RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeastyeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPO21YDL140C TUB2P02557 457 aaKnown RBP3.88□□□□□ -1.79
RPO21YDL140C LYP1P32487 611 aa3.88□□□□□ -1.79
RPO21YDL140C BAT1P38891 393 aaKnown RBP3.88□□□□□ -1.79
RPO21YDL140C ASG1P40467 964 aa3.88□□□□□ -1.79
RPO21YDL140C SEC27P41811 889 aaKnown RBP3.88□□□□□ -1.79
RPO21YDL140C MDJ2P42834 146 aa3.88□□□□□ -1.79
RPO21YDL140C ELP2P42935 788 aa3.88□□□□□ -1.79
RPO21YDL140C TY4A-JP47023 414 aa3.88□□□□□ -1.79
RPO21YDL140C YJR124CP47159 448 aa3.88□□□□□ -1.79
RPO21YDL140C CUE3P53137 624 aaKnown RBP3.88□□□□□ -1.79
RPO21YDL140C ENT5Q03769 411 aaKnown RBP3.88□□□□□ -1.79
RPO21YDL140C ECM38Q05902 660 aaPredicted RBP3.88□□□□□ -1.79
RPO21YDL140C RTC5Q12108 567 aaKnown RBP3.88□□□□□ -1.79
RPO21YDL140C COX6P00427 148 aa3.88□□□□□ -1.79
RPO21YDL140C TKL2P33315 681 aa3.88□□□□□ -1.79
RPO21YDL140C GDH2P33327 1092 aaKnown RBP3.88□□□□□ -1.79
RPO21YDL140C MRX3P38172 270 aa3.88□□□□□ -1.79
RPO21YDL140C PHO88P38264 188 aaPredicted RBP3.88□□□□□ -1.79
RPO21YDL140C CEP3P40969 608 aa3.88□□□□□ -1.79
RPO21YDL140C LSC2P53312 427 aa3.88□□□□□ -1.79
RPO21YDL140C YPR003CP53394 754 aa3.88□□□□□ -1.79
RPO21YDL140C ECM30Q06673 1274 aa3.88□□□□□ -1.79
RPO21YDL140C NDJ1Q12366 352 aa3.88□□□□□ -1.79
RPO21YDL140C MHF2Q3E829 80 aa3.88□□□□□ -1.79
RPO21YDL140C COX2P00410 251 aa3.88□□□□□ -1.79
RPO21YDL140C CWP1P28319 239 aa3.88□□□□□ -1.79
RPO21YDL140C SOF1P33750 489 aaKnown RBP3.88□□□□□ -1.79
RPO21YDL140C ATP3P38077 311 aaKnown RBP3.88□□□□□ -1.79
RPO21YDL140C ALG3P38179 458 aa3.88□□□□□ -1.79
RPO21YDL140C SHU2P38957 223 aa3.88□□□□□ -1.79
RPO21YDL140C MET18P40469 1032 aa3.88□□□□□ -1.79
RPO21YDL140C KTR7P40504 517 aa3.88□□□□□ -1.79
RPO21YDL140C IDS2P46958 469 aa3.88□□□□□ -1.79
RPO21YDL140C TRF5P48561 642 aaKnown RBP3.88□□□□□ -1.79
RPO21YDL140C YGR273CP53329 174 aa3.88□□□□□ -1.79
RPO21YDL140C YLR177WQ06251 628 aa3.88□□□□□ -1.79
RPO21YDL140C DDC1Q08949 612 aa3.88□□□□□ -1.79
RPO21YDL140C YDR262WQ12331 272 aa3.88□□□□□ -1.79
RPO21YDL140C RGS2Q99188 309 aa3.88□□□□□ -1.79
RPO21YDL140C MSW1P04803 379 aa3.88□□□□□ -1.79
RPO21YDL140C POP4P38336 279 aa3.88□□□□□ -1.79
RPO21YDL140C RTC3P38804 111 aaPredicted RBP3.88□□□□□ -1.79
RPO21YDL140C GIM4P40005 111 aaKnown RBP3.88□□□□□ -1.79
RPO21YDL140C YJR098CP47139 656 aa3.88□□□□□ -1.79
RPO21YDL140C MNT4P53745 580 aa3.88□□□□□ -1.79
RPO21YDL140C SXM1Q04175 944 aaKnown RBP3.88□□□□□ -1.79
RPO21YDL140C YFR010W-AP0C5N0 62 aa3.88□□□□□ -1.79
RPO21YDL140C PRP6P19735 899 aaPredicted RBP3.88□□□□□ -1.79
RPO21YDL140C KRR1P25586 316 aaPredicted RBP3.88□□□□□ -1.79
RPO21YDL140C CIN8P27895 1000 aa3.88□□□□□ -1.79
RPO21YDL140C PYC2P32327 1180 aaKnown RBP3.88□□□□□ -1.79
RPO21YDL140C MEI5P32489 222 aa3.88□□□□□ -1.79
RPO21YDL140C DIA4P38705 446 aaPredicted RBP3.88□□□□□ -1.79
RPO21YDL140C LIN1P38852 340 aaPredicted RBP3.88□□□□□ -1.79
RPO21YDL140C PNT1P38969 423 aa3.88□□□□□ -1.79
RPO21YDL140C SDS3P40505 327 aa3.88□□□□□ -1.79
RPO21YDL140C CAB2P40506 365 aa3.88□□□□□ -1.79
RPO21YDL140C RET2P43621 546 aa3.88□□□□□ -1.79
RPO21YDL140C NOP19P53317 196 aaPredicted RBP3.88□□□□□ -1.79
RPO21YDL140C UBX5Q06682 500 aa3.88□□□□□ -1.79
RPO21YDL140C YPL191CQ08930 360 aa3.88□□□□□ -1.79
RPO21YDL140C GPM2Q12008 311 aa3.88□□□□□ -1.79
RPO21YDL140C CDC8P00572 216 aa3.87□□□□□ -1.79
RPO21YDL140C RPS8AP0CX39 200 aaKnown RBP3.87□□□□□ -1.79
RPO21YDL140C RPS8BP0CX40 200 aaKnown RBP3.87□□□□□ -1.79
RPO21YDL140C SUI2P20459 304 aaKnown RBP3.87□□□□□ -1.79
RPO21YDL140C NAR1P23503 491 aaKnown RBP3.87□□□□□ -1.79
RPO21YDL140C GBP2P25555 427 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
RPO21YDL140C YUR1P26725 428 aa3.87□□□□□ -1.79
RPO21YDL140C LTV1P34078 463 aa3.87□□□□□ -1.79
RPO21YDL140C EDC3P39998 551 aaKnown RBP3.87□□□□□ -1.79
RPO21YDL140C YER158CP40095 573 aa3.87□□□□□ -1.79
RPO21YDL140C ATM1P40416 690 aa3.87□□□□□ -1.79
RPO21YDL140C INP51P40559 946 aaKnown RBP3.87□□□□□ -1.79
RPO21YDL140C TIM54P47045 478 aa3.87□□□□□ -1.79
RPO21YDL140C DSL1P53847 754 aa3.87□□□□□ -1.79
RPO21YDL140C BET4Q00618 327 aa3.87□□□□□ -1.79
RPO21YDL140C PET117Q02771 107 aa3.87□□□□□ -1.79
RPO21YDL140C AIM33Q04516 312 aa3.87□□□□□ -1.79
RPO21YDL140C EAF1Q06337 982 aa3.87□□□□□ -1.79
RPO21YDL140C YLL007CQ07799 665 aa3.87□□□□□ -1.79
RPO21YDL140C ABP140Q08641 628 aaKnown RBP3.87□□□□□ -1.79
RPO21YDL140C CMD1P06787 147 aaKnown RBP3.87□□□□□ -1.79
RPO21YDL140C SCH9P11792 824 aaKnown RBP3.87□□□□□ -1.79
RPO21YDL140C DCC1P25559 380 aa3.87□□□□□ -1.79
RPO21YDL140C EMC1P25574 760 aa3.87□□□□□ -1.79
RPO21YDL140C LST4P34239 828 aa3.87□□□□□ -1.79
RPO21YDL140C IAH1P41734 238 aa3.87□□□□□ -1.79
RPO21YDL140C ROG3P43602 733 aa3.87□□□□□ -1.79
RPO21YDL140C DUG1P43616 481 aaKnown RBP3.87□□□□□ -1.79
RPO21YDL140C MAL12P53341 584 aa3.87□□□□□ -1.79
RPO21YDL140C TMA64Q04600 565 aaKnown RBP3.87□□□□□ -1.79
RPO21YDL140C DIN7Q12086 430 aa3.87□□□□□ -1.79
RPO21YDL140C ARO1P08566 1588 aaKnown RBP3.87□□□□□ -1.79
RPO21YDL140C RPL7AP05737 244 aaKnown RBP3.87□□□□□ -1.79
RPO21YDL140C TUP1P16649 713 aa3.87□□□□□ -1.79
RPO21YDL140C YCL042WP25572 119 aa3.87□□□□□ -1.79
RPO21YDL140C SPB4P25808 606 aaPredicted RBP3.87□□□□□ -1.79
RPO21YDL140C SEC1P30619 724 aaKnown RBP3.87□□□□□ -1.79
RPO21YDL140C RME1P32338 300 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms