 328 aaKnown RBP6.46□□□□□ -1.38
CDC34YDR054C SFL1P20134 766 aa6.46□□□□□ -1.38
CDC34YDR054C PCL2P25693 308 aa6.46□□□□□ -1.38
CDC34YDR054C TRM2P33753 639 aa6.46□□□□□ -1.38
CDC34YDR054C RIM11P38615 370 aa6.46□□□□□ -1.38
CDC34YDR054C SMF1P38925 575 aa6.46□□□□□ -1.38
CDC34YDR054C OAF1P39720 1047 aaPredicted RBP6.46□□□□□ -1.38
CDC34YDR054C NDC80P40460 691 aa6.46□□□□□ -1.38
CDC34YDR054C LAM5P43560 674 aa6.46□□□□□ -1.38
CDC34YDR054C SGM1P47166 707 aa6.46□□□□□ -1.38
CDC34YDR054C CWC21Q03375 135 aaKnown RBP6.46□□□□□ -1.38
CDC34YDR054C YDR278CQ05612 105 aa6.46□□□□□ -1.38
CDC34YDR054C YPL066WQ12194 479 aa6.46□□□□□ -1.38
CDC34YDR054C YDR524C-BQ3E6R4 66 aa6.46□□□□□ -1.38
CDC34YDR054C GFA1P14742 717 aaKnown RBP6.45□□□□□ -1.38
CDC34YDR054C CKI1P20485 582 aa6.45□□□□□ -1.38
CDC34YDR054C SRB4P32569 687 aa6.45□□□□□ -1.38
CDC34YDR054C RDH54P38086 958 aa6.45□□□□□ -1.38
CDC34YDR054C MUM2P38236 366 aa6.45□□□□□ -1.38
CDC34YDR054C REI1P38344 393 aaPredicted RBP6.45□□□□□ -1.38
CDC34YDR054C YER186CP40101 306 aa6.45□□□□□ -1.38
CDC34YDR054C YIL165CP40446 119 aa6.45□□□□□ -1.38
CDC34YDR054C GZF3P42944 551 aaKnown RBP6.45□□□□□ -1.38
CDC34YDR054C GCV2P49095 1034 aa6.45□□□□□ -1.38
CDC34YDR054C DRN1P53255 507 aaKnown RBP6.45□□□□□ -1.38
CDC34YDR054C GYL1Q04322 720 aa6.45□□□□□ -1.38
CDC34YDR054C CDD1Q06549 142 aa6.45□□□□□ -1.38
CDC34YDR054C TSR1Q07381 788 aaKnown RBP6.45□□□□□ -1.38
CDC34YDR054C SFI1Q12369 946 aa6.45□□□□□ -1.38
CDC34YDR054C PCD1Q12524 340 aa6.45□□□□□ -1.38
CDC34YDR054C YPR015CQ12531 247 aa6.45□□□□□ -1.38
CDC34YDR054C SNF1P06782 633 aaKnown RBP6.44□□□□□ -1.38
CDC34YDR054C COX11P19516 300 aaKnown RBP6.44□□□□□ -1.38
CDC34YDR054C POT1P27796 417 aaKnown RBP RIP-Chip data6.44□□□□□ -1.38not detected
CDC34YDR054C NAB2P32505 525 aaKnown RBP RIP-Chip data6.44□□□□□ -1.38 RIP-Chip
CDC34YDR054C GYP6P32806 458 aa6.44□□□□□ -1.38
CDC34YDR054C MRT4P33201 236 aaKnown RBP6.44□□□□□ -1.38
CDC34YDR054C NCL1P38205 684 aaKnown RBP6.44□□□□□ -1.38
CDC34YDR054C CBR1P38626 284 aaKnown RBP6.44□□□□□ -1.38
CDC34YDR054C BUD16P39988 312 aa6.44□□□□□ -1.38
CDC34YDR054C ALD5P40047 520 aaKnown RBP6.44□□□□□ -1.38
CDC34YDR054C EMP65P40085 556 aa6.44□□□□□ -1.38
CDC34YDR054C GPP2P40106 250 aaKnown RBP6.44□□□□□ -1.38
CDC34YDR054C ESL1P40456 1118 aa6.44□□□□□ -1.38
CDC34YDR054C CEP3P40969 608 aa6.44□□□□□ -1.38
CDC34YDR054C PHO86P46956 311 aa6.44□□□□□ -1.38
CDC34YDR054C BRO1P48582 844 aa6.44□□□□□ -1.38
CDC34YDR054C STB4P50104 949 aa6.44□□□□□ -1.38
CDC34YDR054C KAP114P53067 1004 aa6.44□□□□□ -1.38
CDC34YDR054C BTN2P53286 410 aa6.44□□□□□ -1.38
CDC34YDR054C YNR063WP53749 607 aa6.44□□□□□ -1.38
CDC34YDR054C ALG11P53954 548 aaKnown RBP6.44□□□□□ -1.38
CDC34YDR054C VPS60Q03390 229 aa6.44□□□□□ -1.38
CDC34YDR054C RRB1Q04225 511 aaKnown RBP6.44□□□□□ -1.38
CDC34YDR054C YMR114CQ04471 368 aaKnown RBP6.44□□□□□ -1.38
CDC34YDR054C YDR222WQ04925 415 aa6.44□□□□□ -1.38
CDC34YDR054C YLR455WQ06188 304 aa6.44□□□□□ -1.38
CDC34YDR054C SGT2Q12118 346 aaKnown RBP6.44□□□□□ -1.38
CDC34YDR054C GAL10P04397 699 aa6.43□□□□□ -1.38
CDC34YDR054C PET111P08468 800 aa6.43□□□□□ -1.38
CDC34YDR054C STE11P23561 717 aa6.43□□□□□ -1.38
CDC34YDR054C SEC21P32074 935 aaKnown RBP6.43□□□□□ -1.38
CDC34YDR054C YKL077WP36081 392 aa6.43□□□□□ -1.38
CDC34YDR054C AGP2P38090 596 aa6.43□□□□□ -1.38
CDC34YDR054C YHL026CP38740 315 aa6.43□□□□□ -1.38
CDC34YDR054C YHR054CP38780 354 aa6.43□□□□□ -1.38
CDC34YDR054C YEL075CP39972 122 aa6.43□□□□□ -1.38
CDC34YDR054C YTA12P40341 825 aa6.43□□□□□ -1.38
CDC34YDR054C MNN11P46985 422 aaKnown RBP6.43□□□□□ -1.38
CDC34YDR054C PRP31P49704 494 aaPredicted RBP6.43□□□□□ -1.38
CDC34YDR054C HNT2P49775 206 aa6.43□□□□□ -1.38
CDC34YDR054C ALT1P52893 592 aa6.43□□□□□ -1.38
CDC34YDR054C CAF120P53836 1060 aa6.43□□□□□ -1.38
CDC34YDR054C YNL134CP53912 376 aaKnown RBP6.43□□□□□ -1.38
CDC34YDR054C SPO71Q03868 1245 aa6.43□□□□□ -1.38
CDC34YDR054C YLR352WQ06479 807 aa6.43□□□□□ -1.38
CDC34YDR054C YDR056CQ12025 205 aa6.43□□□□□ -1.38
CDC34YDR054C YOR022CQ12204 715 aa6.43□□□□□ -1.38
CDC34YDR054C PUS1Q12211 544 aaKnown RBP6.43□□□□□ -1.38
CDC34YDR054C YPR071WQ12346 211 aa6.43□□□□□ -1.38
CDC34YDR054C CHS1P08004 1131 aa6.42□□□□□ -1.38
CDC34YDR054C YER152CP10356 443 aa6.42□□□□□ -1.38
CDC34YDR054C CSE2P33308 149 aa6.42□□□□□ -1.38
CDC34YDR054C SPC29P33419 253 aa6.42□□□□□ -1.38
CDC34YDR054C PEX5P35056 612 aa6.42□□□□□ -1.38
CDC34YDR054C SPT23P35210 1082 aa6.42□□□□□ -1.38
CDC34YDR054C HEL1P36113 551 aa6.42□□□□□ -1.38
CDC34YDR054C BIT2P38346 545 aa6.42□□□□□ -1.38
CDC34YDR054C RCK2P38623 610 aa6.42□□□□□ -1.38
CDC34YDR054C HIS2P38635 335 aa6.42□□□□□ -1.38
CDC34YDR054C FAF1P40546 346 aaPredicted RBP6.42□□□□□ -1.38
CDC34YDR054C GUS1P46655 708 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
CDC34YDR054C ASG7P46993 209 aa6.42□□□□□ -1.38
CDC34YDR054C YGR111WP53265 400 aa6.42□□□□□ -1.38
CDC34YDR054C GTR1Q00582 310 aa6.42□□□□□ -1.38
CDC34YDR054C CTF3Q12748 733 aa6.42□□□□□ -1.38
CDC34YDR054C BI2P03873 423 aa6.41□□□□□ -1.38
CDC34YDR054C BI4P03879 638 aa6.41□□□□□ -1.38
CDC34YDR054C RPS3P05750 240 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms